Contig Data
morexGenes
Links



Map Locations of contig_65994 (4728 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location No map location




Predicted Genes from contig_65994

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_74502 1 2382 bp MLOC_74502.1 Available Available LOC_Os03g39160.1, FRAME:-2, EVALUE:5e-101, 13103.m04248 protein frigida, putative, expressed





CDS Structure of MLOC_74502






Contig Sequence (4728 bp)

>contig_65994 4728 assembly3_WGSMorex_rbca.fasta
TGTTTTTCGAGCTGGGACGAAAGCCCTTATTTCTACTAGTGGAGAAATTCCGCATATTTC
AGAAATTATTTCGGACTTTGACATTTAAAAATTTAATGAATTCTGACATAATTGAAATTT
GTTTTGAAATCTATTTGAAAATTCTTTGAAATTTCGGAGTTAAAAGATATTTCAGATCCC
ACTGAAATATGCAAAATTTCAAAAAATTCATTCACATGTTCCTATCAACGTTTCAGTTTA
TCATCTTTTCTTTTTGCGCATAGTTTCAGTTTATCATCTAATGAGGTGTTCTGATCACTA
CAAGTGTAAATGGGTGCCCTTTAGTTCAATTAAATGAACTAACTGTTCAAAAATTCAAAT
ATAACTGCTGAGTTTCCTTTTCCTTAGGCTTCTGAAATTTTAGTTCACTTGGTTGGAGAG
TACCATGGAGGGTGAGAGGGTATCCCAAGGATCATAAAAAATTACATCCCTACAAGGTTT
TCTCTAACACAGTACAGACTCAGACGCTCACGCGCATACTAATCACAAGGTTAAGAAGGA
AGTTTATGTTAATCCTAAAGTTTTAGGCTAAGACCGCCCAGTGACAAAGGCCAATCCACA
CGAACCGGAGTTGCAGGACTTGTTCCTCAGTTCTACTCAATACAGTACTACTAACACGGA
CCAGAGCATGGAGAAGGCCCTCCTTGATCCTCTGGGAAGTGCTGGCCGCGACGATCACCT
ATCCCGCCCGCGTCGCACGCGAATGAGCCGCCGGCGCCGCCGCCAGGGGACAGCTCGGCG
AACCGACTCCGCCACCTCTCCGCGCGCGTAATGCATTTCCTGTTCCGGTGGTAGTCGTGC
TCTCGCGTCCGCTTCCTGCTCTGCTTCTCCCCCGGCCTCTGCCCGCCATGCCGCTCCTTC
TGCTGCCGCCGCCATTCCGGCGTCGGCGGCGGCTGCTGCTGCTGTGGGCTCCAAGCAGGC
GAGGAGGAAGAAGAAGAGGCGCCCGGCAGGCTCAGCCGCTTGTGCGCGTACCCATGCAGC
AGCTGGGTGATCTCCGCCTTGACGCCGGTGCGGTCCGCCATGTCGACGTGCTCGTCGACC
GCCTTCCACGACAGTATCAGAGCGTTCACCTGCTCCGTCATGGCCTCGTTCTGTCCAAGG
CAAAACTCCAATGGATTACATCAGCTGGAACGAAATGATGTGTCATGCGTTTGCACTTTG
CAGCACATCGGTCAGTATAAAGAAAGCAATAGTAGTAATAATAATAATCCTGTGAAATAG
CTGGACACCTCTTCCATGGAGTGAACAGGACTATTTTCTTCTAAATCGCGACGAGGGTAA
TCCGTCATTGTGATTTGACATACCCATTACTCGACGACATACTAATTGTTCCAGGTTTGT
GCCATTTAGTTCCTGATGATGAAAAGAGCTAAAGGCTGCTTGCTTGTTCACCTTGGTATC
AATGATGTCATTTGAGTATAGATTTTGATTCAAAACTCAAGAGTTTTGAAGGAGAGGAAC
TACTACGAGTGTTACAACAGACGATCGCATCGCTCTAACCTACTCGCATTCATATGAGCT
TGACTAGTATAAAGATACTACTATTAACAGGATATCTCATGTTCAATTTTTGCAAAACAT
TCTAATGCGACATAATAAGATATTCTTATTGAAGAAGGTATAGGACGAACCAGAGACTCC
GGTGAATCGCCTTCCCTGCTTAATATCTCCAGAGCTGTCTTCTTAGCCTTCTCAACATAC
TCATTCATGAGGGTAAGTGGAGGATATCTGTCGGTCAGATTCAAATCACACGCCAGTTTG
ATAGCATCAAGTTGCTGCCCATTCTCAATCAGATAGTTGATAGCAGCACGTTGCTGCCCA
CTCTCAACCAGATAGTTCACCGAGTCTGCACAAGAACAGAGTCCACAGCTCAACACAACA
CACGAACTGGCAAAGCTAGTGCGACAGAGAGCTAACGCTCTAATTACAGAGTCTATTTAA
ATCAGCGGTTTAAGAGTATCAAGAGTTCAAAACATGCTCTGCTACAAGTAATAATGTTTT
CTACGGCTGTGTGCATCACGCGATGCAGAGGCCGGGGTTACCCCTTTTGGAAAAAAGTAA
