Contig Data
morexGenes
Links



Map Locations of contig_66029 (5330 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_66029

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_74527 1 370 bp MLOC_74527.1 Available Available None
MLOC_74526 1 2026 bp MLOC_74526.1 Available Available LOC_Os04g58390.1, FRAME:+3, EVALUE:4e-113, 13104.m06130 protein allantoinase, putative, expressed





CDS Structure of MLOC_74527






CDS Structure of MLOC_74526






Contig Sequence (5330 bp)

>contig_66029 5330 assembly3_WGSMorex_rbca.fasta
CGTCGTTTAGACTTGGTTTTGTTTAGTTTACAAGTTCTCCATAGCTGCAACNNNNNNNNN
NNNNNNNGTGTTCCACGACCAGACAAAGGCGTCACAACGCCCCACTTTCATCAATAAAAC
TTTTCTTTTATATTCGTAATATCCAAATTGCAATCTTAGTTTTTTGCTTGTTCTTCGTTT
GCGTGCAGGAAACATAACCTCGTGGTCAGGTTGATCGTACTTCGATGTGGTCAATAACCT
CTCGGAGTTGGATTGACGATTGCTAAGACGCGACGTCCTCACACATTCGTAGTCAGATTG
TTAAAGTCTACTACACCAAAACGATAATCATCATCTCGTCGAAAGATAGAGACACTTTAC
CTCTATCAGGTCGTGCAAGTACAAAATGTACAAACAACTTGTCACAAAAGAAGCACCGAA
AATGCATTCATAATGAAACGGACCAAAATATGCCGGTAATGTTAGATTTTCAAGCATGGC
AAATCAAACAACGTTTTTGAATGCCAAGTAGTGTTCGTTGAGGATGACAAACTTAGCTGA
CGAGCATGACAAATCCATCACTATATCACACTATTATAAACTGTCATGAAAAACGTTTTA
ATTTGTCATGTCTACAAAATTGACGACGGATTTTTAGCTTTTCCGTGAAAAATGGATTAA
CCATTTTCGGTCGGGTGAACGTGGCCAGCACGAGCCGTCGCTTCCCAAGCCTCCAAGGCT
CCAGGTGCCGGGAAGGGGCAGCCAATGAAGGGCCGTCACATGACCTCCGCCCGCACCAGA
ATCTCCCATTTATTTTTCTCCCAACGGAAAGGAATCTCGTGTGCCTTTTTTTTGACGCTT
ACTTATAAAAAGATTCCAAATCCCCGTGGGCCCCGGCCACTTGGAGGGATCCAGCCAGCG
CCCAGCAACGACGTACCCGAACAAACTCCGTCCCCACGCCCCTCCCAGGACCCGGTCCAC
CGAACCCTCCCCCTCTCTACCCCGGGCCCACAATAACCGGTAATCTCCCCTGTCCAGTGC
GCCGGGTTCGCGGAGCGGTGCACCGAACCCCGCGCGTCCGCATCGGCCGCGCACGCAAGT
CGCCTTGGCCAGTGGTGGCCGCGCACGGGACCGAGGCGACGCACGCAGACGCGGCCGGAC
AGGACTCTCGCCATCAGGAGAGAGATAGAGAGGTAGGGGACGAGCGATGGCGGCTGGGAA
GGGCCGGGTGCTGCCGCTGCTGGCCGTGGCGGCGGCGCTCGCCGCCGCGCTCCTCTACAC
CGCGCCCTTCTCCAAGGTCAGCGCCCTCGAATCTGCATGCGGCTGCGGTTGCACGGTGGC
GGGGACTGACGAGTGTTTCTGTTGCGCGTGCAGAGCCTGGGCGGCGAAGGGTGCAGCCTG
CTCCCGCACGGCCACTTCTGGATCGCCAGCCAGCGGGTCGTCGCGCTCGGCCGCGTCGGC
