Contig Data
morexGenes
Links



Map Locations of contig_65451 (4336 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_65451

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_74258 1 1229 bp None Available Available None
MLOC_74259 1 1143 bp MLOC_74259.1 Available Available LOC_Os01g64930.1, FRAME:-2, EVALUE:2e-52, 13101.m07005 protein expressed protein





CDS Structure of MLOC_74258






CDS Structure of MLOC_74259






Contig Sequence (4336 bp)

>contig_65451 4336 assembly3_WGSMorex_rbca.fasta
GTCTTTTAAGCGATTTCATTAAGGGACTACATACAAAGCAAAATGAATGAATCTATCCTC
TAAAGTATGTCTATATACATNCGTATGTAGTCCTCTAGTGGAATCTTTACAAAGACTTAT
ATTATGGAACGGAGGGAGTACTAATTTAATATTGACTATTCTGATGTTTAGTGAGTCTCA
GTCCTATTCTAAACCCGTTTGATCAGCACCAACCTCTTCTCAGCCCTATCTCATTCTAGA
GTAGTAGTATAATCTATAGACTAAATTTGCGGTACTATTTTGTTTTATGAAAATTTGGGA
CAAAAACTGAAATTTTAGAAACAAGTTAAATAATTACAAAACATATTATAAGTTATGTAT
AACTTTCTTTGAACTATTGAACACTTTTGATTTGAAATATTTGGGTAGTTTAAATGCTAC
ACTATTATAGCAAATCCACATATATTTATTACTACCTCCGTAACAAAATGTAGGACATTT
TTTATGCCCTGTGCAAAACCAAAACATGATATACTGAGGTAGGTTATAGTAGTCTACGCC
GTTATAGTATCCTAGAAAAACACCATTTTCATTGATACTCCCCCTGTCCCAAAATAGCTG
TCTTAACTTTGTACTAGCTCTAGTATAAATTTGTACTAAGTTTAAGACACTTATTTTGGG
ACGGAGGGAGTATTAATGAAAATGGTGTTTTCTGATCTTTTTAAGCATTTGAATAAGCTT
TTAACATCATTTCATAGTATATATGTGCGTAGATTTCCCCCTCGGTCAGTTTCTAATTTA
TCTTTAACTATTTTTCTGTTTGAACTGGATAGTACGAGCTCATCATCAACTTACCACGTA
CGGGGACATATATACATGTCATCCTGTGGCAACGCAAACCAGATTGCTATAACTTAATAT
GTTGAGCAGCTAGTTAATTATGTTCTTATTCTACCCTTGGAATTGCCTTGGATTGGTCCA
CATGCACATATATAAAAGACGTTGATGCATGGTAATTAAATTACGGCGCAGGGGTACTCA
CGGCGAAGCCAATCATGGCAACACGGCCGACGAAGAGCTCGTTCTCCTTGGTGAAACCGA
TCCCGCCGGACGTGCCGAAGATGCCGTCCTCCGTCTTGGGCTTGGGCGCAACGACCTATA
CATATATAATCAAAACACAACGCCGTCAGACAACTACAAGGAGAGGAAGACATCACCAGA
CCTGCATTGGTGGCAATGAACATGTAAGGCCCAGGCGCGAGCTGACCTTCTTGGCCGGCG
CGGCCTTGGTCTTGGACTTGCCGAACAGGGCCATGGTCCGGACGGAGAGGGACGGCATGT
GCTTGTAGTAGGCCGCCGAGGAGGAGGAGAGCGCGAGCCGCGAGAAGGGCGTGGACGCCG
ACGACGGCCTGGCCGCCTGCAGCAGGCTCCTGCCGGAGGCCACGCCGTTGACGCCGGACA
TGAGCATCGACTGTGCCATGGCCGCCTGCTAGACTCCCACTCGCGACGATATCGCTTCGC
GCTTCGTCTGTGGCTGTGGCTGTGGCTGTGGCTGTGAGGGTTCTATAGCCTGGGGGACTC
TGCTCTGCGGCCGCGCGGCCACGTTTTATGAGATCGCGCGGGGTGTTCCCGGGCGTACGT
GTGGCGCTGCGGGGGCGCGCGATTGGCGAGCGGCGTGGGCGAGGATAGGGTGCGCGAAGG
GCGCCCGAGAGACCACGTTTCCCCGTATCCGACCAGTGGCCTCCGAGCTGATACGGTTCG
TGCGATCGATCCAAGCTGACGGGGCACTAGTAGCAGACGGGCTAGCAGTAGCAGGTGGTT
GGTACGCTGCTGCACTCGCCTCACTGAAAAGTGCTGCAGGGCCAGGCTGCAGCGGCGCCA
CGCGTGTGGGAGGCCACTGGTATGTTGTCTAGTAAACTTGTAGCGTACCACGTTGGAGTG
