Contig Data
morexGenes
Links



Map Locations of contig_6566 (3369 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map locationNo map locationNo map location




Predicted Genes from contig_6566

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_74348 1 555 bp MLOC_74348.1 Available Available None
MLOC_74347 1 1335 bp MLOC_74347.1 Available Available None
MLOC_74349 1 177 bp AK361413 Available Available None





CDS Structure of MLOC_74348






CDS Structure of MLOC_74347






CDS Structure of MLOC_74349






Contig Sequence (3369 bp)

>contig_6566 3369 assembly3_WGSMorex_rbca.fasta
CGGTGGTGCGCGCTGGCGGTGCCGGGTGCGCCCGCCGCGGCGGCGGCCGCGGCGTGGACG
GAGACGGAGGCCGCTGCTGCAGGGACGGGAGGCCGGGAGGAGGAGGGAAGGCCGGTGCCG
CGGGGAGAGCAGGGTGAGGGAGGCGGTAGGCATCGCCACCGCCGGCATTTGATCCTTCCT
TCCTTCCTCGGGATCGTCTGGAGGGGGGGCGGAGGTTTTGGGGGTGAGATCTTCCTCGCT
CCGGCTTTGTACTGCCACTTATCTCGGGGCGGTTCTAGAACATTGGTGCTGGTACCATGG
CTCTGGCGCTAAAACCGGCGGAAGCGAAGAAGAATTCCGGCCGGATTTTGTCAAGTGAGA
ACCGGAGCGAGGCGGCGGGTGCGAGGTTGCGTGACGGCAGAGCGGAGCAGGGCCGCGGGT
AGACCGGAGAAGTGGAGGGCGCATGGCGTTTTCCCGGCGTTTCTGTGGTGGAGCTTGGGC
CAGCCAGCCACACGCAACGTCGACCCCTCCCCCCACAGGGCCAAGGGAGAAGAGAAGGAA
GGAACGCCCCGACCGACCGACTGACCCGTGAGAACGACACGAACCAACCGACCCACTGGT
TTCAGACTCAGAGGAAGGTAAAATTCACTGTTTGACCTTTTTCGAAAAGTTAACCCGGAT
CTAACTCGGTTGGAAAAAAAATCGGATTTGACCATTTTCTACGGCTAGAGCCTTGCCGGT
AGGGTATAACAACCAACCGCTGAGGTCCCTATCGGTAGGGTGTAACAACCAACCGTTGAG
GTCCCTGTCGGTAGAGTTGCACGCCTATCGTAAAACGATTTGTATGTTACGGCACAGTAC
GTGCGAGTGCCTAACGTCGGACCCCTTGATAATAGGGTCACATGCGCTACCGCCAATCCC
TCTGAAGGTAGGCAATTTTCCTACCGTCAGAGGTCTCGGAAGCAGGTCGTTATACTCTAC
CGTCAAGGACTCTGATAGCATTAAGGGTCAGATCCGATTTTTTTTTCCAGCCAAGGTCAA
AACAGTGAATTTTACCTCACGGGGATGGATTCACAACAGAATACCGGCCGAGATGTTTTT
CCAATCAGGCATCCGTCTTCATTTAATAATTTCTTAGGCCCTGCTTTGAATGGGTGTAAA
TTCTTACACCTATATTTATTCTACAAATGTAAATTACAGGGCATCTCTTTATTCCTGTCT
GAAATTAAAACGACTGTAGCAGGTCTGTATTCAAACCAGTCAAAAACGAGCTGAAACGGA
AATACAAAGTTCGCCACCAATACAAGCTAGATAAGGAGAGGGGGGAAAACGGGGAGGCCG
GTTGGCGCGTTGCCAGGAAACACATTGCAAATGCCGGACTCAAAAATATATATCCGCTTG
