| Morex x Barke POPSEQ 2013 | Oregon Wolfe POPSEQ 2013 | Morex Genome Release 2012 |
|---|
| No map location | No map location |  |
Predicted Genes from contig_65881
| Gene ID | # CDS Predicted | Max CDS Length | Probes in Cluster | FPKM by Treatment | FPKM by Replicate | Top Rice Hit |
|---|
| MLOC_74449 |
1 |
275 bp |
None |
Available |
Available |
None |
| MLOC_74448 |
5 |
1836 bp |
MLOC_74448.5 |
Available |
Available |
LOC_Os11g05260.1, FRAME:+1, EVALUE:0.0, 13111.m00501 protein phosphoglycerate mutase, putative, expressed |
| MLOC_74447 |
3 |
2001 bp |
MLOC_74447.1 |
Available |
Available |
LOC_Os12g05230.1, FRAME:+1, EVALUE:0.0, 13112.m00526 protein ATP-dependent RNA helicase, putative, expressed |
CDS Structure of MLOC_74449
CDS Structure of MLOC_74448
CDS Structure of MLOC_74447
Contig Sequence (9170 bp)
>contig_65881 9170 assembly3_WGSMorex_rbca.fasta
CAAAAACATGTAAAAAACAAGAACTGACACTTGACACTGAGTTAATAAGTTAGTATCAAA
AAATATATAAAAGGCATGCAAAACATCCAAAGTTTGACAAAAATAATAGCATGAAATCAT
AAAAAAATATAGATACATTGAAGATGTATCAGACCGCTTGTGCAAAAGACCGACATTTTG
ATGCAGTAAGCATCATATAGGATTTTCCAACTAGTTGCTCCCTTCTCACCAGGAGCTACT
ATGCAGCGCTACACGAGCCCGTTAACATCCAGCGCGTGCAGTGGTGTTAGCATGGGCCCG
CCCACTAAAGTGTTATCCAGTTTTATTTTTGATTTTTTTGTTACAAAAATAATTGAAAAA
GGTTTACAGATTTAAAAAGAAGGTTCATTGTTTTTTTCATATATTAGAAAATGTCCATCA
ATTTGAAAAGAAAATCACTGAAAATGAAAAAAAGTTCATTCAATTTAGGAAAAGTTCATT
AAATTTAAAAAATGTACAATAAATTTCAAAAAAATTCATAATAATTCAAAAAATGTTTAT
GTATTTTTGAAAAAATTCATTGAACTGAAAAAATGTTCATAAATCTTAAAAAGGTTCATC
CATTTTGTATAATATGTTCACCAAATTTCAAAAAGTTCATCAACATTAATTTTTTTTCTT
CAATCTTAAAAATATTCGTTGAAATTAAATAAAATTCGTCGATATTCAAATAAGTTCATA
GAGTTAAAAAAAATGTCAGAAGTGACTAAATGGACCGGCCCTGTTCGAACGCCTCAGGTG
CCAGTTAACAAAAATGTACGTTAACTGACGACTGTGGTGCCAAATAGGAAATGCCTCTCT
CACCTGCTTCCACCTCGTTGGAAATCGGAGTTCTCGTTGGGCTAGGCCTTCTTACTCAAC
AGGCCTGAGCCTTCTCAAAATGGGCCGCACGGTGACATAGAAACGGAGCAACTCCTCATC
CGTTTTGGCCAATCTCATTCTCGCCGGCCCTGTTCGTGTGCGAGAGCAGAGGAGCCGGAG
GTTCTTTCTAGGTTTTAGCGCGGGTGCGGCGGCGCGGTCCTGCCGTTGCGTGTTAGGTTT
GCCGGAGCAAGCGAGCGGGATGCCCAAGGGCGACGATGCGCTGGCGCGGAAGCGCGGGAA
