Map Locations of contig_65481 (4612 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location No map location




Predicted Genes from contig_65481

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_74269 1 2635 bp AK358543 Available Available None





CDS Structure of MLOC_74269






Contig Sequence (4612 bp)

>contig_65481 4612 assembly3_WGSMorex_rbca.fasta
TGCGACGTTCCCCAACATAACCATGGACGATCACTAGCGGAGGCTAAGGATCGAAGAAGA
TCCCAGGTTCTGCCTCTTTCACTAACTCTGGCTTCCCCATAGACGACCGTCATTCTCCAC
TCGGGTGCACCCGGCATAGTAACCAAAGCATCAATGTGATAATCAGAGTAGGCAAAGGTT
TGAAACTTTATTGCATTATTCCAAAAGATGCCAATTCCACCACTCCTTCCAGAACTACTA
ACCGCATATGCAAAATCATAACCTAGTGTACTTGCTAAGCTTTCTACTCGAACTCGAGGA
AGTTGACTTTCCACAATGCACAACACTAGCGGAGCATATTGCCTCGCTAAACCGCGAAGC
TCGCGAACTGTCTAGGGTCTGTCAGCCCCGCGACAGTTCCAGCAGAGTATACTCATTGAG
CCCGGCGGTGCTCCTCGCAGGAGCCCGCCAACTCGCTCTGTTAGTTCGTCATTTTTTAGG
GTGACATTCCCTTCTTCAGCTTCTTCATGTCCCGTGGTGAGACGTATGCATATGGAGGCG
GCGGAACTTGCCCCGACACCGAAGTATCCTGTGGTATAGTGGCTTGGTTCTGATCGCTTC
CCCTGCTCCGACCGGCTCCTTCCCCGGAGGTGTAACATCAGAAAGGTCAAGCCTTTTCTT
TGCCAACGACTCAGCAGGAGCTGGTTGTTCTTTACCCTTGTCCTCCTGCTCAATCGGATC
TGTTTTCATGGGGCTATCGGCTGTGTCATCAAGGTTATCATTGTCACTCATCCCCGCCTC
TTGTGAAGAGTGTTTCCTGGCTCCATTAGCAGCTCCATTAGTTGTTCTAGATCCATGTGC
TCCCCCTCCTCTCCCACGGCGTGCACCTCTGTTGCCTGGAGGGTTGGAGTAGTTGTTCTG
GCTAAACTGATTCGATGGGAGGCTTCTTCCGGTAGCTACCATCCACTTCCCGTACTCAAC
CTCGTCAAGGCCATGGATGCCATTGCCACACTCTTCGAGTATGTGCCCCATTATGCCACA
CACCTCACAAAAGAACGCAATCTTCTCATTTTGTTGCAGATGTACCAGCCTTTTGTATCC
TCACCCTAATCATGCATTTTTGTTGCAGATGTTCGTGAGGTATGGCCACAAACCATACGG
CCCAGAGACCCCGCACCCGCACCCCCATGGCCCACCTCAAGGCAGTTTGCATCACTGGAT
TCTTCGGTCACAAAGACCAGCTGGAGCTGGCACTATATTATATGTCCTCGCCAACTCCCC
CGCGCTCGAATCCATGGAGGTTGACCCAACAGTGGTGCTACTCGATCCAACAGACCAAGC
GTTGTACCTTCCAGAGGACAACGTGTTTCAGGACGGCTATAAGATTGCCACAATGTTTCT
CTGTGAGGCCGACCATCGCCATGTTGTGGAGGTCGTCTCCATTTGTCCTTGTACCAACAT
TCTCATGTCTTTGCATAAACGCATCTTGTTGTCTCATCGGCTCTTAAGATCGGGATGAGT
TGAATAAGTGTTTAATTCGGCTGTTACGTTGCATCATATTTTGTTGTAACTGCTATTTAT
ATTTCTCTTCTGGATTTGTGCTGGAAATATAACTGTTTCGTGCTAATTTTTTGCACTTCT
GGCCGATTTTATTGTTTATCTGTTAGTGGTATGATGAATGAGTTCACTATTACGATCTGT
GCGTACTCTATGGGATAGTCACTAGCGTCGGATTACCATTATGGCAAGTCTGATGTAACC
TACTCCCTCTGTACCATAATATTTGTTGTTGGAAAGAACTAATCTAGTTCTCCTCAACAA
GTATTTAGGAACAGACGGAGTATAATGCTTAGCTGTGCAAAATAGACTTTTATGGCAGAG
GTGAAGGATGGCTTTGGCTGCCGGGAGCTGGGGTTGTGTGGCAATGTGCTGACGTGTCAG
CAGATGTTAATTGGTTGCCTTCATTTCATCAAGTTCTATATGGTGATGTTTGGTTACATG
CGTTTGTGCTTCAGGGATAAGCAAATATAAAAGCACAGCTGTTTGGCTACATGCAACTAG
TTATTCTGCTCACCCCTTTCAAATATGATGGCCTTACCACCTCTTTTGCGGCAATGCAAA
