Map Locations of contig_65458 (5588 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location No map location




Predicted Genes from contig_65458

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_74260 2 444 bp AK251253.1 Available Available None





CDS Structure of MLOC_74260






Contig Sequence (5588 bp)

>contig_65458 5588 assembly3_WGSMorex_rbca.fasta
ACCGCATCTTGGTCGTTACACTACCCCTAGTAGTTGACCCCATCAGTAGCCCCCAAATCG
GTTGTGGTTTAATTGGTCGAGTGGAAGACACTTCAGGGTGTCTCCAGCGTTTCGGAGGAG
TCCGAAAAGTAGCTCGGGCTTCCTCACTTGGTTACAAAATAAAGTTGCAATAGATTCAAG
AGTGAAGATTTCCGAATGATCGGACTAGCTTGAAAGCTATGAACCACCCGATAGCACTCG
ACCATCTCTCAGGAGATACGTCCTAATGACTCGGGTGTACGTGAGTTAAGGGCTCCGAGT
GATCGGACAAGAGCCAGGACTGGTCCTTGTCGCATCCTAGAGGAACTCTTTTGATCACGT
TTGTATATGTCCGAGTGAACCGGATCCCGTGGGAGGGGTAATTCGGCGGACCGAAACTCG
TTGCTTTTGGTAAGTGGACGCAGGATTCACTAAGGCCAAAACATCGCAAAATTATCGTGG
ATTTGAAACGTGGGCGACGAGCGCTTGTAAGCGACGCGTCGCGGTTAGTGGGGAAAGTGG
CGCGACGCCTTGATTACCGTGCTGGAATTTTCTTCACGTGCCTCACGGGTGTTGTTCGCG
GGATCTCCCTCCGTTCGCTGATTGACAGTTACGTATGCGCCTGTCTGGGCTATAAGAAGA
GTGTGCGGAGAGAGAGAGAGTCTCAGATCTGTTTCTTCTTCCCTCATCCCCTTCGCCACT
CTGGACAATTGCCCCGTTGCTCTACCTCTCACCACCTCTCACTCCAGCCGGGCCTGGCTG
TGAAAGAAGACGAGGAGCGCGCCTGTGAAGGCCGAGCGGGCTAAGAAGGGCTCGCACGGG
TCCTCGTCGAGTGTCGGGGCACCAACGGGACAGACCCACGGCGGTTGGATATCATCGCGT
GTCAGGAAGAGCCGCCTATTGGAGCTAGAGAGCCAAGGGGTCATGGCCGCCGGGAGCTGA
CAACTGCTAGAGGAGGGCAAGCTCGAGCTCTCGCTGCAGGGGGACAAGCGGGTCCTCCTC
GTGACCCATGTCGAGCGAGGTTTTTATGTGCCTCCGCACCCTTTTCCATGCTTTCCTCGA
CTTTTATGGGGCGCAACTCCATCACCTTACTTCCAATGCCATTTCCTATTTGGCCTCCTT
CGTTTTCCTTTCCGAAAACTTCCTCGGTTGTCCTCCCCATTGGGGGTTGTTCAAACATCT
AACCGTGAAGAAGTCCTCTCGGGTAGGGGTGAAGACAAACATAGTCCAGCTGTGCGGGGG
TTTAAGTATCCAACTTAGGGGGAAGGGTAGCTTTCCACAAATGTCATTCCTTGACTCGAT
GAAGGGCTAGCAAGACTCTTGGTTCTACTTCCAGGATGTCCCAGTCGGCGATGGTCAGTC
GGGCCTCCCACCGTACTAGACGGAGCGAGTGCAGTCGGCGCCTTCCCTTACCGTGTTCAA
GGAGGAGAGGACGGATGTAGATATCTTGGTGATCGCATTGTTTGCTCTGGTATGGAAAGG
CATCAACGCGATGGACCTGCTTGAGGTCTTCTTCCAGAGAAGGATTCAGCCCCTGCAGAC
CAGGGCCCATCATATGTGGATGTATGAAGGGCCGAGTGACTCCATGTGAACTCAGCTGGA