TAAGTGGCGTTTTCTAGATACAGGTATTAACTGCAAAAGATACTCCGTTTACAATTACTA
AGTGCAAATGAGATATTGGCATAAGGTCAGCCAGTAAAAGACCATATCATTTGCCCACTG
CTAAATTTTGCATGCATGCATCATGCATGATGACAACATAACATATACTCGTAGCAGCTT
GAAATTAGCAAAGTAGCAGCTTGTCCACTTGACATAAATTATTCATCAACAGGTGATGAT
ATTGAATAATAATATGATGACTTGGAACTAATAGCAAACAAATGTATGTGCATGACTGTC
AGTTTCGCCATTGCATCAACCAAATAACAAAAAACATTATTATACAAGGGAATGGTTGGG
AAATATGTAATGGACTTGTTTGCAATGCAGGATTTTTTTTTTCAATTCTTGTGGGATTTG
AACTACTTCCTGTCGAATTATTGTGTTTCAGAAAGGGCCAAACATGCATGCGGTAAGATT
TTAACTTGTACAGCTACAGGTTTGCAACATCTAAACACCAGTATAATTAGCACACAAATG
CTAGCGATCAGATTCTTTCACATGCTAGCAATTGAGAAGAACATGGTAGAGGTCCAGAGA
GAGTACATGGAACACTAAAGTGCAACATTATAAGACCATGACTCGTGAACTGCAAGCATG
TTGAGCTGCTCTCTATTCATATCCAAAGAGCAAGCAACATCGACCACCCCTTCAGGGGCA
TACCACTGAAAGTATCTCAGTAGGCCACATGAAAATGATACTTATCAAGTTGTTTTGGAG
ACTGTGTCACTGCAAAAAACAAAATTTCTACGCAGAGAGGATCGTCGTCAAACAGAAGTC
CACAACAAAACTCATCTACTTCACAGCAGTTAAATGCTTAGCTAAATGTGTCCTTAGGCA
ACTTCCACAGGGGTATGCAAAACAAGCTGAACATCGACAATGTGAAGCGATGACCGACGA
CACCGATGAACGAGTAACAATCCATGTAGGCGAACACGAAAAGCATGCTAAGTGGATTGT
AGAACACACTCACAATCTGCATTTGACCACAGCATTTCATAGAACTATGATTCAGCAGCG
AGAGGCATCACAGCATACCAGCGACGGTTTGAACCATCCCAAGGCTGTTGCAGAGCTCGA
CGCAGCTCTGCTTCTTGTTGCGCGGGACGTCGGCAAGGAGGTGCATTGTCCCACGAGCGT
CCAGCTCCAAGGTGATCTTGTACGAGACGAGGAACTGCAGAAGGCCCCATACGGCGAGCC
GGCCGAGGTCCCTGCGCCCTTCAGGCTTTCCGACGATCATCTCCCTCCAGTCCGCCGCCA
GCCGGCCGGCCCGGTCCAGCGTGGCCGCCGACGGCTCGGCCGCGAGGTTGGGGACCAGAC
AGAGCAGCGCGGCGCAGTTCTCCCAGTTCTTGTCGCTCTTGGGCTCGGTTCTGTCCAGGA
AGTCCCTGACGGCGCCGACGACGAGCGCGTGCGGCTCGGCGACGCACCGCAGCGCCGGGA
GGAATTGGCTCCGGGCGCGCAGGCTCCTCTTGTTGCCCCAGTAGAGCATGTCCGCCAGCA
CCGACGCATCCCTGACCGCGCGCGCCGCCGCGAGATCCCACCTCCTGGCCTCCCCCGCGC
CGCCTGCCGGTTCCGGCGTCGTCTCCCCATGGCGATGGCCTGGGTACGCCCCTGTGGTGG
TCTCCTCGGCATCCTCCTCGTCCTCCTCCTCCTCCTCCTCTGGTTCAAGGCCAGGAGACA
CCTCGCCCTCCTCGACGGCGTCGTCTTGGTCGGGAGACCACTCGGGTGCCATATCCGCCC
TCCCCTGCTCCCCCTCCTCGACGGCGTCGTCTTGGTCGGGAGACCACTCGGGTGCCGTCT
CCGCCCTCCCCTGCTCCCCCTCCTCCCCGGCATTGAGGTCCGAAGGCGGCCGATTGTCCC
GCGCCCCATCCTCCTCCTCCTCTGGTTCAAGGCCAGGGGACGCCTCCCCCTCCTCAACGG
CGCCGTACAGGCCGCGAGACGACTCGACTGGCATCTCCGCACTCGCCTGCCCCCCCACCT
CCCCGGCATTACGGTCCAAAGGCGCGCGCTTGGCCCGCCCCCCATCCTCCTCCTCCTCGC
TGCTGTCCTGGCCCTTGCCCCTGACGTGGCGCCGGACGGTGTCGGCGGTGGCCGGGAGCG
CGGCGGCCTGGCGCGACTGGAGCAGGCGGAAGCGGGCGGCGATGGAGGACTGGAGGGAGG
AGATGTGGGCGTCTACGTCGGCCCAGGTGAAGGGGATGGGGACGGGGGAGGCGGCGGCGA
GGCGGTCGAACGAGTCCCGGAGGCGCTGCTTCTTGGCGGGGAGGGCGGCGATGGCGGCCT
CCAGCTCCGACGCCATCGGAAGCGCGGCCGGAAAGGAATGGGGATTCCGGGAAGGGGCTG
GGGTTTTCTTGCCTGCCGGAGGGCGGAGGCGTTGGTTGGGGTTTAGAGAGAGAGAGAGAG
GGACGGTGCGTGTCAGTCAGCCATTCTTCGCCCCCGTTTCCATCAAAGCACTGCTTTGTC
TTTTACTGCTTGGCTTCGGGGAGTTCGGGGGGGGGGGGGGGGGAAAAGCCGACCCGGCTC
CCGTTGGGCCCACATGTACTGACCACAAGGCCCCTGCGGTTTGGGTCC