CCCGCCGCAGGTACTCCGCCCCCCTGCCGTTGCGCCTCCGTCGTCCCGGCGTTCACGGTT
GACCCCCGCGCTTCCGTCCATATCTGGTGGAAGCAAATGCGCGAGAAAGAAAAAGTCAAA
AGCTGATACGTGATTGGCGTGTCTGTGCGTGTGTGCAGTGGAGGTGAAGGAGGGGCTGAT
CAACGCCATCGCCGTCGGGGACTACCGGAGCTTCGTGCTCCGCCGCCCGCTCGTCGACTA
CGGGGACGCCGTCATCATGCCCGGCCTCATCGACGTGTAAGCCAAACAAACCGTCACTCA
CTGTCTGATCTCTCAAGATAAATTACTCGATCGCCTCGAGTTTCATGGTGGCGTTGTACC
TTCAGGCACGCGCATCTCGACGAGCCCGGGCGGGCGGAGTGGGAGGGCTTCTCCACCGGC
ACAAGAGCCGCCGCCGCAGGTGTGAATCCGTTATAATTTATTACTAGCTCAGAGCCACAC
TCCAAAGCACTTGGGCCTGTATCTGTCTGTGCTAATCAGGATTCAGAAGCGACCTAATAT
GCTAAGTAGCCATCATTAAGTTAACTAATAACAGACTGTACAGTATATAGCAAGCAACAT
TACCGGATTACGACTGATTTGGCAGGATTTGGTAANNAGAAGTATTCTCTCTTGCTGCAT
ACACTAGTCCTGCAAATTAATTCCTCCATTTTCAGGTGGCATAACTACGTTGGTGGACAT
GCCTCTCAACAGCTTCCCCTCAACGGTCTCTGAAGAAACTCTTAAACTCAAGGTTCAGAG
TGCTTCTCTTTGGACGCAGTTACATCAGTACTTAGTACACTAGCCCATAACGTGCACATG
GTTCCTCCCAGCCTTTTCTGTTACTAACACCAACATCAACATGCTTGATTATCAGGTGGA
TGCAGCTCGGGATAAGCTATATGTTGATGTCGGTAAGTGGAGCGGTTCACTACCATGCCA
AACTGGCAATGTCAAGAGTCAGAACAGTGAATTTATTTTATCTACTATGCGCATAGGATT
TCAGCATTTTTGCTTTGTTTTTGAACCCTAATGCTTTGTCTGAATCTGTCTCATATGTCA
TATCTGACTTGCTTGCACTCTCATATAGGGTTTTGGGGAGGCCTTGTACCCGAGAACGCC
TTGAACCCAAGCAAATTGGAGAGCCTGCTAAATGCAGGAGTGTTAGGGCTTAAGGTTTGT
TTCTAAACTAGCAGACAGGCCTCATCAATTCTGGTTCACATTATTGTTTTCCTCTGTTCC
TTCCTTCCTTTTATAAAAAAAAGAATTGACACTAGAAGGAGAAACTGACAATATTGTTTT
ATTCTAGTCTTTCATGTGCCCCTCTGGTATCAACGACTTCCCCATGACAAATTCAACTCA
TATCGAGGTGCGCTGCTTTATCAATGCTGTCATGTTTTTCTTGGCATCGACAAGATTTTC
ATAATTCTGCTTACTGAACTTTCTAAAAGAGCATCGTATTATTTTCGCACTGTAGGAGGG
CCTAGTTACATTGGCAAAGTACAAGAGACCCTTGCTTATCCATGCAGAACGCATACCGGA
TGTCGCGAGTGATGAGGAGCTTGATGGTGAATTGGATCCTCGATCATACGCAACATACCT
GAAATCTAGAACACCTGCATGGTAATTTGCATTGTCTCAAATGTAACTGGATTTTACTCT
CTCTGAGCTGGAGATAGCTTCATGTTTTCTATTGGGTGTAGAATTCAGATGAATGAATTA
CTGAGATTCACTAATTTATTTCTGTTTTCTCTTATACCCAGGGAGGAATCAGCCGTTAGA
GATTTGAAACGTGCCATGAAAGACACTGAAGTGGGGGGTCGGTCAGAAGGAGCTCATCTT
CACATTGTTCATCTCTCAGATTCAAAAACTAGCCTCAGGCTTCTAAAGGTATGACGCGAC
