Map Locations of contig_6605 (5768 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location No map location




Predicted Genes from contig_6605

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_74533 1 1770 bp MLOC_74533.1 Available Available LOC_Os03g50885.1, FRAME:-1, EVALUE:0.0, 13103.m12851 protein actin, putative, expressed





CDS Structure of MLOC_74533






Contig Sequence (5768 bp)

>contig_6605 5768 assembly3_WGSMorex_rbca.fasta
GGGCACCAGAACGTGCCCCAGATGCCTCTAATCATTGACCAACTATAATTTGTTCACCAC
ACCACATTTATCTGCTTGGAGAGATGCCTCTAATGACCCTATGGCCCCCTCGGTCTATCT
TCCTTTATGGAATACACGTTGCAATTTCTTTTCTTTGTTGTATCATTTTATTTTGATATC
TATTTATTAATTCCTACCATACCATACAATTTATCCTTGTAACTAACAGGACAAGAAGCT
TGACAACCTTCTTGAAGCGTCGGGGGTAAGTCTGTTTTGTGTTTTATGTGCAGGTACTCA
AGAATTTAGTTACAGAAGAAATCCCTAGTGGTTCGATAATTCTTGGTGCTCAATTGAGAA
AAATAGTCATTACTAAGTTACTTCACCACTACAATTGGGAGCTACCCAACCACTTGTATG
AGATAGCAAACATGCTCCATGCACGGCAACCACGATCGGCACAAGCAAGCACGGCCGCTG
CAGGCTAAAGCCGCCGACAGATGGGTCTGTCTGGCCCATTGCACGCGGGGCAACGTGGGA
CAACACACGTGGGTGCGCCCGAAGCCGTCCCACGACAATGGTCCATGTGCTCCCGCGGTC
CACCCGTCATGGATCCCCGAGGCGTGTCGCTCAGGTGCACGTCGTCCACGCGGATTAGAC
GTTGCATGGAGCCCCTCAGAGGCCCCTGCGGCATGCGGTCGTGAAACAGGCGGCGTGGAG
AGCATTATTCTCTACGAAGACACCGAGGAGGTGGGTACTCTATCATCTTTTGTAGAAGTA
ACATTTTCTAGCATTGTGGCGCACCTCATATATACGTTGTGAGGGGACAAGACTTTGCTA
ACACTAAGAATTTATGTGTGGATGCTAACTTTGTTAATAAAATTGTACATGGTCTTATAA
TGGATTCAGGAAACTCGGTACGAAAGGAAAACATGTGCATATGAATATATCTCCAAAGTC
TTTGGATCAATAACTAATCTTTAATTTGCTAACTTCAATGAATTATGGTTGGGCATGAAA
GACAACTAAGTGAACATGGATATGTGATCACAGGTTGAAAATCATTACACACAAGCCCTC
CGACAAGCATCGTTTACTTAGAGCCTTTCTAGCCAAAACTATTTGTGTTAAGCATGAATT
TTGCTTTTAGATCCATAACCTCAGCCCCACAAGTGTTCACTATACCTGCCTATGTGACTC
AGTAAGTTCACTCCAAGTAAATTGTCATCGTCGCATGCAACACATCACTAAAACTTACCC
GTTTAAGTTTTTATTTTGTGGTAATGACAATTCTCCATGAACTTTGATCGGGAGAAGGGA
TAAAAAACAAAGCAGACACCATCACAAGTGGCAATGGGAAATTATCGTTTCAATGTACTA
AACTCTTGAATGTTCAACAAAAAATGCATGACAATCTCGGCTTCCATCTGCAGAGAGCCT
TTCTTCTACTTTTATGTTGAGTCAATCCTTTCTTCAAACCTATTGTTTTAGCGTAAACTT
TGCTTGTTGGAGTGAGACCTATGCCTGATGGTTACTATGACCATATGCATAGCATGTTTA
CCTAAGTTGACATAATCTTTATGATTCACGTGATAAGCCAAAGCAAAGCATTTCACTCTA
