morexGenes - Barley RNA-seq Database

Contig contig_65576

Source Contig contig_65576

Contig Data

|Contig Location|
|Microarray Probes|
|Predicted Genes|
|CDS Structure|
|DNA Sequence|

morexGenes

Links

Map Locations of contig_65576 (2859 bp)

Morex x Barke POPSEQ 2013	Oregon Wolfe POPSEQ 2013	Morex Genome Release 2012
No map location

Predicted Genes from contig_65576

Gene ID	# CDS Predicted	Max CDS Length	Probes in Cluster	FPKM by Treatment	FPKM by Replicate	Top Rice Hit
MLOC_74314	3	1956 bp	AK356546	Available	Available	None

CDS Structure of MLOC_74314

Contig Sequence (2859 bp)

>contig_65576 2859 assembly3_WGSMorex_rbca.fasta
CCCCCCCCCCCCCCCCCCCAACGCACAAAGGAGAACGTATACCCACCTCGTATTGTACAC
TGCAGGCCACCGTATGTATGCAATACGAGGTGGGTATACGTATGTTTGTCTGTACTGTAT
AATACAAGGTGGGTATACGTTCCCCCTTCTACGTTTTTTTTTTTTTGGGTGTACCGAAGC
AAAAGATAATTCTCTACAGTATAACCAGATACCGGGTTTCATGAATAACGAAATCAGAAA
CAACCAAATACTTATTTAGCACATAGCTTAGCTCATGATTAAGTTCCAACATAATCAGGT
AGGAGTATGTGGTAAGCTTTCATAGCATTGAAATTGAGCATGTGGTAAGCTTTCCATAGC
ATTGAAATTGAGCATGTGGTAAGCTTTCCATAGCATTGAAATGTGCCAAATGGCCTTGTT
TGCATTGTAGTACTAACAAAGGTTGACGATCATTTCGTACCAGTGGCTCGAAATCATGCG
TGACGAGGATGTTATTCGGTCTCATGTCGCGGTGGATAATGCAGCCAACCCTGCATTCTT
CATGGAGGTACCGCAGCCCCCTGGCGGCGCCGACCGCGATCTTCTGCCGGGCAGCCCACC
CCAATGTCTCCTTGTGACGGCCTAACAAAGAGCAACAACCAATAAGTTCAGTTAGCAGGG
TCATACACTCATTCATTCACAAAAGGAAATATTGGTGCATGTTTCAACAACTGACTTTGT
CACACTGAGTTTTTCATGATGAGATGATTAGCTTACCATACAGATGAGTGTCCAGTGATC
TGTTGCAGATGTACTCGTAGACCAGCAACCTTCTCTTGCCCTCGACGCAGAACCCGATGA
GCATGACGACGTTCCGGTGCTGCGCGCAGCTGAGCACCTCCACCTCGGAGCAGAACTCGA
CGTCGCCCTGCGAGCTACTGGCAAGCCTGTGCTGCTTGACAGCAATGGCCTGGCCGTCAG
GCAGCACCCCTCTATGAACAGACCCAAACCCACCTTCAGCCAAGAAATTTGCTCTGGAGA
AGCCACCGGTGGCATGCTCCAGCTCGGCGTAGCTGAACCACCGCGGCGGCTTCCCGAACA
CCGGCGTCTTGTGTTGGCACACCGAGCAGAGCGGCGGCGGTCCCGGCGCAGGGGTCCGGG
AGAGGGATACGACGTCTCTTACATTTCCTCTGAAGTTGAGGTCTGACCTGCTCCTCACTG
CACTGATCTCGGTCAGTAGGTCCAGCTTGGCGATCTTCTCCAGCAGCGCGTCGGCCGTCG
GGGTTCTTCGACGGGTTGGTGTTGGTCTGGGGGATGCACCGGGCCTCTGCAGGATGTCGG
CCATCCATGGCTGGAGTGACGGCGAGGCTGCTGCCGATGCTGCTGTCTGAGGAGTTGGAG
CTGAAGCTTCACTGTCAGGGTCAGATATTACATTGGCAGTTTCTTCATGCTGGGGATTAA
GACTGGCTGCTTCTCCATTCAGAGGGCTACTATCTGTTTCTGAAGCACAAACTGTAGTGG
TAGTGCCAAGGCGTGAGCTTGCGGCGGAGGATGCTCCGGTGGAATCGTCGAACGTTTCGG
TGTCCGGTGAGCTGCCATCTGTTTCTGAAGCGAACAATGGAGAGGTTGCAGGGTCTGTTA
AGCTTGACACAGAGGCTGCATCGGCATTCCTGGTGTCTTCTTTCTTCAGAGAGCTTGTAT
CTGTTTCTGAAGCACACAATGGAGAATCTTTCTTCAGAGAGCTTGTATCTGTTTCTGAAG
CACACAATGGAGAATTGGAAGGGTCTGTTGAGTTTGGCACAGAAGATGTTTCCAAATCCT
TGGATTCTTCTTCTTCTTTCTTCTTCATCATCAGAGACACGTCTGATTCTTCTGAAGCAG
AAAGTGGAGAGGTGCCTGGGTCTGAATTTGGCACGGAGGACGCTCCCCCATCCTCTGTTT
CTTGTTTCTTCTTCAGAGAGATGCAGGTGCCGGCTTCTTCTGAAGGTGAAGCACACAACG
GGGAAGCGCCGGGATCAGAGCTGGACACGGAGGAGGAGGAGGCTACGGCGCCGTCGGTGC
TGCTGCCAGACGGCGTCTCTGAGTCCGGGCTGCAGCTCGGCGTCGTCACGGCGTGTCCCC
TGACCGAGACCGTCTCTTCAGCACTCGGCTCGGGCTGGGGCTGCGGCGGGGGAGCTGCCG
GCTCCGGCCGTGTCTCCTCCGTGGAGCAGGCGAGGTTGAGCCGGAGCACCTTGGGCCGGG
AGCGCCTGACGGCGACGATGTTGCACCGGAGCTCCTCCATGCAGCGCGTCTCCTCGACCT
TGAGATCCCTGCAGTAGAACGGGACACAACACCACCACTGGCGTCAATACATGAGTGCCA
GACAATGCTGAAGAAATGGAGCTCGCTGTTGCTGGCCGCGGCCCCAGAGCGTGACAGTAC
CTGTCCAGCACCACCCAGCTAGCCCGCGCCCGCTTCGCCTCGGCGGCGACGGAACCGGGG
CCCGCGCCGGCGACGATCCGCACCCTCAGGTCCACCTGCACCAAGCTCAGCAGCAACGGG
AGGGCGGCACCTCATTCAGACAAATTTCTTGAGAGAGACGGGGCACAGTGGCGAACGGCA
ACTGACCTTGGCGGGGTCGTAGAGGTCGCGGAGGGTGAGCGTCATCTGGGCGCAGAGGTC
GGAGACGTCGGAGCGCTGGGCCGGCGCGGCGGCGTGGGCGCTGGCGCAGCCCCCCGCGAA
GAAGGGAAAGCTCCACAGCCTTCCTTTACCTAGAGGACAAACGGTAAGAGCAGAGCCTGA
GCATCTGTGACCAGGGGACGACGATGATCCGGGGGGAAGGATCGGGTTATGCAGGTACTT
ACCGGAGGCTGCGGTCGTCGTCGTCGGCGGCGGCGGCAT