Contig Data
morexGenes
Links



Map Locations of contig_65965 (5984 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_65965

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_74482 3 2040 bp MLOC_74482.3 Available Available LOC_Os09g30350.1, FRAME:+2, EVALUE:9e-159, 13109.m03031 protein expressed protein
MLOC_74483 1 707 bp AK362139 Available Available None





CDS Structure of MLOC_74482






CDS Structure of MLOC_74483






Contig Sequence (5984 bp)

>contig_65965 5984 assembly3_WGSMorex_rbca.fasta
AATCAATACATCATCAGTTCCACCAATCCCTTTATATCCTTTCTACATTGAAATATGTTA
TTCGATTAGAGAAGTGCCGTATCTTTTTTCTCCCGTTGCACGTGCTCTTCTGCCAGTTGA
TATTTTTTTACAGTTTTGCTAAGTCTCAGTCGACTGAAGACTTCGTTATGTCTCGGTCCG
TGCTATATGCCTTTGATTTTGCATGGTGATCCGCACATTTTTTTCTTGATTTTTCCTTTT
TATTCTTATATACTATATCACTTGACTGACTTGATTAAATCTCAGTTGAGTGAGACCTAG
CGAGATTCAAAAATTTATTTAAAAGGTAAAAAATAATGATGTAGAAGACAATGAGGACAT
GACATACACAAAGGCATTGGTCGCACTAGCCGTCTAGCCGTCGCCGTCGCCGGCCGCCTA
GCTCGCTCCTCCTCCTGCGGCCACTGGATCGTCCCGATCCGATCCGACGGCGTTGGAAAG
GTAGCAAATTGATCTTGGTAGATTGCGTAATCAAGTACAGAAGACAGGCATCATAGAAGC
TGCCGCCAGAACGACCATAACGATAAGGAAAACTCCATTCCCGTCCCCTGCGTTTTCTTT
ACTCCCCTCTCCCCTGCTTCCTCCCCACTTCCACTCCTCCTCCTCCTCCTCCTCGGTTGG
ATCTCCGAGATCGAATCCGAGGAATTCCCGATCCTCATAGCCCCGCCATGCGCTCCCGAC
AACCCCAGCCTCGCGCCCCCCTCCCAGCTCCCTGATCCCATCCGGCTTGTCCCCCAGGGC
CGCTGCCGCCGTTGACGCCAATTGGCGCCGGACGGCATGGACTCCGGCGCCAACAGCGTC
GGTTCCGTCGGCGAGTCTCCGCCGCCGGTATCCCCTCCTGGTCGCCCGGTCGCCAAGGGC
CGCGGCCTCCGCCGGTGGCGCCGTATCCCCCGCGAGCACCACGACGACGAGGGCGGCTCC
CCCGCGGGCCCCGTCGCCGCCGCAGCCCCCGCCGACGCTGGCGCTGAGGTGGACCTGGCG
CAGCTCCATAAGCGCCGTCTCCCCGTCGGCGCCGACGCGCCCAAGGGGAAGCAGGAGGTG
GCGGCCGAGGAGGATAGCCCGGTCGCGTCCGTCGAGTCCAGCTTCGTGCCGCCGGAGGCG
CCTCCGTCGCCGTCCCCGGCTACGACTCCGGCTCCGGCTCCGACTAGTCTGGACCCGGAT
CTTGGCCTCCTGATCGCGTCCGCCGGCTTCTCGGTGGGCGCCGGCGGCGCCGACTCGGAC
AACAGCGACGACCGGACCAGCAAGTCCTCCACCGCGCTCCCGCGTCACGACTTCTCGCTT
GCAGGCTTCGGCCGCGAGCGCGACAGGGGGCGGTCCCGAGCCCCTGGCGCCGCTGCTCAC
GCCAAGAACCTACGCACCGCACGCGCCCGTGGCGCCGGTGCGCGCGCCGTCTCTGTGGCC
TCCTCCACGGTGGAACCGGAGAACTCGCGCTCCAGTGTCGAGTCTGACCTCCGCAGCACT
GGCGCTGCTCACGCGCGTAAATCAAGCGCTGGCATCAGCAGTAATGGCGTTCACAAGTTT
CTCTACACCGATGGCGACCACAGCGAGGATGAAGCTCCAAGTGAGCACTTGGGGTCTGCA
GCAGGATCTTTCTATAAGGAGAATGGGAGTGCAGTAGGGAGAATGGCAATGGGGAATGGT
