| Morex x Barke POPSEQ 2013 | Oregon Wolfe POPSEQ 2013 | Morex Genome Release 2012 |
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Predicted Genes from contig_65543
| Gene ID | # CDS Predicted | Max CDS Length | Probes in Cluster | FPKM by Treatment | FPKM by Replicate | Top Rice Hit |
|---|
| MLOC_74303 |
2 |
3682 bp |
MLOC_74303.1 |
Available |
Available |
LOC_Os03g49400.1, FRAME:-2, EVALUE:0.0, 13103.m05346 protein ethylene-insensitive protein, putative, expressed |
| MLOC_74302 |
1 |
653 bp |
None |
Available |
Available |
None |
| MLOC_74301 |
2 |
1144 bp |
MLOC_74301.1 |
Available |
Available |
LOC_Os09g02440.1, FRAME:+1, EVALUE:4e-49, 13109.m00164 protein DCL, chloroplast precursor, putative, expressed |
CDS Structure of MLOC_74303
CDS Structure of MLOC_74302
CDS Structure of MLOC_74301
Contig Sequence (10549 bp)
>contig_65543 10549 assembly3_WGSMorex_rbca.fasta
AGATACGTTGGAGACGTATCACCAGGTCACTCACTAGGCGCGTCTAGGGGCGTTTAGGGG
GTCATATTTGTTATGTCTGGATGTAGATGCTCTAAGATACTCTGAATCTCAAGAGAAAAA
TCCTAGGCCCAGACCATCGATCTGTTGATGCTCTAAGGCCCTTCCCATTGCACCAGTGCT
AAGGGTGTCACATAGGCAAAAAAAGTGATGTGGCAAATCAATTAAAGAGGAGAGAGAGCA
TTATAGTGACTCCAGGAAGAAACGGTGCTAAGCGCATGAACCTATGTAAAATGACTACCA
ATCAATGCATGGAGAAGTTTAATTATTAAAAAATCCATGAGAAAAGTTTAGCAACAAAAG
CTAAGCACATATGTATTGGAGATACTGGTTGCTAAGGGTTTTAATGTACTTAACACCTCA
TCTAAGCACTGATGCATTGGAAGATGTCTAAGAACTTCTCTAACAGACTCTGTATAATAT
CGACCCGCAAAATACATTTACAGTTTGCTGCAGATCAGATTTGCAGGGCGAATTTGTGCG
CTGTAGATCAGACCCCGCATATGAAACTGTAAAATTTGAAAAAAAACATTCACGGAGAAA
CTTGCAATGACATTCATCATACATAGTTGATCATCATATACATCATATATAGTTGTTCAT
CAAACTACATCATAGTACTACACAGGGAGGATCTGTGGGCCGTGCAGCGTACCCGAACCT
AAGCTACCAAAAAAGACGGGTGCAACGATGACGACGCGGCGGAGGAGCCGGATGAGATCA
GTCCTCGTCGGAGTCGAGGTTGATCCACACCTTGGCATGCTCGGCCTTCATGACGCGTAG
GTCCACCTCCTTGGACGCGTGCGCGTGCGACGCCGCGACGCCCTGCTCGAGGAAGATATC
CTCGATCTCAAGCTCGGGGCGGATGCGCGCGTCGGCCTCCTTCGCCTCGCTCACCGAGCG
CTCCATGATGACTCGCTCGAGGTGGTCCTCCTGCCCCGGGGGAAGGTAGTCTCCGGGGCC