AACTTTGATCTTCTCATGCCTAGCTATAACCTTGCATTCTAAAGATTTGCTCACTTGAGT
GATAGTCCTTATTGAAAATGACAAAAGAGATGGTTGAGCATATGTCACTTGCTTATTTAA
AGCTCCGTCATAGACCTTTCTTGGAGAATTAAGATGAAAGAAATCATTACATGATCTAGA
TTATGGTCAAACCTCTTGCATAACATCCAAACTTAAAGTATCCGGTGCTTGGTAAAACTG
TAATGACCTCAAGATCGGGTGCTTCTATTTTTAGTGTTGTTGTGTTAGCATGTGTAAAAT
GCTTTTGTAATTTGTGATTGATGCATGCTCGTATTTTATTATCGACCTCTTACTTTTACA
TGAGGGCAAGCAAAGGTCTAAGCTTGGGGGGCTGATACATGCATTTTGCATCACATTTTT
ACAAGATAAATACTCTATGTCATTTCAATTATTAGTGATTAACAAACAAGGTGAAACGAT
AATCGCTGAAAATCTTCGAGATGTACATTTTAAGCGAGGATACAAATGAGTGTAAAAACC
ACTCACCAACATCCCCAAGGTTAAACCTCGATCGTTCTCAAGCGGGCAACATCGATCGTA
GGGAACTCGGCGTTTAACGTGTAGATAGCACATCGCTTCTTTCACCTGAAAACTTAGCAT
AGCTAGAGGCAAGGTTATTATACAAGCTTTGTTAGTCCAGGACGGTTAGAATAAAATATT
CATTGGCATAAATAAAGTAGTCCCTCCGTTCCTAAATATAAGATCTTTTAGAGATTCTAT
TATAGACTACATACGAATGAATATAGACATATTTCAGAGTATACATTCACTAATTTTGTT
CCTTATGTAGTCCACGCTGAAATCTCTAAATTGTCTTATACCCCCTCTGTAAATTAATAT
AAGAGCATTTAGATCACTACTTAGGAAAGGAGGTAGTAGCTAGCTAGCTACCATTCTATT
TCATCTACCTAACACTTGCTTGCCCGAAACAGTTGAAATAACTTGGTAAACTTGTATTAG
AAGAATGAAGGCATGTCAATAATAATAAAAGCATAGCATAGCGTTAGAGTATCGCATTAA
CAACTCACAGGTATCATCAGTAGATAAAGACGCTTCTCCTATTATATTTTTCTGAACTTT
CTATCTCTGCAAGACCATGTCAAAAAATGATATGCCAGGCCGGCAAAAAAATTAGTCCAC
ATTGGACCAGATCAGGTCTTTTAAGCGATAGCATACCTGTCAAAGCGATGACAGCAGATA
GAAGAATCATCCCAATTGGCGCCAACCTGTGAGATTCCAAGTATTCCTAATAAACTAGCA
ACAGGTGCAAATCATGGCATCACATTCAAATGGTCCCGTTCTCCCCTCGCATCTTGCTTG
AGGAAAAGAGAGAAGATTCCACTTTTTACAGGAATGTCTTGTACGGCACTACGACAGGCC
AGGCAGCAAAGCGGAATCATGTAGCCATGCGCTGCTAAAGCCAGGCAGCAAGAGAATTCT
TTGCCATGACCCATGAATATTCCAGCACATCGATCAAGAAAAGATGGCATCAGATCAGAT
CTAGTGGGGTGGTAGAACCCACTGTGCAAAGGCACACTACAGATCACAACACTCACCATT
TCAAACAGATTGCTATTGAAAGCTACTCACTCTGTCCTAAAATGCAAGACGTTTTTTGAC
ATTATCGTAGTATCAAAAAACGTCTTACATTTCACGACGGAGGGAGTAATTAGCAGAGGA
TTCCTTTCAAAAAGAAAAATAGCAGAGCATTTGGTTGTAGGGTCGAAATGAACTCAACAA
GATACAACATTGCTTGCACAGCAAAACCTTTATGGGACAACACCATGTAGGATCAAGACA
ATTCATATTATTCATTCATTTAACAGGGTAGTGATGACACATGACAAATGAAATCAAAAA
CACCAGCCGTATTTCTCTAGTAGCCTCACCAGGCATCTGATTAAATTTGATTGAATAAAC
CGAACTCATGTGTCCAAAATCACGAGGGACAAGCACAAGTAGCAATAGATATTACAGTCT
TTGAATAGGAGAAAACGGTAACCGGTAGGCCAGCCGAAAACTTTGTCCACGCTAACGAAG