CTTACGAGGCGAAAACCTGGCAACACAGATCATAGTTGAGTTTAGAATACCGGGGCAATT
CATTCAGATTATGATCCTGAAAACACAACCGGATCTTTCCATGCTGGTGAACACAGTTGG
TACCATTCAACGCTAGCTTCGGGTAGGACACAGTTGGTACCATGCTGGTGAACACAGTTG
GTACCACATCTGAAATCACATAGGACGCAGCTTCGGGTAGTACAATTCAAACGCTAGGTT
CCAACGAAACCAGTGCATTCCCTCTTCCCATTAGATACACAAAAAGTAGGATGCTAAAGG
CTTGGGCAACATGGAAACTGATTGACGTTCACCCAAACCTCAGCTTCAGTAAAGAGCATA
CCGTGGCCAATCATGATCCTGCTTACACCCATGGAAACTGGACAACACAATCACTAAAAA
TTGGCAAACTCCCGCGGCAATGCAACAAGCTAAGAAACACTTTCCTCTAAAAAAAATAAT
CTAAGAAACGCGACAGATAACCAAAATCTTCTCAGAAACTCCATTCCAGCAGATACATTT
GTACTGATCACCTCACCACCATCAACATATCAGTGTGTGGTGCTTAGTGACTTCAAAACA
TCTCACAAAAAGAGTGACCACAAGATGCATCATGGTGCTCAGTGACTTCAACGTGCCACA
CTTGCACAACCTGTCCTTAAACCTCTGCAGGACACCAACTGGACAGTTGTTTTTACTCTC
TGTGACAGCAATATAGCCTAGGAAATCTTACGGCGGTACTGGACATTCAACAGCTCACAA
AAAAACAGTGACTCCTCTCCATGCTAACCGGCCAAGGTGCGTAATTCTTAGTCTGTGATA
ATTCTTGGACAGTACAAAGTTCATCCTTAGCAAACGATCCATGTCCACTTGCTCTTGCTA
GCATGGGATTCACCATCACTCTGTAATCCTAAAGGTGAGGAACCAGACATTACAGGAAGT
TCTACCAACATCACTAGCAGATCATTACAGAAAGTTCTACCAGCATCACTTAGCATTCAA
GAGGTGCATTTTAACAAATGTGGATATCATAACCATGCTGATGATGTTAACAAATGTGGA
TACCATATGCCCGTAGCGGACATTCAACAGCGCAGCAAACAAAATGTGCCTTCAGACTAA
CATGCCAAGGTTGATGATGTAATAAAATGTGCAAAAGAGGTGCATTGTGAGTCTGGTAAT
TCTTGGACAGTGGGTAGACCGTCCATAACCAAATGCTCCATGTCCTCTTGCTAACATAAG
ATTCACTATCACATCTACGCTATACCCCTACTCATAAGGAACCAGATAACAGTAAAGCAA
GAACTAACAGCAATAGATCATCATGGGAAGATCTACAAACAGTACCATCATCATAACATA
AAAGGTAGCATTCCAGAGTATCCAGGATAACAACACAGACTAACACACTGCAAGTTCCCC
CCAGGCATTTCGACGAACACATGGTGGACACCACCAACATTAACTAGATCCTGACCGAAA
CAAACCAGTGTGCGACCGCCCTTTTAGAGATGAAAAGGGCATGGGGTTTTCGCGAGGTCG
AACCCCCGGTCGCCGCTGCCCTCGCCGGGGGCGATCACTTGGGCATCATCAGGGCGGCGG
CGGCGGCGGCCGCGTCCTGCTGCTGCTGGTAGTTGAGCGGGCGGCGGAACAGCATGATGT
GCGGCTCCGGCCGGTGGACGGCATAGTGCACCCACCCGCGGCTCTGCTGCACGCCCAGCG
CGCGCCACTCGTTCTGCAAGGGTAAAAAAGGCCCAATTTCGCAACATCAGGCGACCGATC
CGGCGAGGAAACGCGATCTTACGGGAATGCGGACGGAAATCCGGGCGGTTACCTCGGCGA
GCAGGCGGTTCTTGGGGAGGAGCTTGGCGACTTCCGGCGGGAGGACCACGTGCCTGCGCG
CGGGGAAAGCGGCCGTGTTAGTTCGTTAGGGTTTCGCCATCCGCGGCGCAAGCGAGGAAG
AAGAGGGGG