GATGACGCCTCGACACGGCGGGTCCGCGTTGGCCTCGAGTTTGACGGCGAGTGGCCCGAG
CTCCTCCGGATCTCTCTTGACCGGAGTGATCCGTGAGCTTGAGGCGCCCGCGGACGAGCT
CCCAGCGACAGAGGAACTAGAGGAGGCGATGCGGCGGACGGCGAGCTCGCGCTCGTACTC
ATCGACCTCGCGACGTTCGAAAGCCGACGGCAGCCAGCTCCCGTAGTTGAGCCACCTCCG
CGCCCCGCACTTGTGTGCGGCGGCGGCGGCACTCCGCGTCATCCCCACCATTTTCATAGC
CGTCCATGAGTCGGGACTGAGTCGTTAGGGGTTTTTTAGGCTCGTCAGCGGCAAGAAATT
GGGGCGGAGTGGGCGAGGAATCGCGGCGGAGGTGGATAGGGTTTGACCCGTATCCGAACG
ATGAAACCGAATAAATAATGATGAAAAGGGTCTTTTCCAAACGACGGTAAAAAAAATAAA
CGGACCCAAAATACGGTGTCTGCTCTAACAAAAGAAAATTGAACCCGTATACTCGTTGGA
ATTATACGGATTCGGCCTTCTACAGGGATGTGCTAGAGATGAATGCCCTGAGTATCGAGA
GAAAAAGCCTAGGCCCATACCACCGTTCTGTTGAAACCCCAAACAGGAAACCCTTTCTCG
CCGTAGCTGAAGAAGCCATGGCGTTGGCCGCCGCCCTCGCCCGAGCGGCCACGCGCATCC
TCCACGGCGGCTTCCCGCTGCACGCCACTTCTGCTGCACTCTACACCCGCAGCCGCCTGT
TCTGCAACCTCCCTGCAGGCAACGAGCCCTCCGCTCCGGGGGGCGAGGAGGAGCCGTGGG
AAGCGGCTGAGGCGGAGATCCTCCTCAAAGTTGGGCCCGTCGTGGAACTTGTCAAAGACA
TCCTCCATTCCAGGAGGTCAGTTGTTCGTTTCTTCTCTCGTTGCAATGAATAGGAGGCTC
AGGTCGCAGGCTCACGGATTTTTCAGTGCTGTGCGCATTTGACTCATAAGATTTTCATGC
CATAATGGTTCGAGAAAAAGAAGAGAACGTTGTAAAAGAATGTGAGCTAGGTAATCAGGA
TTTCCTGGGAAATTGTCAAACTGGATAACATTTTTCTAAAGAGAAATACACATGCATATC
ATTTGCAGCAAGGAGTGCAATGAAGATAACTGTGTGTGAATATTTCCGTAAGATGCAATT
TTCCATTTCCTATATCACTGTGGTTATGTTTCAACAACTAGAATACTAGGAAGCTTCTTG
TTAAACAACTGCAATATGCAGCACCATCAAAGAGCTATATGATGAAAAATGTATTATTGG
ATCATCCAGTTAAATAACTAGAATACTGGAATGACGCTTTGATAGTGTTCAACTCTGTTT
ATTAAGAGTAAATTCTAGTTTTTACCCCTTATTTTGACATTTTGGACACTAATTACTCCA
TTTAGCGAGATTTCATCCGTTTTACCCCATTTAGTAAAACTTCTGCCACAATTTACCCTG
TTTAAAATTTTGTGTGCGTTTAGACCGGCAAATCCCAATTGTTAGGTCCTACTGGCATGC
CACATCGACGGTTTTTTCCTGACTATTTTTCTCCCTGTTGAACCGGTCCTTGCTGCTTCT
GCCGACCGGGACCGGCCCGCTGGAGGTCGCTCGCGTTGTGTCCAATGCACAACATCCTGT
GCAGCTTGTCATTGCCACTGCTACTGTTTGGTGTATTCTGTAGCTTGTGTAGTTGTGAAT
TGGTGAAGCTATCTATATGTGTGATGTTATTCTGTATTGTAAGGTCCTGGTGCTATCTAC
AAATGAGAAGCATTATTCAATCTGTTTTGAACATGTGAATCCAAAGCAATCTGTAGCCTG
TATTAATCAGTTTTGACAGTAGTGTGAGCATAAATGCAGTATGTTTGACAAAAGATAGAT