ATACTAGTTTACCCACCATTTCCTCGGTTCTCTTGGTCGGCGTTTGACCGATATGTTTTG
TGTTTGTAGGATGCAAAACACAGTGGCGCAAAAGTCACTATAGAAACCTGTCCTCATTAC
CTCGCATTTTCGGCTGAGGAAGTTCCAGACGGAGACACTCGTTTCAAGTGCTCTCCTCCC
ATACGTGATGCTGCCAACAAGGAAAACCTCTGGGAAGCTCTGCTTGTAATGCCATTTCCC
ATCCTTTCCGATTCCGACTCGCTGCAATCTTGTGATTAATAGTTCTAGCTAGGCTAACTT
TTGCGTGAACGAATGCCAGGACGGGCACATCGACATGCTCAGCTCAGACCACTCGCCGTC
GACTCCTGATCTCAAGCTAATGGAGGAAGGCAACTTCATGAAGGCATGGGGAGGTATCTC
ATCTCTGCAGGTCAGTTTGTGTAAGCACGAACATTTTTCAGCAGAATCACAATGCCAAAC
TACTTCATACATAGAGAAAAGATGCGAATTCACAGTGTTTTCCCCACAAATTTCTGCAGT
TTGTCCTCCCTGTAACATGGTCACACGGGAAAAAGTATGGCATCACCCTGAACCAGCTAG
CCTCATGGTGGAGCGAGAAGCCCGCCGAGCTCGCGGGGCAGAAGAACAAGGTAAGCAGTG
CATCTAATAACACAGAGATCGGGGGAGTTGCACTATCCGAAAGAAAAATAAAACAGAAAC
AGTACATAGCATATTTACATTTTCAAAAAAGCAATGTTGGTTGCAAATGATTGGATTCAA
ACCATGAAACTCAAGAGCTGTGCTTGTTTGCGCAGGGGTCTATTCTGCCGGGGTACCATG
CCGACATTGTGGTGTGGAATCCCGAGGCACAATTCCATCTCGACGACAGCCATGCCGTAT
ACCACAAGCACCGGGTTAGTTCCCCAACTACAAAAAAAACATGAATGTTTACACTGCTAC
AACGGTCCTACAAAATTCAAAAAGAAACCAAACCGACCGCGCATTTTGTCTGCAGAACAT
CTCGGCGTACCTTGGGAATGAGCTATCGGGCAAGGTCCTGTCGACATTCGTGAGGGGGAA
CCTAGTGTTCGCCGAAGGAAAGCACGCTGGGGCCGCCTGCGGCGCCACCATCCTCGCCAA
GTAAAACCGTAGAGCTAGAATGTTGTTGCCGATTTCTAGCGTATATGATCGTGTGCGCTT
GTGTAGTATGTATGTGTGCAGGTCTGTAGTTGTTTCCCTGTGTATAATTTGGATCCATCG
CATGCATCCATCCATCCCATCCCCCACCATTGTTGTATACCCACCCATTCATTGGACAGC
ACCAGTGTAGGTTATATCTCTGAATTATTCAGATGCAGTACCCCTTCTATTGTACAATGT
GGAATGTGAATTGTTCTGCTGCTTTTTATCTTCTGATAATATCTATGAAAGCAATGTGAA
TAGTTCTGCTACTCTTATGACTTCCCTATGAATTTTCAGCTGTAAAAAAGATCCTCCTGG
ATTATTCAGATACTCTGTTTCCTACTGTATAAGAATTTGCAGAGGCTCAGGCACAAACGC
AGAGGGTGGACGTAAACGATGGGAGAAGGCGTATTCCACATGTGCGTTAAGCCCACTGGG
AAGCGTATGGACATTGGATAAGGCAAGCTAGACGCTGCCGCGCGTTCCAACTCCCACCTC
CGTCCCCGGCGGGAAGCGGAGACCTCCCGCTGCCACTACCATTCCGGCGGCCATGGCCAC
CACCGCTGCCGCCGCCGCCGCCGCCGTCTCAAACCTCTCCCTCCGCCTCCCTTCGACACT
CCCCTCTAGGTTTTCCCTCCCCACCCGCCTCATACGCACTCCACACGCTCCGCGGCGACG
CCTCAGGACGGCCGCCTCGCGAACCCTAGCACCGCCCGCCGCGTCGGAATTGCCCGAGGC
GGAGGAGCTGCGGCTGGAGGCGGCGGCCGCGCTGGGGTCGGGCGGGCGGG