GGTGCGCCGGAAGCGGATGCGCAGCAGCGAGAACGCCGTCTCCACGCGCGTCGCCGCCAT
CATCGCCTCCAAGCGCCGCCGCAAGACCGGCAAGCGCCGCGGCTGCGAGGGCATGTGCTT
CTCCCTCCCTTGCCCCGAGGACCCCTTCAATGAGCGCCACGGCAAGAAGCGCAGGACCGA
AGACGCCGCCGACACCAACGACGACCACGAGAAGAAGAAGAGCAAGGATTCCAAGAAGCG
GCCGCTGGAGAGGGCCACCGGTTCTAATGCCATACCCGTGCGGAAGAAGGAGACGGAGGA
GGACCGGGTGGAGTATGACCGGCCGTCCAAGTTCCTGGTGGTCTGCCTCAACGCGATCCG
GGACGGGGCGGTGGCATCCGAGGAGGACGGCGGCGGCATCCACGACTCTGCCTCCTGGGG
CATGGAGCTCTGGAAGTCCTGCGCGGCGTCCCCGCCTTCGGACGTGCTCGACACCAGCCA
CCGGTACGCCACCCGGCAGCAGACGGCGTGGCTCGTCTCCACGGCCTGCGACATCGTCGC
TAGGAAGGAGAAGCTCGGAGTGGTCGTCTCATGCCCCTTCCTCCTCTACCTCGTCCCTTC
CCAGGAAAAGGCGGTGCAAGTGAGTACTAACGCCCGGCTCTCTCCACCTCCTTGTTCTTG
ATGTTGCAATGTCTAGTAGTATCACCAGGAACAAGGGTTAATTGATCTAGTGATTTATTT
GGTATTGCTTCATTTCTTGAACAGGTGCGTTCAATGTGTAAACCGCTGAAGTCTCTTGGA
ATACATTCAGTGAGCTTGCATCCCGGTGCTTCCATTGAACACCAGATTTCTGGGTATGCT
TTCTTCAATCCTTAGTCTCATATACAGTATCATGAATGTGAATATCTTGTGACTGTAGAG
ACTATGGATGCATTTATATGCGCAATCCTAATTCATTTTCTGTTGTCTCTATCAGACTAA
AGAGCTGTGAGCCCGAGTTTCTTATATCTACCCCGGAGAGGCTCCTTGAACTGGTTTCAC
TAAAGGCAATCGATATATCGAATGTATCAATGCTGGTGCGAAAATTTGATATTTTGGTGT
CTTCTTGATGATATTTCATATCATTTTTCTTGTATTTATCATCCTGATGCTTGTCAGTAT
TTCACTTTGAAAGCTATGTTCTCTGCAATTCTTGTAGCGAGTCGTATAGCCTTAACCCAG
TATGCTTGGTGGCCTCACAAGTTTTACGGTCAAGTCCTAGCATTCTCAGTTATCTAGTTA
CGCTAACATAAAAAATAACTTCTTCTAACAGGTCATTGATGGACTAAAGGGATTCATGGA
CCTTAATATCATCAAAGAACTTCGTTCTATTCGAGGTACCATATCAGGTGATGCACAGGT
AACTATATTTAGTGGTCAATGTGACCAGAGTGCGGCAACAGTGGCAAGAAATCTACTACA
TGGAAGAATTACAAAGCTTACCACAAATGATTCTGTTGCTTCTCGAAGTGCATTTGTAAC
ACAGCACGTACACTTCTGTACTAAAGAGGAGAAGACATCAAAGGTAATTGGAGCGTGCAG
GCAGAGATGTCCTGTTCATTCTTACTTCATGATCTACTTACATGCATGTCCTAAATTCAT
GGTTCACAGTTTTTTAGCTATAGTTGATTAAACTTTAGATCATTTTTGCTGATTACTCAG
GAGTCAGGACACTGACAAGGTCTTTTATTTTTTTCAGGTTAAGGAAATTCTTGAGCATGT
TTTAGAAAACCATGCTAGTAAGACAGCAAAGGTTTTGCTAGTAGCCGCGAATGATAATGT
AGCGCAGAAACTCTCTTCATCCCTCAAACTGGAAATTCTCACAGTGAATGATGGCTCGCA
AGGCAGCACCTTTACCGTATGCAGCAGGTACAGTGAACCATTACAGTATTTCTTTTTGTG
ACATTCCCTATCGCAGAAGGCACACTGAGAACATGTGAAATATAGCCAATATTCCCCCCC
ACACTTTCACTTTGAAGCCATATTGCCAAGGCTTTGTGTTTTCACTTTCAGACAATTTTG
