Contig Data
morexGenes
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Map Locations of contig_65563 (5386 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location No map location




Predicted Genes from contig_65563

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_74308 1 1106 bp MLOC_74308.1 Available Available LOC_Os09g26370.1, FRAME:+3, EVALUE:5e-38, 13109.m02534 protein DUF581 domain containing protein, expressed
MLOC_74309 1 1139 bp None Available Available None





CDS Structure of MLOC_74308






CDS Structure of MLOC_74309






Contig Sequence (5386 bp)

>contig_65563 5386 assembly3_WGSMorex_rbca.fasta
CCCATGCGACGTTTCCCAACATTAAGGCCCCCGACGACACCTCGAGGAAGGTCACAATGC
GAACTAAACCGCTGCCACGAAATATGAAGAGGATTGAAGGTTTTCACCCGATAGGAAATC
GGGGTGGGTAGGTTGGGCCCTTAGCCGCGCCTTCATGAAGGAAGGCGACACTCATGGGCG
TCGCCGCCGCCGGCCGTCACACCGGAGCCTGCAGCCACAAACCACCGGGGGTGAGGAGAG
AGGTAGCAGGAGAAACGGGAACCTCCAAATCTAACGTCGTCGCACCAACCCACCACGACT
GCCACTGGATCACCGGCCGACCGCCACGTCGCCGCGCTCCAGATGGAGGCCGCCATGGAC
CAGATCAGTGTCGCCTCCCGATCGAAGCGTCATCCACGAGATCGGCTGCCGCCCCGACCA
GGACACCCCTCCCGCACCGCGAGCGCGCCACCCATGACCAGATCCAGACAACCTGACTAG
GGAGCCACCCACATGCAACAGCCGAAAACGGACCCTCCGTAGTCGCTGCACCTTGGAAGA
GCAGCAACACGCCACCACGCTGCCCAGGGATGCAAGCGCTGCCATCTTGCCCGCTCTCCG
CCGTGTCGAGGAGCCCCGCGACAGTCCCATGCCTCGCCTCACGATCCGTCTTGCGCCAGC
CTAGCCTCATGCAGTGAGGAACGAGATCCCCTCCGCCACCTACGCTGACCAGGCTTTGCC
CGATGGCGCCACTCGCCGGCGGCGGGGGAGGAAGACCACAAGGGGAGGTTCCTGCAGCGA
AGCGCTAGGGTTCGCCCCTATCGCCCGCGGAGGCGACCTAGGGTGGTCTCCCAGGCTTCC
AGCTAATACCGTAAGTTTTAAAAAGGAGTCAATTACATTAGTGGTGGTAGAACTTGACGT
GAATGGTCACTTTAGTGCTACAAGTTGTGGTGTACATTGAAGTGATGCAAAAACTTGGCT
TTGTAATGTAAATATGATGCAAAACTCGTTTTAATACATCCTTGACGCTGACTAGGCATG
CCATCAGGCATGGGCCCCGCTGTCAATGACCAGACGATGGGGGAAATCAGTTTTTCTCAA
AAAAAAAAAATGGCACAAAATAACACTGGGATGCCCAGCTGCTAGAAACGGCACAAATCA
CATTAAGAGGAAAAACTGTCCAATAATTCGAAGCGCGCCTTACAGAAACAATTGACGACA
TTTGTTATTGAAGTAGGATGAGTAAGTTAGATATTCCTTAGATTAACAGCATAAATTAAT
TTTGTTGAACACAAATGAAAAAGGCGTGACTCAATTGGCGATTAACCACCAGGCCTGATG
ACATTTGGTGCTCTACAAGAATAAATATTTTTTATATCAGTTTGGCCTAACAACATAAAT