CGATCAGATCACACAAGAAGAACACTATGCGAATACAATCCACGGAACAACTTTGCAAAA
AGGATGGTTGTGCCAAAAGCACCGTACACCATAATACCATACACGAGTCCAATTGGGATA
GAAGTAGTTCTAAATTTTCTGCTTAATCAAGTAAAAAAGCTTGTCACATGCACTGCCTGT
TCTGTCCTGCCAAAGCAGCAGCCTAACAATCACAGGGCCCTCCACTTGTAATCAAAGCCA
TACAGATAATATGAAGACAAATGCAGCTAGCGGTAGAACACGAAACATCTATGGCTCGAC
GGTAGTCACTTGCTGCCATTCGCCATCCACAGCTTCTTTCCACAGGGTCACGTTGTTGTT
GCCATCAGAGACCGCCAGTATGTTTCCTGTCAGCGACCACGACACCCTCCAAACAGGGGT
TCTGAAATCGTTCAGAACTCTTCCTTCCCATTGCTCACCTTCTTTCGGCGCGGTCCAGAT
GACAACAGTTCCGTCCTGGGAGGCGCTGGCGATTGTGGACTTTGGGAGGCCTAGGTTTGG
AGCCCAGGCGACATCTCTCACCCAGTCCCTGTGCATCTGAAGGGCTGGGAAACAGTCCAT
CCTCCAACTCCCGTTGGTGAGCTTCCACACCTTGACTGTGTTGTCACAACCACCAGAAGC
AAGTTTCTGAACATACTCAAACTGCCCCGAAGGCCCTGGGCTGATTAGGGCACCCGGGGC
CATCGCCGGAGCCCATGAGACAGAGGTCACACCCACTGGATGAGCCTGATCGATGCGCGT
CGTCTCCCATCCTCCATCAGAACGAACTGTGAAGACTGAAATGTTCCCATCAGATGAACC
ACAAGCCAAGCAGAGGCCAAGTTCATGAGGCGCCCAAGCAATGGAATTTACAGAGGACTT
GTGCTCAACGAACGTGTGAGCCTGTGCCCACTCATCAGGTTTACCCCCTTCTTTCCATAT
TATAACCCGCCCATCATAGCTGCAGGATGCAAGCATGGAACCATACTTAGGATGAGCCCA
AGCGACTTGCCAAACTGGGCCCTGGTGTCCGCTCAAAGTAGCAAGTTGCTGCTGCGAGGT
GCCACTTATGCCAATGATCTTTATTGTGTTATCAGAGGATGCAGTTGCGAGGCGCTTCCC
ATAGTAATCCATTGCGATGTCATGCACCACATCTTGGTGACCAGTCTCTATCTTATGAGG
AGGCATAGTTCCAATCACGTAATGTCAGCTTTAAAGTGTTAACCAACTCTTCTACGTCAA
CCACCTCAAGCTCCTATCTGTTTTGAGTAATAGGAACCTAACATTTAGAGAACATCAAGT
TAAAGAATGAAGCAGAGTAAAATCTAAGCAGTGTATCATTAATTGGAACAAGTAACATCG
GTGCATTTGTACAACATAAGGAGCTGGGTCTGTTTCATTTTACAGTTACATGTTATAACT
TGAAATAATCTTGATGTTACAGTTATAAGTCCAACAATTTTGACACACAAGATCAACACA
CTAATTTGCTACCAGCATGTCAATACAACATTGTTTACAAAATGAATCATTTGACTCCTT
ATAAGACTGATAATTGTGACTATCTGACTAATGCTCACATATCATCTACACAAAATTAGG
CTAATAAACAAGGAATTCTGGAAACAATATTACCAATATAGTACTCACAACCAAGAAAAA
GAGGTTTAGACACCCTCAGCAGATAGAGATATGCTAAACTTAGCTCACATCTCTTGCAGT
ATACATGCATGGCATGAAATGGTATTACTATAAAACAATGGCCAGCTAGTTGAGTAATAG
ATTTTGTTCACTTGAACATCTTATGACAAAGGAGGAGGGAGCAGTAAGACGGTGGCACTA
GAACTATAACATCAGTCACAGTAATTAAGAATTAAGAAGACAGTATCCTCAATTCCACGA
CCTTTTAGTCGTAAGAACTTCATGTGCTAATTGTATAATCAGGTGCTGCATAACATAAGG
TGTCCACATACCATAACATAAAGAGTAGAACAAATAAATCTCACACATACAGACGCACAT
AGATCTTTTTTTAATCCATAGAGAAAAGAAAGTCACCCAATACCATATATTTCAGCCCAT
CTCCCCTCACCCAATCAAAGAAAATAAATCTCCCCTCGCAACAAAAAAAAATCTCCTCTT
CTATCCCTCGTAGATCAAATCTACACAGGATGAATAAAAGCAAGCATGAAAAAATGCATC
ACGCTTTCTGCAGCTTAAGAATCATCGACACGTGAAAGATTGATCTATGAAAACGCATTG
GAGTGAGGGTTCAAAATCAATAGAGAAAATCAAGATTGAGGGGGAACACACAGCCACAAA
ATAAAATGAACAAAATGTGCAAATTTAGAGCTTGTTTGGGACTGCTCTGCTCCTTAAAAT
TCAACTCTGCTCCAGAAAACACAAGCCAAACGGGGTAGCTCCACGATATGCTGCTCCACA
AAAAAACTAGAATCTGGGGTACAACTTCAAAGTTTTTATGAAGCTCCTAAGA