Contig Data
morexGenes
Links



Map Locations of contig_66016 (4923 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_66016

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_74517 3 3393 bp AK373178 Available Available None





CDS Structure of MLOC_74517






Contig Sequence (4923 bp)

>contig_66016 4923 assembly3_WGSMorex_rbca.fasta
GTGTCAATTTCTGACGCTGTTGTCTGTGGGATAACAAGGAGCAGGCTTGATGAGCCTACC
CCGGGGTTATCCCCCGACAAGTGGGTTCCCACCGCTGCCGGCCAGGCTCCCGCTGTCGTC
GGACAGGTCCGCGCCGCTGCCAGACCTTATCTTTGTCCGCACCCGGCAAGGGTGCCACTT
TGAGATTTTTTTTCCTTCAGATCATGAACTTTTCGTAATGAACAAAACTTTAAATCCATT
GTAATACTTAACACTTTTTATGACATTCGTAAATCACTTTCGTTACTGTTAGAAACAATA
AAGTATTAACAGTTTATCAAATAACTTCTGTCTAAAGATACTACAGACATTTCAATACAC
AACACTTTTCAGAATCTCAAACTATAATTCGGAAAGAACTCGACGATAGATTTTGGAAGA
AGAGAGAATTTTCGAGATTCTTGGTTATGTAGAATCCTGGGTGAAAAGAACGTGCCCTAG
GACTTACTTATGATGCATTTTACTCTTGATGAATAAATGTGCCAAAAGAAAGAAAAAGGC
CGTGTTCAAAAAAAGAAGGCCGAAGTTCCGCTAATACCGTCAGATGTAGATCTGACGGCC
CACTTCTCCCACGTCACCGTCCACCCTTTCCTGCGGCAACGCGCCGATCAAACTACCGGA
CACAAACCCGTAAAAACACAAGCCGATCTCGGCTCGCCCATCGCGCCGATCTCGGCTTCC
CGTCTCTCTCCACTCGCCTCAATCCCCAATGGCCGTCGACACCACCACCGCCGCGCCTTC
CCACCCTGAAGGCGGCGATGGCGGTGGAGAGGCAGTGCGGCCGCTCCTCTCCGGCGCGCC
CGCTGAGGAGGAGGAGGAGGAACTGGATATCAGGTACGCGCCCTATGCGCGCCGGGATGC
GTACGGGCCGATGGGCCGTGGGCCGCTTTCTTCGGCGCAGGTGGCACGGTTAGTGCTCGC
CGGCGTCGTCCTCCTCCCGCTCCGTCTCATCGCAGGGATGCTCCTGGTCGTCGCCTACTA
CCTCGTGTGCCGTGTGTGCACGCTGTTCGCGGGCGGAGTGGGAGAGGGACGTCCCCGCCT
ACAGGGATTGAAGAGGGAGGCCGTGCTGCGTGCTGGCCGCGTGTTGTCGCGGGCGATGCT
CTTCGTGTTCGGGTTCTACTGGATCCCCGTGTCCGATCGAAGCTTCCCCAATGCCGAGGT
CAGTATGCGACCTTCCTCTGTCACCTTGTAATTTATATTTAGCCGATGTGTCCTGGTTGT
TTCCCTACGTACAGTACTTGCTAGTGGGGTCCCACATTACATGAATATGTCGTGATCGGC
GACCATGGCACTGGTTTGAAAGAGTGTGTGTTCTGATACCGAGGTGTGCGTGACAGCGTA
GGACTAGAGCTGTTCTGGGTGCTGTAAGTTGTGGTAACTATGGTGAATCGCATAATGTGT
GTGGCTATTTGCTAGATGAGTATTCGCTGCTGATCTGGGAATGTTTGCAATGCAGCATCT
CTCATATGGGCGTGAGAACTGTGCTATATCAATTGGTTGCCGGTTTTGGTCTCTTTGTAT
GTAAGTGCAAGCAAAATTTGGAACATGCAGTATGCGGTGATAAGCATTAAAATATGCTGC
AACTGCAAATGGACGAATGAGTGTTCCTCCATTAAACATAGTGCTTGAACAATTGTGGTT
AAACTCCTCTATATGGCTTAAAGATGCCTGTTATAACCTCATACGCAAAGTACAGTTTTA
TTATGTTGCTAAGAAAAAGAATGCTCCTGGGCAGATCCATTGGATCAACTCTTCATCGGA
CTGGAAGTTGAATTGCTGTCATATTCCCTACATGTTAAGATCTATTTAAGTATTCTAATA
AAGCTTTATCATAACTTGAAATTAGCAGACATGTTTTTAGTGTGAAACCTAAACTAAATG
GTTGCAACATGTCTTGGATTCTTCATGAATGCAGAATGCGGAAGCTTAAGTTGGTCATGA
GTGCCTCTTTTCTTTAGAAACGTCTTGGGTAGTATTTTAGTTTTGTTGGAAAAAATTGTA
GGTACCAAAATGCCAATTGTTTCCTGCAATCTTCTTCATTTACTGTCTTTTTTGCTGAAA
AGGAGGATGACCCCCAGCCTCTGCATCTGGAAGATGTATGCAGCCATTTAATTTAGTACA
CCAGGAAGTTTGAAGCCAGCATCTTAGCAACATCTGTCGCTACTCATATTCACTTGATGA
AAGGCTGCCGATAGTCCGAGCCTAATACCAACCAGACATCGCACAAATACCTAACATCTA