TAAAACTCTAAACCCGAATGAAAAAGGTCCAGCAGTCAAACCAGCGATCTTCGTATCCCG
ATAGTGCAAACCAACACCCGACGAAGATTGTTTCTTATACATAGGCTAATTTGCTCAAAA
CAAAATATACAGAGGATAATTAATCTTATATATTGAGACCGCATTTCTATTCTTTACAAA
ATAAAGTATTTACTTATACATGTGCACATAATTTTTCATGAAGCATAAATATTTTGTTTC
CTATAAGTACATAAACATCTTCCAAAAGCATGATAAATTTATTTATTGCATTAATAGTTT
ATTAAAAATGTTAATTCAAATAATACGAACATTTATTTAAATAATTTTAACCAAGGTAAA
ATATATTTCACTAAATATTCAAAAAAATTAATGTATTTATATAAAGGTCAAATATATTGA
AAACAATAAATCACAATATACCGAGGAACAAGAATACTCATAAAGATAAAGATCGTACCC
GAGGTTTCCCGCAGCATTTTTCTTAAAATATCAAAGTTTGAAAAGTAAATTAATATTTTT
TGAATTATATGAACATTTATTTATATATATTTACATAAGTATTCGTATAATTTTACATAT
TTATGTTTTAATAAAATATTCATGCAGCATATAAACGTTTTCACATTTTGAAAAATGTTT
CTGAACTTTATAGGAAGCAAATTATAAAAAATCATGTGCAACACTTACAAGTCAAACGTT
TTATTGTCTAAGGAATATATATATCCTTTAGCAAACAAATTTTGGAGGCTCTGCTAGTTA
ATCTGAGATCTTTGGGTCGGTGGTTCCCGTTGGGTACCTTTTTCATTTGATGAGTTAAAT
TTTTTAATTTATGGTGTTAGCAAAAGATATGGAATTCACATATACCCTATTTATGCACGC
AATGTCACATTGTCCGTTTTTGTTATATGCGCAGGACATGTTACCGATGGTTTTGGTTAG
ATGCCCCGTGGTTGTTATTTTTTCTCAATACGATTTGTGTTGTTTCTGACATGTGGGCCT
TCGAGTGTTATTTTTTTGCGAAAAAATACAAGTTGATTTTTTTTTACAAAAAAAGCAGAT
CACATGCCCTGTCCAACATCCCATCATTGACAATGGCCCCATGCCATGCTGGCATGCCTC
ATCGGCGCCGTGGACGTATACAAACGAGTTTTGCATCATATTTGTACCGCGAAGCTAAGT
TTTTTTTTGCATCAGTCCAATATACACCGCAACTTGTAGCACTAAAGTGACCAATCACGC
CAAGTTCTAGTATCAATAGTGTAATTGTCTCTTTAAAAAGGTTCCATGTGTCTATTAGGA
ACTGTTTTATGTATTGTTCAATTTTTAATATGAATTTCTTATAGTTCACAGTTCAAATCC
GACCAGGTACTTGCTTATACGTAAAGATCACCAAACATTAGCTTGGGCATAAAAGAAAGT
ACTGGAATGCAATATTTCTGTTTCCGAATTAAGGAGTCTCCCCCAATTCCATATCTCAAA
CTGATAATAGTACAAGATAGTTAAGGCGTACGGTTCCAGGGTGGACTCATTACAAGCATA
ACGACCAATCTTGTGCTGCTCGCCTCATCCAACAACAGAGCACAAAGCTACCAAAAGCAA
ATAACTTCAGTGCTCGTACTTTATTTCTAGTGTGATCGTACGAACATGTATTGTTACAAA
GCTTCATTTCTAGTCTTCCAGATAGCCCACAGTTTTGTATGCTTACTATTACTACCGCTA
CACGTATTAAATCATGAATAAAAAGTAGCCCACAGATTTAGTAGTTACTCCTACCGCTAC
ATGTATCGAAATCATGAAAATAATGCAGAGAAAATTCAGGTTCCTCCCATCATGTCTGTG
TGTAGGAAAGCAAATGCGCACCACTTTGTGGAGAAATTTCTCTAGATTATGCGTGACAAC
GATGGCAGGGACTGTCTTGATACTCGAGTCGCAACGCACTTATATTAGTTATCTGCTTCA