AAACAGCAACAAAAGAGGGAGGCGAAGCGGCAGGAGGGTCGCGATAAAGGCTCCTCCTGG
CTTTCATTCTTGGGTCCGAAGAATTAGAAGCATTTCCTGTGCACGATGGATGGGCCAGAC
TCGTCGTACTCAGCCTTTGCAATCCACATCTGCAACAACAACCAAGCAACACTGTAAGCA
AAGAAACGAAATATCCATGAATGAAATGAATGAAGCACGATGCTGTAATGTTTATTTACC
TGCTGGAAGGTGCTGAGAGATGCCAAGATGGATCCTCCGATCCAGACACTGTACTTCCTT
TCAGGAGGAGCAACAACCTTAATCTTCATGCTGCTAGGAGCCAAGGCAGTGATCTCCTTG
CTCATCCTATCAGCGATTCCAGTGAACATAGTGGTACCACCACTAAGAACAATGTTGCCG
TACAGATCCTTCCTAATATCCACGTCACACTTCATGATGGAGTTGTAGGTGGTCTCATGG
ATACCTGCAGCTTCCATCCCGATGAAGGATGGCTGGAAGAGGACCTCAGGGCAACGGAAA
CGCTCGGAACCAATGGTGATAACCTGCCCATCAGGAAGCTCGTAGCTCTTCTCCACAGAA
GAGCTGGTCTTGGAAGTCTCCATTTCCTGGTCGTAGTCCAGTGCAATGTAGGACAGCTTC
TCCTTCACATCCCTCACAATTTCCCGCTCAGCAGTGGTGGTGAATGAGTAACCACGCTCA
GTGAGGATCTTCATGAGGTAATCGGTGAGATCACGCCCAGCCAGGTCAAGACGGAGGATA
GCGTGGGGAAGAGCGTATCCTTCGTAGATGGGGACAGTGTGGCTGACACCATCTCCCGAG
TCCAGCACAATACCTGAGGAGTTCAATGAGGTACATCGAGTTATTGATAAAATTAAAAAA
TGTGTTGAATTGACAGTGTGGGAGAGGATGACAATTAACTGCCTATCAGGTTTGGTTGAA
AAATATTTACCACATGTCATAGAACAAAACTAGTGCTACACAAAACAAATTGACAGATTT
TACAGATTAATCTCGTCTACATGTGAACATGCTAAATTCCAGGATTCCTAATTCAAAAGA
AGAGCTGAATATAGATGAGCTCACCTGTGGTACGACCACTGGCATACAGCGAGAGGACGG
CCTGGATGGCGACATACATAGCAGGAGTGTTGAAGGTCTCGAACATGATCTGGGTCATCT
TCTCACGATTGGCCTTGGGGTTGAGCGGCGCCTCAGTGAGAAGGACGGGGTGCTCCTCTG
GGGCGACACGGAGCTCGTTGTAGAAGGTGTGATGCCAGATCTTCTCCATATCGTCCCAGT
TGCTGACGATACCGTGCTCAATGGGGTACTTGAGAGTCAAGATACCCCTCTTGGACTGCG
CCTCGTCACCGACGTAGGCGTCCTTCTGCCCCATCCCGACCATGACACCGGTGTGGCGTG
GGCGGCCCACGATACTGGGGAAGACAGCCCTGGGAGCATCATCTCCAGCGAACCCAGCCT
GCAAGCATCATCACCACCACAAGTGTTATGTCACAAAGAGCACTGCGGCATTTCCCTGAA
CCAAAGATGCAAGAACGCTCGTGGGATGCAGCGGCTCACCTTGACCATACCGGTACCATT
GTCGCAGACGAGGGGCTGGATGTCCTCGGCGTCAGCCATTTTCTACCTACAGCAGAAGCT
CGCAGGAAGCCACGGTTATTATTACACATCGATCGGTCGATCAAAGGAGAATCTACGCAT
CCTAGCAGTGAAGGACGCTGGCTAAATAAATGCAGAGATTATTATTTTTCTCCTTCGAAG
AAACATGATGAGTAGTACTATCAATCAGTTCACGAGGAACCCCTAACCGCAATGGCTGGC
ATGTTAACCGCGAGGCTTAGCGACAAGAACAGTTAATAAGGGAACAGAGAGAGCATGGTT
CTCTGGCACCGCGGCGCGGATCGGAGCGCTCCGGCACCCGAAACGGCCCAGATCGCGGGC
GGCAGATCTACATTCCCGCGGCGGCACGAAAATAAAAAAAAACGCGGCGGGCGCTCGCTC
GCTCCCAT