GATTTGTATGCCCATGGTCATGGATTTCATGAAGGGAGCATCAGCAAGGGTGAGAATGGA
GGGATCCATTCAGGTCTTGATCCGTACACCGATTCAATGTCGTTGCTTCAGTCAGCACAA
GAAGCACTGGAGAATGGTATGATCATATTCCTCTTTAGTTTATTCTCGCAAAATATCCCT
TTCACTTTAGCTTGATGCCCAAACGAGTTTGTTCCATTAGGTTGAGCAAGTTTTTGTTAC
TACTATTTGACATGCAAATCTGCATTTCACATAGTCTACTTACTATCTTAGACCTTAGAG
GGTGTAGTTCAGAATTTCAACTACTGCTGAGTATTTTTTTTTCAGCTACCATTTTGAGAT
TAAACTGTTTGGTTTCCGAAAACAGGCTACTTTATTAGCTGGAAACATCTGAACACTTGA
TGCATTATAGTGATCAACAATAAATGGGAGAGCACATGCATCCATTATGTCTGTACATGA
TCCTAGATACTAATTTTTGTCAACTTTAATCCACTTTGACCTCATGCTGCGTTCATACCA
AGTGTTGTGGATTCAGTAACATGTCAATTCTGAAGAAAACGTATCATCTTCAATAACCAT
TATTAGAGCAGAAGTGCTCATTCTCCTAACCTGTTGCTGCTGCTTCGCTCTCATGTTGGA
TCTGCAAGGTGTGGTTACATCAGTCTCTTTCTCTTCTTGGTACTCCACCACCCCACCCAT
ATGCTTGGCCCCTCTGATGCAGTGACTTCTTGTCCAATGTGCACACGCATGCCAGTTAGA
TGTGAGGTTTCTAGTTGTGCACAAGTCATCTTTTGGCCATTCCGAAAAAAGAAACCAGCT
TTGCATTTCCTGCCTATTGATTGCACAGAAAACCACAGTTGAATTTAATTTGTTAAGCCT
TGTCAAGTGGGGAATCTAAATGCTGATTTATTTTCGTTTCTCTCATGGAAGCGTGGCGAT
AGTGAGTCATATCATTAACAGATTTGAGATGGAAGAGAGGTTGATGATTTAGTAACCCAT
TTTCATCAACATGTCCAGCTTGTAGTAAGAATTGACATGGAAGAGAAGAAGAGAAGTTGA
TCTCTGATAGGCCTGGTGAAGAAGAAATTACTTGTAGTAACGGAGATGATGAACTTCCAG
CTAAATTTGGAGCAGACATTATTGCGAGCTAGAAGTTAGGACAAATCGATGCTACTTAGC
GATGTGAACGTGTCAGTTGTGGCGTGAATACACAGGAATGGTTTCGGAAGAGGGAATGGA
GGCTATGGTTGTTATAATAATATAATGGCCACAGGGGAGGGCACGTCTCCACTTTTCAAT
GAGCTTGCTCCCATGGAAAAAGCAAACCTGGTGTAGAACTTGGCTCACATTATGTTAGGA
CATCCTGCCAAAAGAGTGCGTTCACGATGATAACAATGCTTGTTTAAAATGGAATACAAT
ATGCATGTTCTTTTTTGCTGTTTAACACATCAAACTATCAACAGTTAAGTGGTGACTTGG
TGAGTTGATCAATGCGTTAGCTCAATGCTCTGGCAATTAATTACCGCCGTTGTGGACTTT
CCCATTTCGTGAGAAAAGATCCCTTGTATTTTACATCATTATGTTCTCTGTGGCATTTTT
TTAATGTATATTTCATATCAGATCAAGTGGTCTGCTTCATCTCCTAGTTTTAAGAAAGAA
AATTTGTACACTGCAGTCCGCAAGCTTATTTCCTAGTAGTTTCAGTAGCAGCCATTATAG
CATAAAAAAAATGTGTAAACGCATCTGCTTACCCTGCATGTTCTCGGAAGTTTCCTTAGT
CCATTTTCTGTTGAAAATTCGTGAGTGCTCTGTTGCCGTATCATTGCAGTTGGACGAAAA
TGTTATGTTGAAAACATGAAATCTTTATTTGCTTCAATCAAAGTGTTGTTTTGCAATAAC
TGTTTGCTTCTGCATATTTCTGCAGAGCTCCAAATGTTTGTGGAAATTGGGAAAGAAAGC
AGTGACAATTCCACGGACATTTACAATGAAAATGAATGGATCAGTTCACCCAATTGCGAA
TATTTTTCAGAAGAAATAAGTGAAAAGTTGAAGCTTCTAGAGTCCAAACTGGAAGAAGCT
TCCCTTCTTATCGATGAGAAGGATTCAAGAATACTTGAACTTGATACACTCAACCAGACA