GGAGCTCGAGACGAAGGCGCTGGAGGCGAAACTCATGGCCATCACTCCGGCATGTGACAA
ACCTAGGGGGACCAGAATGGTGCCCCCTTTCTATGTGGAGAACCTATCGATTGAGGTAAT
CTGAAATTCGGTTCGTTTTGAATGATTTCGTTGTTGTTACTTATCTATTTTTTCTGACTT
GAACGTGTTCTTCTCACTTAGAGAGTTTCACGACAATGATCGGTATGGTGTTGGTCGTCG
ATCATGCGCTCCTCGATATGGCGAGTGATACCGAGCACCAAGATGGCTTGGGAGGCGAGG
ACGACGATGACGGGGAGTCCGAGGAAGGCAAGATGACTCGGAGGAGGGAGATGAGGCGGA
GTCCTCCCAATTTGAGGATGTCCTAGTAGAAACCTTCTCCAAGGTGCACCAAGACCCGAG
GGCCCATGCTGGCGGTGCAAGGCTCCGAGTGCTACAACGTCACCTAAGAGGGCGGTCAAG
CAACCCAAGATTCAAACTATCAAGCCTCACAAGGCGGTTCTACCGCGAATTAAAGTGAGT
GTGCGTGTGGCCTCAATGTAAGCGCCTTTGTCGCGTGACACTTCCATTTCGAATGACATT
TTTGACGGTTGACCGAGTGATATGATTTTCTGAATTAATTTGTTGCAGTGCTAATACCTC
GGCCGCTTCACTCAATCATAAGGCCCTAGAGAAGGGCCAGACCGAGGATGACGTTACGTC
TTCAAAAGGTAATATTTGAGATTTCTTGGATTTCATTCGATTGTCATGTTTTCTCCCGCC
GCTAACGTTCGAGTGATCTTCCATGCTTGTAGGGCCACGTGAGGTGATTGAACTTGACAA
GGACGACAAGGTCGACCCGACGAACCCTTCAGTCGACGCAGCTGTCATGATGCAGGATGT
TTCTCTTACTCGAGTGATGAGCACTTCTCCCGCCAAGGCCTCGACCCAATTCAGGGTACA
ACTCCAAAAGCCGGAGCCGCACTCGGAGCCAGCTCGTCTGCTCCTTCATCGACTCCTCAA
GTGGCCAACATCTTCATGCTGCACCATGTCCTGTAGGACCAGGTGTGCGCGAGCAAGGAG
GCCTTGATCCAGCTGGAGCTAATGAATGGCCGTCTGAAGGGGATGTATGACACCAACGAG
GCTGTGAAGAAGAATGTGCGAGTAAGTACTCTCGTAAGTGCCAGTCTCAGTCGGGAGTTT
TTGTCTGCACATGATTTTTTGTTTTGTTTCCCGAGTGGGTTACACGGGGCACACCCACTG
GGTGTTCTTCTGTTCTAGTGGGGGCACGCTGAGTGCACCCACTAATTTTAGTCATTGAGA
CTGTCGTCGGTTAAAGCGGTCGAGGGGAGCCTTAGTTTCTTTACTGACTTGATGTAGACC
ATTGGGGGTGTAGAACCCGTTGCTTAGCTTGTGAAAGTAACCAGAGTGGTACTTATCGAA
GAGGATGCGGTGATGGTCCATAGACCAGAGCTTCTTGACGTTGATCGTCGGGGTATAGAA
CGTGTTGCTTAACTTGTGGAAGCATCCGACCACCTATCCTTCCAGTGGGGGCGCGTTGAG
CACACCCACTAGGTGTAGTTCCCGAGACTGTCGTCGACTATTTCAGTCGGCGGGACACTT
AGAGTTTTCTTTCTTTGAAGTTTGACTAATATCGTTCCCACGTCTCTGTTTCCTGTTGGT
AGAGTGTTTGCAAGCTCGAGACTCACTACAATGCCATGGAAAAAGACATGCATGGCCTGC
ATATCAGTCCGAAGGTTGAGAAGGCTAAGAACATGTGCGTGGAGCAGGAGAAACGCTCAC
TCGGAGGTAAGCGCATTCCGTCCAGCTGCCTTAGTTCTTGTTTTTTTCTCCCTATCCGAC
TGTAATCACTTCATCATATGTTCATAGCGAAAATCTTCAACTTGTTAAGAGGCTCATGGC
TTATATTTCTTTATACACCACGAAGGAGGCCCTCGAGAAGAAGGACATGGAGCTGGCGTC
