Map Locations of contig_65579 (6252 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_65579

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_74315 6 1554 bp AK374210 Available Available None





CDS Structure of MLOC_74315






Contig Sequence (6252 bp)

>contig_65579 6252 assembly3_WGSMorex_rbca.fasta
TCCATCTCGATCCTTTTCAAAGAGCTCGTCGTAAAGGGTTACAACGATGCAAGCTTTGAC
ACNNNTCTGGATAACTCTGAGTAGTAAACCAGATTCATATAGTGGATCAGTCATTTGGAA
TAGTTCCAAATGGCGCGTGGTAACAACATCTATACGATGAAATAGAGATTTGTAAAGCAC
ANNNNNNNNTGAAAGGTTCAGACCCGTTGACTGAAAACCTCTCTCACAAGAAAGACATGA
TCCCATTCAGTAATTTGCACAAGCAAACGAAGGTTGCGATGCCACTTTGTTGGGGCTGAA
CAGCAACAATGAGCTGCACAAATTCACCTACACGACAAATATGCACACTACACAGCACCC
TTCACTTGTGATGAACTTTGAGCACAACTTCAACCAACAACTAAATAGCAGAATAACACA
AACAACATGCACATGTGACACAGGATTTAACATGGAAAAACCTCCTCAAGTTGAGGAGTA
AAAAACCACGGATGTGGACCAACCGGTCCACGCAACTTCACTATTAGAATGATGAGTACA
AAGTCTTCTCTAGAGCCTCTAGAGAGAGTTATAACGCACTCTCCACAATGTCAATCGGCA
ACAGTAACAACAACCACAAGAGGCAAGATTTCAGCAAAGCAGAGTACACACAACTTCTGT
CGCCTTCAGTATTTTGCAAACTTCTCTTAAACCGCTAAACCAAACAACACCAAATTTGGG
AGGCAAATAGACACACGAGTTCCTCTGATCCCCTCAAAATTTCAGCTCAATCGGACATCG
TTTGCCTACCGGACATCGTTTGCCTACCCAAACAGTTTGTCTCGCAAAACTTCTCTGTCC
TGAAAATGCATCAGTTAGAGCTAACAAAACTACTCTCAGATCTGACGCTCCACTAACCCA
ATCCTCAAACGAGCTAACCAGATCTAAATTCTCAAAGTAAGAAACGAGCTCACAAAGTTT
GAGGTCGATCCAAGCACGTTTGAGCCTCCAATCACCAGGTTGAACACTGTATAGTCAGAT
GCACCAAATCTGTACAGAACCTCCACTTCTTCTTCTTCCTCTTTCTCACATGTTGTGTTT
TCTCTTGTGTGCTCTATCTCACTCTGCTAAATGATAGCTACCACAGGCAGGGATGGAATG
GCTAGGGTTTTTTTCTTGCTTTCCTTCCATTGAAAGCATTCTCAACTGTTGGATGCAGCG
AGGATCAGCGACTGACATGTGTTAGATTTATGGACTGATGTTGTCCTGCCAACACACCTC
TATGTGAAGGAACTGAAATAGATTGACACCACTTCAAAACATGGTACATGTGGAAACGCA
ACAAATAGAAGGAATTATTTCTTGACACAAATTTGTATCAAGGACAACTATAATTTTTTG
AAAAAACATGCATGTATATTAAGCTAAAGAGAGAAAAAAATGGCTGTCTTGTTTGTTGGA
TTACCCGTTAACACGATGTATCACGGGCTACTTTTCACCATCAGTTCCGGTGGTTTCTTC
AGTTGTACACAGTTTGGGTATATGTACAGCCACATCTTTGCTATATGTACTTGAACCTGT
ATTTCACAGCTAGCTTTGAACATGTTTATCTGACTATTTGATGCGATGCATCAACTTCAT
TTGCGATGCCTCAGTTAGAAGTAGTACCTTTTGTTTATTCTATAAAAAGTTAATGTCTAT
ATGACATACTTATTTCTTTGCTCCTCATTCTCCATCAACCTGGTATGAAGAAACTATCCC
AATTCTAAAAAAAAAATCTCAAGTTCACGGTTTTGGAATGATGTTACATAGCCCTCTCAA
GTTTCAAAACTGGCTAACCAAGAATTTTTGTAGACAATCCAAGATTATATAAGAAAAATG