CAACCAAGAGAAGCAGCTCTATACAATAGCAAGCTGCTGTCCCTACAGTCTGAAGTTGAT
CAACTGCTCATGGAGAAGATGGAGGCCGAGATCCAGTGCTTCATCCTGAAAAGAGCTTCA
GAAGCTTGGCAACCCCAGACCGAGGGTCAGGGCACTCTTCATGAAGCACAGAAGTCTCTG
TCGGAGGACCATAAACAGCTGGAGGTCAAGCTTCGGCACACCGAGAATAGAGCAAGGACG
CTAGAGGAGATGGTTGAGAAGCTAGAGTCACAGTGCAAAGAGCTGTCGAACGCTTCAGAG
GTCCTGAAGCTGCAGGCCGGAGCAAGTCGAGCTTCGCTTTTTTGTTCCGTTCAGTTAGTG
CTGCTGTGCGTCGCCGTGTGGACATTCGTGGCGCGGTTCTTGCCCACTCCTCCCGAATTT
GTACCTACTTGATGAGGTTAGAAAGTTTCTCTGCGGATGAGCCTCTGTGTAGACATTATT
GAAAAGTTACTTCATGTAATCTATTAGGCATTTGGTGGCCTTATAAATTTTCTGTTTGTA
ACATCAACTCAGATTTTGTTAGTTACCATCACTTTACTGTACTTATTCACAAATCTTCTT
GCTGTTTCTCTCTTCTCTGTATCCTGGAAATGTTAATGAAAATTACAATATCCCAGTGTA
AGAGTGTCCATGCTGCCATCATCTTCTATGCTCCTGTTTGGGTGTTCTGTGAAAGTCATG
AAGATTGTTCCAAATATCGGCCAAGTATTTGGCATCTCAGTCAATTGCCTCAGCACCCAA
CCAATATGGTATCAGTTACAGATATCCTGAACATTGCATGAAGTAGTAAGTAGTACTTCC
TTCGTTCATAAATATAAGTCTTTCTAAAGATTTTACTACACTCTAAAATATATTTATATA
CATCCATATGTATTTCGTAGTGAAATCTCTAGAAAAATATACATTTAGGGATGGAGGAAG
TACATTTTTTTCTAGGGCACACATACCGAACATAAATATTTCATGACAAAATATAATACA
TTTTCCCCTCCACACTTTGGTACGTAATCAAATTGACAATAAAAAGGATGGTAAACTAGC
GGGATTGCGAACAGAATATGTGTGCCCTTGTTGTGACCCATGTCAATTGCCTGTAAAAGG
AGGGGATTTTTTTTAAGAGTATAACTATAGATGTTGAGATTGGTTTATCTAACGTGCATG
GATCCACTGTCCGTGGTTGCTTTTAAGATTTATGTAACTTTTTTGGTGTTGTCACAATTT
ATCTCATTCCAATATATTTTCTTTGATTTTTTTTTCTTGTTCCGCTGTCTGTGCACTTTG
CAACAAGATAAATTTTGTAAACAGGTTGAGTCAAAAAAGCAACACGGATCTCAAAGCAAT
CATGGACGGTCGATCTATGCACAGAATATCCCGTGTACAGTAAAATTGCTTTTTCTACTA
TTGGTGTAAGAGATTAGGGATGTAAACGGCGCGATAAACACCACCGAGTAGGGATGTAAA
CGGCGTGATAAACGGCACCGCAAAACTTTTCTACTATGGGTGTAAGAGATTAGGGATGTA
AATGGAACGCCGTTTACGTACCTAAAAGAGAGAGATAAAATCATTCATGTGGCACTGAAT
AAACACGCGGTTGCACTACTTGTCCAGATCAATCTTTCACCATCTCACATACATACATAC
TCATGATGGTACGTCATCAGCGTATACAGAACTAATGAAAACACGGCGGATTACAACAGC
AAAGCCGCTCCGGCCGGCACGCAGGCAGGCAGGGGAGACGGACGGATCAGCCGAAGAAGG
GAGGGTCGTATCCGTTGCTGGTGGTGGCGAGGATGTAGTAGGCGACGATGTGGCCGATGG
AGCCCCATGCGAGGACGTCGACGAGGTTGAAGCCGACGGGGTCGTTGGACTTGAGGATCC
CGGCGAACTCCTTGGCGCGCTCGTCGCCGGCCTCGAAGTGGGTCTTGCCGTTCTGCTCGG
GGACCTGCTTCGCCACGTTCTCCCGCTGGAAGTTGAAGAAGACGAAGCGGCCCATCACGA
GCGACAGCCCCGTGCTGAGGCTGATCACCACCGACGGCTCCAGCGCGGCCCGCGCCGCCA
CGGACCGCCGCGCCGGCGGTGAGACCCCCCGGAACGAGGCCGCC