Contig Data
morexGenes
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Map Locations of contig_65632 (6410 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map locationNo map locationNo map location




Predicted Genes from contig_65632

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_74333 4 1706 bp MLOC_74333.3 Available Available LOC_Os12g10850.1, FRAME:-2, EVALUE:0.0, 13112.m01154 protein hhH-GPD superfamily base excision DNA repair protein, putative
MLOC_74334 1 531 bp MLOC_74334.1 Available Available None





CDS Structure of MLOC_74333






CDS Structure of MLOC_74334






Contig Sequence (6410 bp)

>contig_65632 6410 assembly3_WGSMorex_rbca.fasta
ATATATAGGCATCTCCAAAAACCAACTGTTACAACATTATTGCCCANNNNNNNNNNACCA
AAATGAATCTCGATGGTACCGAGTTGCACTACATGTGGCAACTTTTGAATTTTCGGTGAG
ACCGATATATGAATCACGATGGTATCAATTTGATGACTAGGGCAGTTTCCAATTCTCGGT
GGTAGCGATTTCAATCTCGGAAGTTCCGGTTCTTAAAATAGAGATACCGGAAAGTTGGTC
ACTGTCTTTCGGTGGCACCGATACGAAAGTTGGTGGTGCCGATATATTAGGGTTTGATAA
AGGATATGTCTGGTGCAAAATCGGTAGGGCCGAATGAAATAACTTAGTGGCACCTATTTT
GCCGTTTTGGCTTGGGACAGAGATTTTGTAAGAGAAATGCTTAGTATTTTTGGTGGCTAT
CTCTAAGCACTTGAGCAAACAATTCATCGTAATATCTCACCCTCTTTTAATAGTATTGGC
TTTTCTATGGGCTCAAAAGTGATTTTTCACAAATGTAAAATGTAGAGTCATCTTGCTTGA
AGCTTGACCAATCATATTCATTTCCTTGCATCAAGGGGTTTCTCTTCACAATCCTTTAGC
CAATGCATCTTTGGATTTTTTTGAAATATACTTGGATAAGATTATTAATTCAATGATACA
TACGTTGTTACTAATTATCAAAACCATCTTAAAGAGCAATTGTGCTTTCAACATTGCCAC
CAACTCTTGTTAGTCTTGAAGTTGTTTCTTTCCCCTCTGGCAGGGCGACTGAACACAACC
TTCCTTACCTCGATCTTCATTGGTGAGTCCATGGATTCGCCTCCTCTCTGCATGTTCCTC
CGGCGGTAGGTGATGAAAAGGGGAATCGTGGTGCCTTGGCTCCATAGGGTTTTAGTCCGC
GCAAGATGTCAACTGTTTTTATCTTTTTTGCGGGCAAGAGAAGTCAACTGTTGACTCGTT
GTGTTTCAGTTGGAGCACATTTTTCAAAGTCCGACAACAATGTAAAGAAACAGTGTTGCA
TGATGATACGAGCTTCCTACATTTATCCCTGGTGATAAACTGATACAGTTGTGAACAATT
CCAAATACTAGTACTCCAGGAGTACATCAATTCTCGGGAAGATATAATGCCTAGAACTTT
TCTTGCAAACGGATTTGATGATTAGGGTATTATAAAGGGAAACGTTTGGAGCTGGCGCGC
TGGCCGAACCGTTCGCCCGGCCGCGCGCAACCCGCGCGCGTGGCTGACCCAGTCATGCAG
TTTTTTTTCGTTTAAATTTATTGCAACCGACGTTTAAATTTGCGACAAGCGTTTAAATTT
GCTACAATTTATCCATTAAAAAGTTACATACACGTTTGGTTGCAACCCAAGTTTGTTGGA
TTCTTTCGCTACAACTAGTGTTTGATTTTAGTTACAACCGGTGTTGATTTTTGCCACAAC
CGGTATCAATTTTTGATACAACCGTCTGCATACACGTTCGTCAGAGTTGCAACCCGAGTT
CATCGGATTGTTTTGCTACAACCCACATTTTGTTTTGCTATCACGCATCATGAACGTCGT
TTTTTGCTACAACCACGTTGATATTTTTTTGATACAGCAATACTTTTGTTGCACCCGTGG
TCAAAATTTGCTACATCGTTACTTATTTTTGCTTCAATCGATGATTTTGCTGCATGAACA