AATTTGACAACATGATCCATGAATCAGGAGATGAATTGGCATACCCAGGGAACAAATAGG
CAAAATAGTTGTCATAACACAATTTTTTCGCATTGTATTTCCATGATCTGTTGCAAATAA
TAGGAGAATGATTTGTTTTATAAATAATATGAGAATACCATCAACTCCAAAAATATTAAA
CATGGTAAATTGGGACAACGCAGTTGGACCTGCCGGTCGGAATGATCACAAAATATTAAA
CAGGGTAAATTGTGACAACACTTTGCTAAATGGGGTAAAACAGATGAAATCACTTTAAAT
GGGGTAATTAGTGTAAAAAATGTCAAAATAAGGGGTAAAAACCGGAATTTACTCGTTTAT
TAACGAAGGGGATTGGGGTATCCAAGAAGGTTGCTTTGGTTGATTGCATAAGGTGATATG
ACCATATGGCCGGGTTGAGTTGCTTGTTCTATTTTTGTTTGACAATCACATGCCCTGAGA
CAGGGAGCGGTGGCTGTTCATTCAGCGGCGTACAGCTTTGTCCTCCCGTAGATAGATGTG
TGTCTTGTGTGTTGAGTTTGCCTTGTAGCGTGTGTGACGTATGTCCATGAGTTTGGCGTG
TGCCTTGTGTTGTTGGATGTTCATGAGTTTGCCTTGTGGGGTGTGTTTTTTATGTCCATG
TGTTTGCCTTGGGGCATGAATGTTGTAATTCCCAGTTCCGTGTAATGTTTCATCCTATGG
GTATGCTATAACTGTGAAGTCCTTTCGCCCCACCTTGTTTTAATCCAATGCAGGAAATCT
TTCAAAAATGGTGCAGGCTTGCAGCTGATGAAAAGCACACTTACCTAATATGTGTTGTTG
TACTATGAAACTTGCAATTTGCAAGGATAGGCTGTTGTGTGCCTATGATCATATATCTCC
TTTCTGATAGCATTCTGTTATAACAGATATGGAAATGGTGCATTTTTAAATCCGGAGGAT
GAAAAGGTTGTGGTAGAAAAGGTTCTTGCTCACCACCCCCGATCGGAAGACAAGATTGGT
TGTGGACTTCATGCTATTATGGTGAGTTAGCATGATCAGTTCTCTTTACTAAGATAGACA
TGAGACCCTAGAACAAATCTAATTTTTCCTTGCTTTGTTTCTTCATTGTCATGCTTGTAT
TATTAAATATATTTTCTTCAGATATTTATCACGTGCTTGTTGGAATATCTCAAAACCTTA
GTTTGTGCAGTACATTTAATTCCTTAGGAGGACCTCCATGAGCATAAGAATAGAACTTCA
GTCTCGAGTCTCAACCATTCTCCTGTTTATTTGTCTAGAAATCTTATTATTTGACATGAA
TATCTGTTGAGGCTCAATCTTGATAATGTGCAAGTTCACATTGCTCTGAACATGTACTGG
TACCTTGTGAAAGTAATCTTTGCACTGCGAACCTAAGGATACGTAAATTTTGTGGACATC
TCCTAATCTGTGGCATGCTCATCGTGTTTGTAGGTTAACAAGCATCCTGATTTCAAGATG
TCCAGATGCCTGTATGTGGTTAGAACAAATGGCGCTTGGGCGGATTTCTCATACCGCAAG
TGTCTCCGGGCGTACATCAAAGGGGCCTATCCATCCCATGCGGATAAGTTTATACATAAA
CATCATCTAGTTCAGAGGCGGTCACATCTTGGTCTACTTCCTCCAAAGTAGAAACTACCT
GTATAATGTTGACATTGGCAGGTGGCTGGCACCAAGAATCTGTTTTGGTCCTTCTGCTTA
CTATCCATCCTCATGGTGCATTTGCGTGTAGAGCTGGTCGCACCGTCTCTTTAGCCTATG
TTTGGTATGTAAGTGAATGAGGTCATTGTCCAGGCTTTCTTTGAAAGCAATGTGCAATAT
CCACTTTGTTGCTAAATTACCTGGAACTAAATTCTTAGACGGCTATATTCACGTGTATGT