AGGGGGGCTTGCTGTGGAAGCAAGGTTCGAATCTACACTTGTCGTGGCTGCATGATACTC
CAAGAGAATCTACTGAAACCAAGAGAGTAAAATTTGCAGGGTAATTAAATTTGCAGATTC
TGGTACCTCCCCATTTGCAGGCCACAAATAGGATTCCTAATTACGTGTGATGCCGTGGTG
TTGCAATGGTTCTGACGAGTGTTAACTTGTGCTCTGCTCACCCATCTGCTGTTTCTTCCT
GTATTTTACTAACTCTATTCGTCGGTTTAGTAATTTATATCGCTCACCACCTGGCACATC
TCCTTATTAATTGCTGTCAAAGTCACCAACAGCATCACCACATCAGTATCACCTGCCCCA
GCCCCTGGTCAGCACATCGCCGTTGCTCCCATTGGTGGTCGACACAAGTGCATGAAAGTA
TATACTACAGTTCCTAGTGTTAATCTTCCAATTCTACCACGGCCACTCTGTGGACGCCAA
GCGTCTTTATATACCCATGACTCCTCTCCACCCTCACCTCTCACCACTACACTGGTCCTT
GGACTGAAGTGGTCACCTCCTCCTCGGCTCCACCATGCTTCCCAGGATCCAGAGGAGCAT
CTTCCATCTCGGGGAGGAGGGTGGTGATGTCCAAGTCCACCGCGGCGCTGATGATCGCCA
TGGAGATAACATTGTTGACATCCAGCGGCGCCTCGGGGGGCACACCCACGGCCGCCGGCT
GCGGCGAGGAGGACGAGACGCCGCCGACGTCGTTGTCGGGCTGCAGATCCTCGTCCAGCA
CCACCCGCAACCGTGCCACGTCGTCCTGAAGCAGATGGTCAGCTCGCCGCCGGCGCGCCA
CCGCCGTCCGTGCAGCTTCTCGGGAGCCTGCTTCCTTTGCCGGAGGGAGCTCAGTCCCGA
CAAAGACGTGTACATGTACAGGTACTACTGCAGCCTACGTACAAGCTCGTGATCTGGAAA
ATTCAGAGTCGCTGAGGCGACATCGATCCGAAGGCTTCGTGCCTGGCGCATGTCTGATAG
TATTGCTGTGTTTGCAGGGGCGACCAGGGGTTCTGCAGCGAGGAGTGCCGGCAGCGGCAG
ATCTTGGCGGACGAGGCCAGAGAGCACGAGGCCATGGTCAACAAGGAGCGTCGGGGTCTG
GCGCACCGTCGTCACCACCACGGGCCACGCGCGGCACCGCCGGTGGCGATCCGGGGCGAG
CCGACGAGATTACTGGCTGTATCCTAGCTTGATTATGATGCATGCACGAACATGACATCC
ATGAACAGAACGAGCAAGAACCTATGACGCTGGGAAGCTGGTTGCAAGTAATCGAGGTGC
AAATTAAGAAGAACAATATGGATAATTGCGTATACGGCGAGGTGAGGGTGAGAGTGAGAT
GGTATATTATGATAGAGAGACGTTGAAGTAGGGTGCATGTTTTTTCTTCAGGCTGGTAAG
TTCGGATCTGTAGCCACGATGCAACTAATGTAATCTGCTCCTGGCCGCCTGTTAATATGT
GCACATCCGGTTAATTCTAGACGGAAGAAAGTAAGAAAGAATAATTGGTACACCGAAATT
TGGTGGCATGATGCTGCGAAATACTTGTGATCAAGTGTTGAACTCGTGGTGTAATCCTCA
ACACAAGTTAGTCGTACACGTGAATCTCAAGGTGCTAGAATTTGATGCCAAGAGGAAGGC
AAGGGATAAAATGATGCTGTGGCATCTAGCAGCTTGATGGGGAACACAAATGGTACCAGA
CTGGAATCTTCTCTGGAGCTAGAAAACGACTAACAAAATGAGAAGCAGCCATAAGATCGA
AGAGCTGCAAAGAGGGAGCAGCCTAAAAGACAGGGACCGCTTGAATTATAATTTATTTCG
TGGGTGGGCGGACAGAAATTTATTACTCACTCCGTTCCTAAATACGGAGTATAAGACATT
TTAAAGATTTTATTATGAGCTACATACGGATGTATATTATCATATTTTAAAATATATATT
CACTTATTTTACTCTGTATCTAGTCTATAATAAAATTTCTAAAAGA