AGCTGCACCACTTTTTTATTTAACTGTGTTGTGGCACTGTGACATTGACGACTTATGTGT
TCCTTTGTATCTACTTGCAGCATGGGGCTTATCAATGTACTTGTGAAAGGCTGTGAGAGC
TTGGCAACATCAGGTGTCGAGGAATTTGAGATTGTGTTGGTCGCGGACTTGCCTCCATCG
TTTGACGATTATGTCGAGATCCTCACCAGGACAGCTCGTCACACGGTTGCAGGGGAGGTG
CATGTCATCTTCTCTAAGACTGATGCTACTCATGCAAAGCCCTTGGCTGATGTTCTTGCA
AACAGTGGACAGGCAGTGCCTAAGTTGCTAAGACAATTAATGGACAAGAATCACTCCTGA
TAGCAATATTCATTTCTACTTATGCGGTTAATCATGATGGACGGGCAGCCAAATTAGCGG
TCCGCAACTCTTCCTGTCACCAAGCAATTTTGTCAGCGTCCAAGTGTTTTGCCTTTTTCT
TTTCCATGCAATTCTTGTGTGTCGATTATCTGTCGCCTTGATGTAGCACATTTAAATTTT
ATGAGGAATATACGACAATGCCTTTCCTGTAAGAACCGAAGTGCTATATTGTCTGAAAGG
AACTTTTGCGATGAGCTTGTTTGAAGACGAAATGTGAGTTTTGCTGTGCTCACCAAATCC
TTGTATGTTCTGACAGAATTTTACAACAAATACAAATAAAAGTTTATGATGTACGTCTTC
TGGAATGGAAGGCGTAATTTGTAAAATACGCTTCCTACGGGTTTTTCTTCGGGAACATCT
TCGCGGGAAACTCGACCCAAACCACACATCCCTCCGGGTATCGTCCAAATCAGAGGGGCG
GATAAAATCCCACCAATGCTCCTCCTCGCTCCCACCCCGCCGCTGTCGACGGCTACCGCT
CACCGGCGACCGGGTGGCAGCGCTGCCTCATGCATCCGCTGCTCGAGCGTGCGCGAGCTC
GATAGGTCCCCGAGCCGACCGCCGCTGCCGCCGCTGGCGGAGGCGAAGCAGGTGGTGCTG
GTGCGGCACGGGCAGAGCACCTGGAATGCGGACGGACGCATCCAGGGCAGCTCCGATTTC
TCCGTGCTCACCCCGAAGGGGGAGTCCCAGGCGGAGACCTCCCGCCTCATGCTCCTTGCC
GACGCCTTCGACGCGTGCTTCACCAGCCCGCTCGCCCGGTCCCGCCGCACCGCGGAGATC
ATCTGGGACAGCCGCGACAAGGACCTCATCCCGGACTCCGACCTCCGCGAGATCGACCTC
TATTCCTTCCAGGTGGGGCACCTGCTCATTCGCTCGCTTGATGTTTGTGCAAATGCTTGG
CGGCCGGCAGGTGCTTGCGGAAATGCCGCACTGACGAGCTGGATTTTTGCTTGCAGGGGC
TCTTTAAGCATGAAGGGAAGGAGAAGTACGGGGCTCTGTTCCAGCAGTGGCAGAAGAATC
CATCGGACTGCAGCATCGATGGGCACTACCCAGTGCGGGAGCTCTGGGACCGAGCGCAGG
GCTGCTGGGAGAGGATCCTGACACACGAGGGCAAGTCAGTTCTTGTGGTTGCCCACAATG
CAGTTAACCAAGCGCTGGTCGCCACATCCTTGGGTAAGGTGTAAGCAGATTTTGATTTGG
ATGTTATAATGCTTAGGGCGTGTTCACAGTTGGTGTGTTTGTGTTTAGGACTTGGCACGG
AGTACTTTCGGACTCTGCTCCAAAGCAACTGTGGCGCTAGTGTGCTGGATTTCACCCCAC
AGCCCGGCGGACGCCCTCCAAGTGTGTGCCTTAACCGCTTAAATCAGGTGAGTGTAACTT
TGTTCGCATAACGGAACTTTGCTTTCCTTTGTAACCAAAAAAGTTCTGCTGCCGCAGTGT
GCTGAAACTTGAGTTTCGTGCTTACTGGAAGCCCGAAACACACTATTAATATGAACCTTC
TACTCCTCGCCTGTTGTGTTAGCACGAGACCTTCTACTCTTATATCAACTTCGATATAAA