GTGTGTAACTATGTGTGTTCTTTGTACGCTAATTTCATTCTCTTGAACTATCTTGCTGCC
GCGTGCAAAACTGAACATTCCGCCAAAGCCTCCAGGGACGGATCCAGGATTCGGCCTCGC
CCCGGGCCCCAAGCTTGCAACAGTATCAGTACAGTGCTAAACAGTATCTATAGTGCTCCC
TGGCCGCCTATCTGCGTCCCTGGCCGCCTGCAGCCTAGCGGTCGGTCGGCATCAGGCAGG
CGCGGTGCCGGGTTAATCGCGGGCACGTTTTTGGCGCGCGGTCGCCACTGGGCCACGCAC
TGGCCGGCTACGCGCCGCGTCGTCAGAGTCAGACACGGACAGGGAGGAGGCACTGTCCCT
CTGCAGAACATGCATGCATGCATGCACTGTGGCACTGTCTGTGCCGACGCAACTCGCCTC
TGCTTCCCGGAACGTGTCGCGCGGCTTTCGGCAAGGTGCGCCGCATCGCATGCATGCATG
CGCTCGGCTCGGGTGACCTCAATTAGTGCCGTGTCGTCGTTGCCGGTGACGATCAAGGAA
ACACGTGCCGTGTCAATCTCTGCCAAGCAAGCACCTTGGCCGCTGACAGAGATTGACTGG
GAACGGCTTAAGCGGGCGGTCGCGGCACTAATGGTGCACTGCATCTGCGTGCTGGCCCGG
CTGACTGACAGGCTGATTGACTGGCTGGAAGGAACCAAGAGCCAGCCAAACGTACGTGGC
AGTACCGACTCCTCACCGTGACGCATGTACGCACGCATGAACGCACGCACAGGCTTGTTG
TACGAGGTGAGGCGAACGTGGGCGCCCAGCCAGATTCGGTGCACTGCGCTTCGTCAGTTC
GATCAATCATGCATGCATGGTACCCGTGTCTGACAGAACTCACAAGCCTGGGCGGTGTGA
TGGCGCTGTTGTTACCTGTTGGGTCGTCAGCAGTCCATGTGTGATGCGGCCGGGTTGGGT
CGCAAGCTGCGCTGGCTGTTGAGACACACTTTCACCGACAGCCACCAACAAGGTTGGGAG
GAAGAAGCTTGGCACAAACATTCACCGACAGGGATGATTCGCTGGCTGTTGAGACACACG
CAGCTATGCAAAAACAAATCTACTAGGTCGCACAAAGACACTGTCAAAGTACTGTAGTAA
CAAGATCCGGCGTTTCCCAGGAGACAGTGGAGTTTAATAATGCGGCTAATCTGACATCAG
AGGAACTGGATTACCTCTTGTGTTCTAAACAAAGCAGCAGGCAGTGGCCGGCCCACCCCA
TGTCGCCTCCAACTGTCCGTCCGTCCCCACCGGCAACCTCGGCCTCCCAGAAAGAAAGAA
AAGAGGGCCACCCACCACGATCACACACACCAATATATATACACACCGCGGAGGAGCAAA
GAATCAAAGATGCAGTAGCTACTTGTCTCTCACACGAAGCAACACAAGAGTTTTTCCTTC
CTCTTCCAAGGAACCCAACCAAAACACACACGCACACAGAGAGATGAACATCCACTAGCC
TCAGATGGACAGAGGCGTCCTCCTGATGATCGTGCTGGCGGCGGCGGCGACGCTCCTGTG
CCTCCCACTGGTGCTGCCGCCGCTGCCACCGCCGCCGGCCTTCCTGCTCTTCGTCCCCGT
GGTGATGATGCTGCTGCTCTTCTCCCTGGTTCTCTTCCCCTCCACAAACTGCGAGTATCC
TCCATCTCCCACCTTCTCCCAGTAAGAACAACATACGGAGAGAGCCTTACTGCCAGGTAT
ACATATATATATAATTCCTGCTCTCGAGTTTTATTCTATCTACATCCATGCAGCTTTTGC
TTGCTTTTATTGGATATACATATACATATGACATGACATGCTACCATACAACACACAACA
GTCAGGTCAGGTGGCTCTCAGGAGAATTTCTGCTCTGCCTTTCAAGCCCCGGCCAGATGA
GGAGCCAGCCATGGTTATGTAGAATTACCAAGAAATGAATGTTGATTACCTAGTCATTCC
TGGTTTTCTCGCAATTTTGTGGCTGAGGAAGGCTATATGTTAGCAAGCCGGCAATGAGAA
CCGCCGCGCCTGCAACAAAGCCGGGAGGGAGGGTCGACGCCACGCTGATGTACGGCAGCG
GTAGAGTGAAAGCGTAGATCGACAGCGGAACTGCATCAAGAAAAGGCCATCATTAGTGAT
CAGTTCGCTGCAAAGTGTGCATGCATACTTGCATATCTACTTGTACAAGGGAACAATGAC