GATCTGGCAGTAAAACCAGATCCAATCTGAGGTCGGACGGACCGCGTATAGCCGGCCGAA
AGTTTCAACCGGTGCACCAACGCAGAGCAGTGCCTATTATAAAAGGCCGTCCGTTTCATG
ACCAATGGAACCCTGAGTACATTAGAACTTCAGAAGACGAATCTACTTCGAGTTAACAGC
AGAACATAAAAACTCGATGGATAAGTTCTCAGCGGGAATGCTAGAAATTCGAACGGCCTT
TCTAACAACAGTTCGCTCATGTGCTGAGTTTTGCACTTATGTTACTGCTTTTGCCGTCTG
TTCCTTTTCTTCGTGGGCATTTGGGTTTGCTCCGATAGTTTTTTCTCCTTGAAAGCCTTC
ACCATATTGTAAACCTGAAGCGAAGCATCCAAGTTACTTACAGTTTGAACAAACTCGGAA
AATTTTGACATTCCAGATATTTGAACTGCAATTACCTTCCGAATTCCTGATGTCAGGCCC
ATGGAATCAATTGAACTTTCATCGACGAGTTTCAGTTTCGTGCTATCTCGTCCCTTGTTG
CATACTTGACCCATATCACCTACAATAGAAGAATCAATTAGGCTGCAACATTAGAAGCCA
ACTGCTAGTGAGGACAGCACAAGACCCACCTTTGATCTTGAGAACCATCAGCTCCACATG
CATCGTCAAGCGAATGTGGGAGAAAACGTGAACATGCTGACCAACATCCTCCCTGAGGAC
CAGATTGGATTTCTGTTCAACATCTATGTCAACCAACCGCTTCAAGTACCTATCCATCTC
TTTTCTCCTGTTTAGCGGATCGGTCTTACATTCGTCAACAAGAACCGATGGGAACTCCCA
GAGCCCTGCAAGCAGCCCCTCTTCTGGCCTCTTTATCAAGAGAAAGAAATTACATTTGCC
GGCTGCCATCTCTTGCTCCAAACCTTGTTCAATTTGAACAACACAAACAGCAGCGAAATC
ACTACGCGGTTTAGCTTTGGGGACCACCCGTGGGTAGTCTGTAACTCCAATCAACGGATT
TTCATGAGAAAGCACAAGCGCTTGGCAGTGACTAGAGACAGGGCACTGGGAGCAATCAGG
CTTGGTCTTGCTGCACAATGTTGCTCCAAGTTCCATCATCGCTTGGTTGAAGTCTCCTGG
CCTTGATGGATCAACCAGTTGACCAGCAAGCTCCCTATGATCCAGCAATAGTGCCCAAAG
GTATTCTCGTATCAGTATAAGGCTTTCAAGCCGTAAATTAGGTATATGGGCGAGAAAATG
GTTGCAGCAGGATCAGTATCAATATGGAACCAAAACTGGATGCAGCTTGCACTTAAGTTG
GGTGAAGATTGGCAGCCATGAAACAAGCTTATAAATTCATACACCAGCAATTGGTAATAT
CAATTGATGGTATAACTCCGTACTATACCGATTAGTTGTATGGTGCGGAAAATAAAATTG
ACGATACATTACCATACTGATGCTATTTCACACTAAATGCTAAGCATTATTACAAATATA
TGACATCGTAAAAAACCACTACCACGATTGCTCTCCAAGGGATCAAAGAGGATCGTGCTA
CTTACCAGAATCTCTTTACTGTTGATGATTCTTTTGGGTTATCGGCAATAGCAAAAAGTC
TGCTGATAACACGTACAACATTTCCATCCACAAGTGGGGTGACCTACAGTACAGAAATGA
AGCAAAAATCATTTGAATATGCAAAAAAAAAAACACGAAGATGCTTATTTAAAGACGAGC
TATATGGTTGCACAACCTCATTGAAGGCTATGGAGGCTATGGCGCCTGCTGTGTAATCCC
CGATGCCACGAACCTGACGAAGTGTTGATGCTGTGCTAGGGAATTCCCCCTTTTCCGCAA
TCTGCTTTGCTCCCTACTTCCACATAAATAGAAACACATCATATGCTTAATCCACTACGC
TGCAACGTTCTATGATCGAGAAGAAATGCAATTTTATTTTTCTGAGGATTCCACTGAAGA
TAATTTACAAGATGAAAAGTAAATCAGAAGAAAAAGGCCCAGTTACTGAATACCCATGTC
AAGGATATATTCCTCCTGAACTACCCAAAACATTATCTGATGAGCTGACAACTTGGCACT
GGCCAATAGCCATAATGCAACAACCTCATGAGCTAGCACTAGAAGCTCCCTCAATTGAAG
GGAAAATGAGAAACCGAATCAACTTCCAAGCTCTCCCAAGCAAAACGTCAAACAGGACAT
GGGCACTGTGAAGGTTGCAGAAACTAGTGAACAGCGCTACAATGGGCACCCCTTTCCTAG
GGTTCTACGCGTAACAGCATCCAAATCTCACCTCCAGAAGAAACCGTGCCCTCCGGTAGT