AGGAACTAGCATGGTAGCCTGCTTCATCTGCATGGCTAGATTTGCTACCATCTTATTACC
ATTAGCGGATACTATTTAGTTTTTTTTTTCCGAAAAGGAGGATAACCCCCCGGCCTTTGC
ATCTGAATGATGCATGCAGCCATTTTATTAATTATTCACAAAGATCATATAAAGTAATAC
ATCAGTCGGCCTGAAGCCACCATCTAGGCAACACTTGTTGCTATTCCTATCCCCTTGATG
AAGGTGTGCCGAATATCCGGGCCGAATACCAAACGGACATCACACCAAAACCTAACATCT
ATAGCTGGATGCCCCAGCCCAACCACATACCGGGACCGGGTCCCGTACCGGTCCGGCACA
CTCTCAGAGGCTGTCACCACCATCTTCCACCACCATCTTCCACCGGTATCTTCCACCGGT
CCATCTCGAGAGCAGGAACTGACGCATCGACCTTGCCTGGCCTGCCGCTAGATCCCGTTG
GTGTGCGAATGCAGGCACGCCCCTCCACCGCGAGGTACTCCAGGCCGCCGCCCACCCGCG
CCCCGCCACCGCAGGGGCACCGAGCGCCGCCGTCCTCGACGCGCCCCATGCCAGCCCTGG
TGCAAGGATGCCGCCCCGCCGCAGCACCCCCGAGCAAGGAGAAAAAGGGCCGCGCCGCCG
CCGACGCGAGCCAGGCGTGTGCGGGGGAGAAGGGGACTGGCGGGTGCGATGGGGGAGCCC
TCCCTGTTGCCTACGGGTGCGACGAGGGAGGGTCAACTTGGCCTGTAAGTGCTTTAGAAT
AATTTGCAGGATAATTAGGTGTTTCCATATAACATTGTAAATTTCGTGGGAAGTTTGAAC
TTTGAAGCAACAATACATCCTCAGTATGGAAAAATTGCATTGAGCATATTTCCTCTGCTT
CTAGATAGTTGCGCGAATGCAGGTAATGTTAATGAAATTAGTCAATTCTGCTGTGCTTAC
CACTATTATCAAATGACATAGTATTTCAACTACCAAAGCATTAATTATCTTCCATCAATG
CCACTGTTTGTCAATGTTGGCTTGTTGTGAGGTGTTCTCTTGTTTGAGGCTTCTTGCTAA
TTAGTACTCCCTCTGTCCTAAAATAAGTGTCTCAACTTNNTACTAGCTCTAGTACAAATT
TGTACTAAGCTTGAGNNNNNNNTTTTGGGACGGAGGGAGTAGATGGATTATTAGAGTTCA
TTTGTCATGTCAGTTTATAGCACTTGAGAGTAAGCAGGGTGGTTATTTCAACACTTCTTA
ATAAGACAGCACATATGTTTCAATACAAAACATAGATGAAGTAACCGAACAATGAAAACA
TGTGATTTAATCTCTTGTGCATGTTTGTATTTCGCACAGACCCCGAACTCTCCTGTTTCT
GCAGAAAGTTCTGCAGGTAGAAAGTCGAGCAAGCGGATCATTCTGGTCTGTCAAGGGGCT
ACACAGAGCAGTTCTGAGGTATGGATTTTCCTTGTGTGCCCGCATGCATGAAGAATGTTG
CACACTTGCACTTGTTCTTGGGAGCAAGCCGTGAAGTCACCAGGATCCTATTTTCTAATT
CCTGGAATTATAGATCTAGACACCTACAATGCACCATTTGTACTGTTTTGAGTTACATAT
ATTGTCCTTTTGAACTCCAGGGTAGTTTAGGCGGAGTGGGTTATGCACCACTGAACATGC
TAGGTGTTATACAGGTAATTCACATTTTGTGTGTCATACAGCACCAATTTATTTCCTTTC
CAGTACAACAGCTAAGCTCATATTCGGTCACACACTTTCAGGCTCAGAAGACCGCGGAAC
TGCTTCTAGATCTGAAGGTGAACAGTATTATCTGTAGCCCACAAGTCGCAGCTGTTGATA
CCGCAACTGCCATATGTGAGGTAAATACAAGTTTTACTAACCACAACATTTAGTTAGTTG
CTTTCTATCTTATTTGTACCAAATTTTCACCTGCGCAATCTGATCTCATGGAGTCACTTG