TAGTAATCAGAAATGGAATGCTAGTTGAAAGGTTTATAACTTTTTTTCCCTCAACCTTCT
CGAAGGGCATTTTTTTCTCGAAGGGCCTTTTTTCCCTCAACGTTATGTGTAAGTGCAAAC
GATGAATACCGAAGATACGTTGGAAGCTAGACTATTTATTCATTAATAGTATCTGACTGG
TAGGGACGAAAAACAAGCTCAAGTTAGTCCTGTATTAAAGTCATTTTTGTCCAAAGGAGC
ACACAGGTTTCAGAAACCGCTGATACATGTGCAGACCTCGTTAGTCTCGACACCTTCAAG
ATAAGAACAGGAACTGACCAGGTGGAGTGGCAACTGGGAGGGGACAGTGCATTTTTTGGA
AAAGGGGGGGGGGAGGCAGTGGATAAGGCTTGTGCAGTCGTTATGCAGGAACCAAATAGA
AAACGTGCAAATAATGGTGATGAAGGGTAGCTAGAAGAACTGAATGTTTGTGTTTGTTTT
CCCCTACTTTCAGTCCTTAATAATATTGGTAAGCTTAGTTTTGAAGTGACATGGTGCAAC
TCAGTTATGTGGGATCATGGTCAGCCAACACAGCTAAACTTCTGTCCACGTCCCAAACGT
GTGTTTCTTTTCTGCTGTCCCACGCTTATGTTCTAGAGACTATGAGAGGGGTGGACATAC
ATCCACTGCATGATAGGAATGTTCGCTTAGAAATTTCAATTGACGTTACGTTCTCACTTA
ATGCAATACTTTCTCCATAATCATCATTTTGATAAAGGTTTGCATCGTCCCGTGGTCAAA
ATTCTGTAACTAACTAACTACACCTCAAAAGCATAAATATTACAGAATGATGATACAGAG
AGAAGCAAGTCAGGTATAAAATTCCAAGCATCCTATTATCGTCCTCTCTGGTTCTAACTG
ACAAACTGGACCGCAGCAGAACTGTCATCAGACAGAAATCAATGTAAATGGCCCTCTTCC
TTTGTGAAATCATCACAACTCTCCCTCCAGTATATATATTAAAATGTGGCTTACTATATT
TTACCTGGCCTGATATAGGGAAAGGAACACAAAGATTAATGTGGACCACTTAATGAAGCA
GTGATTTGTGTCCTGATTCCAGAACCGAGCAGTAGCCGGTTAGTTAGAGCACAGACCCAC
AGGGTGCCTCACTTCTACCTAACAACGTACAGTCAAGGGAGGGAACTCCCTTCTTTATTT
GTGTGCTGAAACGAAGCAGGGTGTGAATACAACATCTCAGCTTATATATGGTTACTATAA
GGCTTCCAGATCCAGATTTGGAAGCTGGACGACACACGATGAACAGTATACAATAGTTTT
AACCAGTTGTCAAATGGTACTAGATTTTAGCATGTGTTGACATGTACACTACATATGACA
AACAAAGTGTAGCAAGCCACGATTGCGGCACTGAACCAACCACATGCTTACGGAATCGTG
GCATGACTAGATCAGGCGTGACCTTGGGCTACAAACCAAGAATGCAAATACTTCCTGCAA
GGCCGGTTTTAACTGGATTCAAAAACCTTCCTTTAAAACTAATTCTAGTATGGTACATTT
CAACACAAAAAATGGCAAGGAAATTTATAAAAAAACAAGATATCGTGTGCACGGAAAGAA
TATGTAAACCTGAGAATGTGGAGGCTAGACAAGATACAACAGCCGAAGAAATCTTCAGCA
GGTGAAGCAAGGATATATTGAATGCCATATTAACAACCACAAATAGTAGGGGTAGCAGTG
GTGCCCCTTCACAGCCTGCACAACCCAAAAAAGCTTAACAAGAGGATTGTGCTACATATA
AACATGCTTAGATGCTTTTACTATTTATATAAGTAAAATTCAGGACATGTCACGAGAAAA
AAAAACATACCACTAAAACAATGAATAATCATTGCAGTAATTATAAAAATAATAAATGAA
TCAACTATGGGCAAATAAAATCCAAGTGTTCCTTTTCAAAATAAGGAAGAAATACATACA
AAAATGATGTGCTTTCAACTCAAAGAAGCGAATGATACTTGTCATTAGGTGCTAATTTCA
GAAACTGAATACTGCATGGTAGTTAATCATCAGTTATTAACTTCTTTTCTTAAGAGATAA
CTGCATTTATCCCCCTAGTAACATCTAGCACCACAAACTGAGACAAGTGATCAAGAGACC
CAATAAGAAAAT