AAGCCGGATGCCCCGACCAAGCCAAATACCGGGTTTGGGACGCAAACCGGTCCGACGCAC
TCATAGGTCGTCACGGCCATCTTCTACTGATCCATCTTTAGAGCAGGTACTGACGCATCA
ACCTTGCCAGGCTTGTCGTTGACACCCCCACGGCGCCAGGCAACACCTCCTCCCCACGCG
CGTTCATCATCACACATCCGTTGCCGAGTCCCTGCCGCGCCTTGCCGTCGAGACTCTACG
TTGTCGATGCATCACATGGAATGCTGCTCCACCGCTGGAAACGTCCATGGGTCCCTCAAG
CGCACACCTCCAAGAATGACGCCCCCAAGGAGGGAATGGCACAAGTGCGCCGCCGTCATT
CGATCGATCGATCTTGGGTTTCCCCCGGAGGTAGCGGAAGGAGTTGGGAGCTTCACCTCG
ATGATGCCTTCAAGAAGGAAATAACGCCGAGGGCGTCACCATCACCAGCTTCGTCACCAC
CGGTCAGAGACCAGGTTTCCACGCGGATCTGTCCCATGAGCATCCAACCGACAACATGTG
CACCGTCCAGACCGCCTTCAAAGCTCCATATCTGGCCAACCAGATCCGGCGACCATCCAC
AACCGCATTGCCACCATGGGAGCCTTGGCACACCGGCCACTGCCTGCGTGTGCCACCACT
GGAGCTTGGGAGGAGGGCCGCCAACCCACCTCGCCAAACCGCGAGAGCCGCCGAGAGGAA
TTCCACGCGCTTGTCACCATCGTTGATCCGGTCTAATCCGGAGCCAAAGTCACTAGATCG
CCGATGCAGATCCGCCTTGGACACGGACATCGCCGTGCCATGCCGTCGTGAGAGGCGTTT
CACTTGCCACCACCATCGAGGGCCACCGCCCTGGGTCGCCTCCGCCAAGAAATCCTCCAC
GTCGCCGCATCATCCACGCAGGCACCCCACGCCAGCGAGCCGCGGCGTTGCAGTGCCTTG
TGTCGCGCCCAGGCCTAAGGAGGCCGGCCCGCGCCGCCCCATCGTGAGAGAGGAAGAAGA
CGCCCCTCTGCCGCCCGCACCGGTTGGGCTTCGCCTGTCCGCGCCCTTGGGCGCCGGCTA
GGGAGGGGGAGGCAGGAGGAGGCGACTGGCGGTGGAGATATAAGGTTCCCCCCGTCGCCT
CGGCGGGGCGGCGTGGGAGGGTTAGGTCGGGGCCTAAAATTCGCGAGCAAGAAGGCGATT
TTCATGTACTGTCTTGTACAAGCATTGTATATCACCTCTCTTGCGTTTTGTGACCCATGA
CTAGGGGCAGGGGCAAGCCGCCCTGGGTCTCCTGATGCTAATAAGGGTACCGCCCCCTCC
CTCTACTAAAATTTGTTTGGTCTTAAACGTTCACTTGAGGAGTAGCCGGGTTCTCCTTAC
GTAGATTGAGACACCCTCAAATTAATCTAATCCATAAGGGATAGAAACTCTACCTTTGGA
AATTGTAAAAGAAACCTAACTTGGGGGGCAAGGCAGGCAGTACAAGCCTAGCTGTGCTGC
CGACTGGCCTGGTGCTACATAGCGGTGGTCCCACAGCTTATACTGCTGCCCCCACATGAC
ATGTGTGCATGTGACTGAACTATAACTTTGCTTCCTGGTTCCCGTGTCATGTTAGTATAA
TATTTTGTTCAGGATGTACCTAAAGATCACTCTGAAGAACTGGAAAGACCAGGGGCGATT
GTATCTAATCATGTGTCATATGTGGACATTCTTTATCATATGTCAGCTTCTTCTCCGAGT
TTTGTTGCTAAGGTACCAAAGAAAATGTCATTTTTGTTGATACAGTGACTTCGCTGCAAA
ATTATTTGTGCACAATTACTTTTAATTTTACCTGCATCTTTTTAATCCAAATGCCTTGTT
GCTTTATTATTCTTTGTAGAACTCAGTGTCGAAGTTGCCGTTGATTGGTCTCATAAGGTA
ACTTTTTTCTTCTTATTAGTGTTTGTAGAGAGTGCTTTATTAAGACAATATGTGAAAAGA
TAGCCTTATTTGTTTTTTTCATTTCACTTTAAAAGTTTCTATGAGCTTAATATTTTCTAT
TTATGTCAATCTTGCATAATAATATATTGAGAGTATTTTTCTCTTGATTGCAGCAAATGT
CTTGGGTGTATTTTTGTTCAACGAGAATCCAGATGTTCAGATTCTAAAGGTGTCTCAGGT
ATCCATTGACATGCATTCATTGATGTCATTTTAGTTATCTTACTCGTTATTCTCAGTTTT
CTAAAAATATGTCCATTACCGAAATGCTTATTTTTGGTACTGCTTCAAATATGGCGTGGA
TTTTTATTGCAACAACGACTAAGGCCCTGTTTGGAACCACAATAGATTATGATAGTCTGG
ATTATGGAGATAAATTATATAATCTGGTTTATAAAAATAATCTAAGTGGGCATGTTTGGA
GGCCAGATTATATAAACTNNNNNNNNNNNNTTACATTGCATAATGACCTGTCTACCCTTT
GTTTATTTTTTTGAAGAGGAGGGTGGGGTGGTAGGAATGTAATTATCTCCAACTTTACAA
GGGTAATAGGTCATTAGCAATCCATAATCTGATTTTAGCTGGGGTGGAGTAGATTATGAG
TTTTTAATAATCTATCTATCTAGTTTTTATAATCTACACCATAAACTGTCCTGTTTGGAG
ACA