CAGGTCCAAGAGGCTGCTGATTGCCTAGGTGCTGACTGTGTGCCTCGTTACGTTGAAATG
AAGAATTTGCTCGGACTCGAAATTGATGATGCCTTTCTGACGAAACAAAAGGTTAGACCA
TTTACAATTTCTGTGTTTTTTTTTGACAACTTACAATTTCTCTGGTTTATGATTGAGCGG
CATGACGCTAGCTCTACTTTGAAAGCCATTTATATGTCCTGAAAGGCTGAAACGTCATTG
AGATGAATTCATTACGAAGACACCACAAATCGCGAACTATACTATAATTCAGAACTACTA
TTAGAACTGATCATACACTTCATTTTCTTGTTAAAGCTATCGCATGTGCACATTGGCTGG
CAGCTTTCTCTAAGGGAAATTGGACTGTTACTCGGAAGCTTAACAAAATCGAACATATTT
AACATTTCCGGGGCTGAAAATTAACAATCTCCCCCTGCTTCTCTGCAGAGCCTTGAACAG
ATAGTTCAGTCTGGTTGGATGGGTGGCATGGAACACCAAAAACTGAAGACATTGTGGGCT
CAGTCAGAGGATGCATGGCAAGCTTTGGTAAACGAATTGCCAGATGGTGATGGCGCTGAG
TCAGACCGAGTCGTTGTCGCCATCGGCCATCCTGCCATCCACCTGGCACTGCTCTGCAGG
TGCCTGAATCTAACAATGGATTACATGCCGTCATTCCATCTGGACGACGGCAGCATCAGC
GTGATCGATTTCCCGGATGGGCCGAAAGGAGGAGGCATCATCAGATGCACGAATTACACG
GCCCATTTGGGCAGATGGTCGGTACCCATCACAAAATCAACAGAAAACAATGATGAATTC
TGAATTAGTTCTTGTACGAGGTAATTAACATTCTCCATTTCTTTCACTGTAAAAAGAAAC
ATCTTCCATTTCTTGGTGGGAGTATGATCCTTCAGGAATATGAATGGTGCCTGTAGATAG
CATACACCGATGTAAATGGCATCTTCCTAGATTTTATGTGCGAAAATCATTTAATTTACA
TAATATATTTGCTCTGTCCAGCATAAGTTTCCAACAGAAGATTTCTCCAATATTATTTAT
GCTATTTGCATATCGATTTTAGTACTTCCTTCATTTTTATATACAAGGTCACAATAAAAT
ATACATTTTGCACATATACAAGGCCACCAACAGTAAATAAAGCAAATATTAATGACATTG
ACTCGTACTAGCAACCATGATTTAACTATTCATACCCATGCATTGGATGATAATGACACA
TTCAACTACTTTCTTTCTCACATTCACTCAATTTTTTTTAATTTGCATGTGTCCTATTAA
TTACTTCCTTCGTTTCTAAATATAAATCCATTTAAAGATTTTATCACGGACTACATACGT
AGCAAAATGAACGAATCTACATTTTAAAGCGTGTCTATATACTCCCTCCGTCTTAAAATT
CTTGTCTTAGATTTGTCTAGATATGAATGTATCTAGTCGCATTTTAGTATTTAGATACAT
CAATTTTTAGACAAATCTAGGACAAGATTTTTGAGACGGAGGGAGTACATTTGTATGTTG
TTTTTAGTGGAATCTCTAGAAAGACTTATGCTGTGTTTGGTTCAGTTTTTTTACCAGCTT
TTGTTTTGAAAAACTAAAAGCTAACCAAAGATGTAAATTGAAAGCAACTTTTGAGAATCT
GTAGCTTCCTCCTAGTGTAAATTTCAATGGATACCTCAACCTTTTAGTTTACAGCTTTTT
CATAGCAGCTTTTTTAAAATCTACAGCTCAACCAAACACAACTTAAAGGCTAGCTTACAT
TTTGAAATTGAGGTAGTCTATACTACTAATAAAAGATCAAACGAAAACTTCTCTAAGTAC
ACACAACTATTACCCCTACAAAAACAAACACCAACCACCACCACACAATTAGTCAACAAA
TTACAATCTAACGGCCTTCCACCACCCACGCAGCACCACCGTGTGCATTTACCAAATAAA
ATAAGGCTGACCGTGCTCCACCTCCTCGCTCAACCCGCTCGCCTCGCGCC