ACCCAAGACCGGCCCACATCTCATTCACCTCCTGCAAAAAGGAAGCCCAAATCAACCATT
CGATCTCCGCCCGCAAAATACGGATCAAAGATTGAATCTTTCGTACGCAGGAGGTGAGCA
CGTTTCTCTCTTACCTCCTGCGTGGCGGCGGCGAGTGTCTCCACGGTGGGCCACCGCGCC
ATCCACCGGGAGTAGTAATCGATGACGACGGGCACCCTCGTCTGCTGCAGCATCACCTCC
GACACCCACACCGCATACGCCCTCTTCTCTCTGCCCTCGCGCCCCGGCGCGGCGGGGAAT
CGCCACGGAAGGTCGCGCCGGTGCGCGTCATACCACCGGAGCAACCCCGAACGGAGCGCG
GGCGCCGCCGAGGTGGGCCCCGCCAGGACACCAGACGGCGCCAGGTCCTCGATGTCCGCC
GAGGGGGGGACGGCGGCGGAGCGGGCACGCGGTTTTCTGGTGGGCCGACGGCTGGTGGTC
GCCTTGGGGCTCTTGGCCATGGACTCGACGCGGCGGAGCGCGATTTTGAAATGTCGAGGG
GTCTTGGCGCCAGTAGGGATTGGGAGGAGTGGGGAGCGAAGAAGAAGAGTCTTTCTACAC
TCCAATCAAGTTCACTTATACAAACCAACATCTGGTTAGATGGTTAGAAAAACATTGATA
TTTCTAATATATTAAGATTTAAGTCATGTTGTTTATATTATTTTTATATTTATTTTAGAA
TTTTCATCGATATGATTTCAGAGGAAAGAAACGTTTTGGTCGACAAATAGATGCGTACGA
TGACTTTGTAAATCTCAACATGATATACGTGTTCAGTCTTTCAGAGATACTCATAAAGAT
GAATGTATGTGTGTGTATATGAATGCTTACGTTTATTTGTATTAAAAAATCAAGTCCACT
TATTTTTGAACTTTTTTAAAGTAGTACGTATTATTGTACATTTTTTTTGACGCAGTAGTA
CATATATACTTGTGCGCAAAGATGGCCATCACAGGTCGGACGGTCAGCTAGCACGCCTCC
CGACACCCAATCGCGGCATTGATGGGACAAATCCGGACACTTACAAAAGGAAAACCCTAT
TCGTCGCTCGTTGCGTCGAATCATCGGGGCTTCGCACAAGGGCAGTGATGCTCCCAACAA
GATGGGTCGGCCCAGTTCCAGCAGATCGCCCCGGTTTTGGGAACCTTTTAGAGGTTCTCA
GCCGGTTTTCCGGTTTTGGGAAACTTCTAGAAGGTTCCCTGAACCGGATATTTTTTCAAT
TTCTATTTTATTTATTATTTTCTGATTTTATTTTCTATTTTTGTTTCAAAAAATGTTTTG
GATTTTAAAAAATAATCAAAAGTGTGGGAAAATAAAACCTACCTTATGTACAATTCTGTC
TCCAGCATCGTTCCCTCTATATATCTCGGAATGACATTTACGTAGGATTCGTTCATACTC
ATGCTCACGTACACAACGTATAATAACACCATCTACTTCTTCTTTATAAAGATGTGGGTC
ATNNNNNNAGTAATGTCTTAAATCAAATAAGAACTTTTATTTTGTTGGTATGTGAAAGTA
GGTGGTAAGTATTTAGCAACAATATAATTAGAATAATTTGCATGCCAAGGAGTACTATGG
GAAGCAATTATAATAGCCAATTTCTCATCATAAAAACTATCATCAATGGGCAGTGGGTCA
TCAAGAACATTCTCCATCCTAGATGAAAGATCTGCTACTAGATTTTTAGCTCCCTTTCTA
TCAAGAATATGCAAATCAAACTCTTGAAGTAAAAGAACCCACCTAATTAGTCTAGGCTTA
GCATCTTTATTTTCCATAAGGTATTTAATAGCAGTATGATAAGTGTGAATAGTAAATGTA
TAGTCAACAATATAAGGTCTAAACTTATCAGATGTGAACACAATTGCTAAAAATTCTTTC
TCAGTAGTAGCATAGTTTCTTTGAGCATCGTCTTACTAGCATAATGGATAACATTCAATC
CCTTGACTATTCTTTGCCCTAGAACAACACCAACACCATAATCACTAGCATCACCCATAA
TTTCAAAAGGTAAGTTCCAATTAGGTGGTTGAATAATAGGTGGAGTAATTAAGGCTTTCT
TAAGTATTTCAAAGGCTTGTACACAATTATCATAAAAATAAATGGAATTTCTTTTTTAAG
AAGATTAGTCAGTGACCTAGAAGTCTTTTAGAAATCTTTAATAAAGCATCTATAGAAACC
AGCATGGCCAATGAAGCTTCTTATACCTTTCATATCTTTAGGATATGGCATTTCTCAATT
GCATCAATTTTAGCTTTGTCTATCTCAATGCCTCATTCAGAGATTTTATGTCCAAGTACT
ATGCCTTCATTCACCATAAAATGTCACTTCTCCCAATTCAAGACAAAATT