GTTGCTCGTATCAATATTTCATGGGTTAACTGTTAAAAGCGGATCTTGACTCGAGATTTG
GACAGTTCATATTACTGCCAAATTTCAAGCTCTGGCCGTCAGCCTACCAATCAAAGGAAG
AAGATAGTCAATATAATTTTTGATGTACTTTTTTTCTTTTTTGATGGTTTTGTGTCTTGT
TATCTTCCAGTTGTACTGTCTATTTTCCTTGATAATATTCAGTCAGTTATAAGATGCCTT
TGGCCGTCTTTCTGTTTGTAACTGACCTGGGGCAATTTTCCTCAAAGGAAAAAAAAATCG
CTCCATGCTGGATCACAACAGGGTCATGTTCCGTTCACCGTTATAAAATATTCACTCCCT
CAGTTTTTAAATATAATGCTTTTTAAATATCTCAATACGGACTATATTCAAATGTAGACA
TATTTTAGAATGTAGATTCATTCATTTTGCTCCTTATATGTAGTCATGTTTTAGTATGTT
TTATTAGGGAGTAATTATTTGGCTGCAATGGTCCGGAACATGAAATGTTGTTCAAAACCT
CATGTAAGTTTTAAGCATCATCACAGCACTCGCCCTGAACCTTACACATATGAACCCAAA
CACCCCAATATAAATTAAGACATGAACAGAATATCATGTTTTAGGTCAAGAAAACTCGTC
ACCAAACAACAACCGAACGACATATAGCACAAGGCGGTCACTGCATTGCATCTCATTCAT
GCCCACAAGCACCAGATTAACCATGCACATGTCAAAAGAACATCCCATTAACATTACTTT
TAATCTCTACAAAGTCGCATGGGGCACAGGCACAGAAGGCCCAAAAAACAGTCAGGTTGA
GCTGCAGTGGACTTTACACCACTGATTCAGCACATGGCACTTTCTCTTACACGCCGCGCT
TGGCAGCAAACATGGTTTACCCTGCATAATCCTTGGGCCCTGTCAAGCATCACATGCAAA
AACCAAAGGGCCCAAAAAGGTCAAGGAGCTCCCAGGCACCCCCTTAGAAACGTCGCAACG
AAAAAACCACTAGGGCTTGAGAAGCAGGAAAGGGCGACCTGCCACTAGGACAGCGCCAGA
AACCCTACAAAACAAGCAAAAAGATGCCACTATTGCCCAACAGAGGGCTTGCTCGACAGC
CTACGCTTGTACCGCTTGAGAACTGAAGCCAGGTTTTCCTTCCCTTTAGGAAAAGCTACG
TCTCCTGCTGCTGTTCCGCTTCGACCCTTGCGTCCTGAGATGGCTATTTCCACGTCTCTG
ATCGTCTCCAGGATCTCAGCTGAAGTAGTGAAGGTACCAGAAATGGGCCTGGCAACCGGG
CCTGCTATCTGAAGGCATGCACACCCAGTGAGAGGTTTCCGGGGCATGGAAAAGGCGGGT
TCAATGATTCCCTGCATAAGGTACATATATAACATTAGCAAAAACTGCAAGGAAATGAAC
CCAGTAAGAGTAGGCGTTTTGCCTCTGCATTCTCACAACAGCACACTCTAACAGACCAAT
ACAAATGAGCATGCAAAGCCTATTCATGTTTGTCTTTTGCTCAAAGAGAACGAAGGGGGG
GGAGAGGCCTAGTTGAGAATTAAGATACGTCTGTTTCACTTGTGGATTATATACAACTAT
AAGTTAGACTCCAATCTATGCAAATGCCATATATAGTACCGGGTCACTTCATTTGCATCA
TGAAATACTCCCGACAGCATAGCAAATTGATATGTACCCAACTTGCTATGCTCAAATAAA
TATGCATTTAAAGTAACTTAATGCAAGGTGAGGTTAATTTTCAGAACTAATGCAGTCAGG
ATGCTTATAACCTTCGCTAGATGGATGAGTTACCAATACCTGGATCCTTCTTTCAGGGGG