CGCTTGGAAGGAGGCTAGTTCGAAGACCAAGGTGGCCAAGGACAAGCTGAAGTCATTCAA
GAAGCTGGGGAAGAAGAAGAAAACTCTGGAGGTTGCTGCGAAGAAGTCCGCGGAGGAGTT
TGTCGAGCTGAAGAAGCACTATGCTGAGTGGGAATCCACGTTTAAGCAAGTCTCTTCCAA
GAAGCTCGAGTTGGAGCGATATATCGAGGAGTTCGGCGATGAGACGAGTGGCAAGTTGGA
AGGTAGGCGAGTCGACCCGAGTGATTCTTGCACTGCTTCGATATCTTGCTCGCCTCCGAT
TCCTTTTGATTTTTCGTGTCCAGAATTATGTGTTGACTTAGAGTCCGAGTCTAAGAGAAT
CGAGAAGGAGCTAGACCCGTGCCATGAGAAATCACAATCTAAAAAAGTGTTGCACATGGA
CAGTGATGTGATGCCATCGACGCAAAATCGACCAACCACAAATCATCTTCCATAAAAAGA
GTGCCCTTGGATGTTAAAACAAGCAACCATTGTCATATTTTTCATGCAACTGCCCCGAAT
ATCCAAGCAAATCCAAAAAACTCCATGACCCCTCACATCTTGCAACTAGATGAAATCATT
GAGACAACTTACCGTCTCATCACTATACAACTGCCCTCAAATATACATAGCAAATCCCCA
AAACTCTCATGACCCTCCCATCTCGCAATTGGAGGGGAACATTGAGGCAACTACCGTCCT
AATGCTATGCATCTATCGCGGAAGATCGAAGCAAATCCACAAAACCCAAAACACCGAGAA
AAAAAATCACGCCGCAGATTTGTTCACATGCACCACCACAACCTCACCCCTCCCCCTCCA
CCCCTTCAATTAAGGCAACTCCCCCAACCCTAACTACCCCCACCACATGTCGTCCCTCGT
GGACGTCATGGACATCCATCGTGACTGCTAGTACTTGCACGCGACGATGACATCATATTC
GCCCCACTTCGTGTAAACCCTAGCCTCGCCATGGCAACAAAATCTGAAGGCGGGACCATG
CGAGGAGATACTGGGATTACCTCAACCTCTAGCTGATGATACGCCGTGCACGCGGACGGC
CTCCCGCATCGATGAATCCACGGTCGCAGCACCGCGCAGACCGCGTGTAGAGACATGGAA
GAAGAGAACGAGCGAGTAGTTCAAAAAATGGGTGGAGAACCGTCGTTCGAACAAGACATG
CGGGAACGGGTTCATGTCTTCGTGCTTGCATTATTTCTGAATTTATTTCAGGATTTCCGG
CGACAAGCTTTCAGTGGGAGGAGACGTTTCCGTCGACGACGAGACGCCTACGATGACTTC
GTAAAATCTCAAGATGATATGCCGATCCAGTCTCTCAAAGGTGTTAAGAAGGGTAGGATG
TGCGTATGTGCGTTCATAGGAGTGAGTGTATGCATGTATGTGAACGTTTGCGTCTGTACT
GTATTAAAAAAAAAAGACATGCGGGGATGGAGCGGTTTCTCCTGAAATTAATGTGGGGCC
ACCACTACACCGCGCCCCCCGGCTCTTCTCTATCGCCACCTCGGACGGTCCGTCGCTTCC
GCTGGCAGCAGTCAAATCGTGCAGGTGCGTTTTTAAGCATTTGGGAAGAAAAAAAAAAGA
GAAAAGAAAGGGAAACCACACACTCGGACACGTGTACGCTCGCGCGAGTCCATCGATCCC
GGAACCGTGTTCATCCCCCTCCGGTGCAGAGGCGGCGGCGCGCGAGGTGGGAAAGATGTC
GAGGGCCGTCAGGATCCGCGGCGACGAGGTGGGAAAGACGTCGAGGGCCAGGAGGATCCG
CGGCGACGAGCTGGAAACGGAGCGGGGAGCAAGGGCGAAGAAGCGAAGCCTGGCAGAGGT
TCACTCCACGAGCCCTAGATCTCCCGGGCAGCTAGCTGTTCGGAGTTCCCATTCCCACCC
AGAGATACTGTTCGCGATCTTCGAGCCCGACGAAGCCCAATCCGGAGGTGATTTTGCCCC
CCCCCCCC