TAGCGAAGTGGACTGTGATTGGGCATGGCTTTCGTTTCTGGTAGCGGAAGCGCCATGCGT
CGCTGAGCTAGTAATTCCTTTTTGGTGGTGGCCTGGTGGAAATCAGCAAACCGAATTTCC
AGCCTCCGAATCTTCGCGCGAGGTCCGACGAACTCAGTCTACTCCGCATCTTCGCCATAG
CGGTGGCATTCTCCCGTTGTGGCGTGACCTCGGCCACGAAGACGATACTGGCGTTTCACA
TCCGTCATGACAATATCCAACGGTGTAACACATTGAGCGCCGCTTCGGTCCTAGGATAGC
CGGAGAGTGGTAGGTGATGGCAATGGAGTCCTTGCCTAAAATGAAATGGAAAAAAAAAAG
GAAGCTGTATTCGTCGGATATTCCCTACTCAAAAGGAGCTTAACAGAAAGGAAATTATTC
TATTTATAGGATAAATAAGGCTACCGGAGCAGAGCACACATCAAATGGTTTCGTAGTGTA
GTGGTTAGCACTCCAGACTTTGAATCTGGCGACCTGGGTTCGAATCCCGGCGAGACCTCC
TTTTTTTCTTTTGTCTTAAATTTATATACCTAGAAATAGAATCACCAGGAAATTAGTACA
TCAAATGGTTTCGTAGTGTAGTGGTTAGCACTCCAGACTTTGAATCTGGCGACCTGGGTT
CGAATCCCGGCGAGACCTTAATTTTTTGAAAGATTTTTTTAGCCAATATTACTATTTAAA
TGTGTACTCTGTTATTTATTAGCTATTTTCATTTTACAATGTACTTATATTTTTTCCTGA
AACAGTATAAGAATTTTCTTACACTATAATACTTTAGTACAGAATATTTTTTTAGCCAAT
ATTACTATTAAAATGTGTACTCTGTTATTTATTAGCTATTTTCATTTTACAATGTACTTA
TATTTTTTCCTGACATTTGGTGTCTACTCCCTCTATCAAAATATAAGAATTTTTTTACAC
TATATAATACTTTAGTACAGAAGAGTACATGGTACATTGTAATCACGCTTTTTTTTTCAT
TTTACAATGTACTTATATTTTTTCCTGACATTTGGTATCTACTCCCTCTATCAAAATATA
AGAATTTTTTTACACTATAATACTTTAGTACAGAAGAGTACATGGTACATTGTAATCACG
CTTTTTTCACTGACATTAAGTATTTTCATGGTACAGTGCACATACCTTCTGTTGCTACAG
ATACTCGCTACAGAAAGAAAGATGTTGAAGAATACGTATCAAAAACTATACACAAATAAC
ATTCACAATGAAACATTAAATAGCTCAGCAAAAAGAAATTATGGCTTACAAAAAAGTCGC
CTGAAGCATCTCTAATACTCCCTCTGTATCGAAATATTTGTGGTTTTAGTAGGCTATAAG
ATTAGATGAAGTTTTAAACAATACAAACACTTCAAAAAGAATCTGTTCAAAACGCTGAAT
CAAGGTCGGGTTGTCCACATAAGTCATGATGTGATTCCACTAATGCTGGCATAGCCACAG
AATCTTTCCGGGAGACATCTTAATACGAATTCATCATACATACCAGATTACATATATGGA
TTGTCACTACAGTCTAGAGGCTAACAACACTTAGAACATACCTCTGTCTTCTGATTTACA
CTGGTGTGACTATAACCTTGCCAAAATATACATTACACTATCAAGAAAAGACACATTCAG
TCCTGATGCGTCTGCTGATTTCTCTCTCGCGCGAACGCTTTAAATAGGTCAAGCCCTAAA
GATACATTGAGCACATTCATTCCTGCCATACCAGAAAGGGCTAGTGGCAGCTCAATGCCC
TTATCAAACTTGTGTGCGTCGGTGATCAGTCTGTATGTGATCAATATGTGGCAGATCACC
CTTGCTGTGACAAAGGTAGTCCAGTTGAGTACCCATTCCAGTTTCACCAGTTTTCTGTTG
AAATCGCGGAATCCAGCCATTCTCCTCAATTTCCTTACATGCAAGAATATGGAGTGCATC
TGCAGTCATAAAGTTTGTCAATATGTCTGCCGTCGCTGCAACCAAATGTGCCCCTTCCCC
ACTGCTTAAGGTGAAGACTAAACTGAACTGAACTAGTTAGTACGATCGATGGTTATACCC
TTGTTCTTAAACCGGGACATTAATGCCTCATCAATATTGTATTCAAGCAACCGTGATGCA
TACCCGTACAATTGGCAAACGGAAGGGAACTTAACAGGAACCTTTAGGTGGATAGAAAAT
ATTTTGTCCACAAGGCAGATGACATAAATTAAACCATTAGTGGGTCAAACTCAACAAATG
GTTTCGTAGTGTAGTGGTTAGCACTCCAGACTTTGAATCTGGCGACCTGGGTTCGAATCC
CGGCGAGACCTGCTTTTTTTAGCAGGCATTTCAGTTTGGTGAAACTTTGTTTTTTGACTG
ACATTTTGTATTGGAT