TAGCCACATTTTAATGGTAAAAGTACAAAAGACAAAAGAATCACCTGAAGACGGTTCAGA
ACATATGTGTACTTCCCCCAAAGTTCTGGTCTACTTTCCACAAGGGAAAGGTCCAGTACC
CGGCAGATACACCAGACACCAAAACTAACAATCAGGGTAGCCTGCCAAACACAGGTTTCA
CCACAGTTGGGTAGACCGCGCATGCGCTCAGTTGTTTCTTGTGAAAGTCTCTCAGCTGCT
GCAACTTGATGAATTAAATTTTCATCACAACCACCATTATGCCTAAAGAGCCCTCCTGAT
CCTTCCAGTTTCAAGATATTCATTATGCAAAGCCTAAGTGATTGAAGAAGCTCTGCCTCA
CACCCAGTGTAAGAGTAATCATCCTTTGTCATGCCACTTGATCTCTGGCCAGTGTTCACC
TCACTCTTATTCAGTTCTGCACTTGACATACCAAACAGCTGTTCAAACGGTTGTTGGGCC
CAAAGGGATTTATTGTTGGGGTTCATACCCAACTGCATAGAAAGGACATCTCTTTGGAGA
TTATGCTGTGACCGCTCATTAAATGCAATTTGAGCTTTGGACCTGGCTGCCGAGTCCACA
TATTGCGATCTCTCAGATGCCAGCTTACTTAGGTATGATTGATTTCCGGCAGCGCCACCT
AAATTTGGTTCGTTCAACAAAGCCCTTCTGTTTGCAGCAATTAGTGCAGATATGTCAGGT
GAACTGTGATACTTCTTTGAGTATCCAGGTGAGCCAACACTTTCACTTTCATCAACAGAG
GTAGAATCATAATAAGGTCTCTCGACCGTTGCATTGAAGCGATTCATTGCTGGGCTTTGT
GGAGAGTTAGGTCCCAGTGAACCCCGTAAATTTTGGTTGCGGGCATGCATAACAGGATCA
GCATAGTTAGAAAAAGAATATTCAGACGACCTAGGAACCCGTCTTGGGTCCAGGGGGATG
TTAGAGTGCTGATTTCTACTTGCATTCATCCCTTTCAAAATAGATGCCAGCTGATATCCA
TGAATAGTAGCAGGCTGATAGAACTGATTATCAGAGTAAGATGGCATGTTGAAATTTGAA
TAGTATTTTGCATTTTGCTCAAGTAAGCTGCTGCTTGAACTCGAAATGTCTGTATATGGT
GAATTCATGCTCTGGGACCAGTTGGATGAACCCATTGGACCCATCTGATGCCCAGAACTC
CAGTCTAGACTACGGATATCCTTATCACGGGACATCGAGTCCCACGAGTTCAGTGAGGTA
GCTGATGCTCGCAGCGCGTCTCTCATCAAGGGGCTCTTTGAAGCTTCAATGGTTTTGTTA
TCAGCCCTCACAGCAGAATTAGCTGCTCCCAAGTCCAATCCAAGCAAAAAGTTATACCTT
TTTTCATTAGCATCTTGTGTAAGCTTACCATGATAATCAAAAAGATGCCCCCAGAACTCG
TCAAGAAGTGCTGCTAACTGCTTCCTTGCAGCACGGCCCAAACCAGACTGTGTCGAGAGG
CTGCCACTGCCAACATCGGAGCCTTTTCCCCTGCTGAAAGTAAGAGATGGTGGACCATCC
GGATAGGAAGGTGCTCTGCCTCCAGCAGACTTCTCATGTTCCAAATTATGCGAGGCAACA
CTATCCTTGTCCGTGCAAACTTCTGCTACTACTTCAACATCTTTTTCAGTTGCGCTCTTC
CCTTTGATGTTCTCTGAATGAATATGTTCTACTTCAATGGCTGTCGAAACCTTTGGTACC
GACTCTGTCCAGTCAGCCGCACAAACTGGTTCTGGCTCTTCATGGTAGACAGGTGGTGAG
GGTTGAGCTTTAGGAGTACTCGCTGTATAAGCAGTTGATTGTTGACTGTCAGGATCAGAC
TCTACAGTGGTGTCAGAACTTTCAGTATGTTCCAAAGCTGATTTCTGATGACTTTCCATT
GGATCCCTGAGAATAGCATCAGTAGAAGACCTTTGAACTTCTTCATGGGTAACATCTTCC
AGAGAAACATCTTCTGTATGGTGAGTACTGCACAATGGTTCTCTCTGAGAGTGCATAGAG
AACTCCGGAGTTTCAGCTTCATTACTTGCAGACTTCAGTGGAGTAACAGCCAGGAACAGT
GTAAACAGAAGACATGAACATGAAATTAGGACTATAAGAGTATATGGAAGTACAACAGGG
CTCCCGGTGTTCCCTTTCATGCTGTTTGTCCAGGTGCTATCACCAAACAGGATTTCTGCC
TTGAAAATGATATTCGTAAATAGCATGAGAAGAAACGCGAGAAAGGCCAATATTTCAACA
GATGAAGATATTCTGTGGTTGCCCATTATTGATCTTGACGAAGCAACACGGAAAACAGGT
ATAACAGACGCAGGAAGGAGCATAGCCTGGATAACTGGACAGATGATAATCAACTGATAT
ATCGCTTCTGAACCCGCAACCTTTGCATAGTAGATTGTAGGAATCATGGCAAAAAGCTTG
AGTAGCAGATGATGCGCCGAAAGAGAAAGGTTTATACCAAAGAAATTCTCTACAATTGCA
TGGCTACCAATAATAGATGACAGTGAGATGATGTGGCTCGAAAGGAGAAGAACCATTAAG
AAAACAAGCGGCGCTGCAGGATTCATGAATATCTGCAGAAGACAAAGATTCAGAGAAACT
CAGAATATAACTTAATGCGTGACTGAAATCCAAAGGCAATGTCGCAAATAGTTGAATACA
TAAGATAGGGGAGACATGTCAAATACAAAAGTTAAAAGGTAAGTAGGAACTACAGAAAGG
AAGACACAGACCTGGTTCATTAGCTCTACAACATCTTGAAAGGTCAGGAGCAGTGTATCA
CCGGATCCAACTGCTGCTGAGCTTATAAGAACATAGTTCACGAGAAAAACCCCAGAAAAA
ATAAATAAGATCGAAACAAGGTGGTCATGAAATAAGGCCCCGAGTGTAACAGGGGATCTT
CTTTGAGCCTGCACACATGATATTCAAATTAACATAAACAAAGTAAAGCGAGTACAGTAT
GCAGAGAGCAAATTAAGCAAGATAAACTTGTTTATCGAATCAACAAATGAAATGTACTCC
CTCTGTCCCAAAATANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNATTTTGAGACGGAGGGAGTACTTGATGTGTTATATAATTGTTTGTAAAC
ACCAAAAACATGATGTAAGTTCCCAAACCTCATAAGTCAAAGCCGTAACCATACAAAGGG
ACAGGCTGCAGAATGCTGGTGTTTTAGCAATCATTTTGTTTACTGAGAAACTGATTTTCC
ATAAATCAAGAATCTTTGCAGTCGAGTTTTTCATCACATTTCATGTAAGGTAGCAAGAAC
ATATTTGTTTTTTTTCTTTTGTGAGAAAGCAAGAACATAAATTATATATTTTCTATCATG
CACTCACACAATCGCACACAATTCTTTTAGGGGTTAACAAACCACACCAGTATCATACCA
CAAAAGTCATCACTGATAATAAGGACTCGGGATCTAAACTTATATGGCTAAGTGGAGTGT
TTACAGACTAAGATTGATCTTATGATTCGTATCTAACAAAATGCAACATGGATATACTGC
TTAGTTAAGACTGTATGATAACTCTGCTGAAAGGGAGGGGAAGTGTGCTATTCGCAAGCA
TATGCCTACACATTGCGCGGATACTTCAGAAAGCACGTGTATCTAATCGGATACTGCCCC
GACACAGCCCGATAAGTATCCCGTACGTATCACTGGATTTTTTATTAAAATATACTCCCT
CCGTCCCAAAATTCTTGTCTTAACTTTGTTTAGAAATGGATGTATCTAA
