Map Locations of contig_65446 (3883 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012




Predicted Genes from contig_65446

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_74252 1 631 bp AK370494 Available Available None





CDS Structure of MLOC_74252






Contig Sequence (3883 bp)

>contig_65446 3883 assembly3_WGSMorex_rbca.fasta
CAAGTCTGCGAGTTTTGACAAGGTCCGACTAACCGGTCCACGAAGTTCGCGGAACGTTCG
AATCGCCCCAGAAACAAAAATCAGTGAGTAATAGCATAGAGAAACTGGCCAGAATGGATC
ATATCTGCGAGTTTTGACAATGTCTCCATAACCCGACCCCGAAATTTCCCGAACGTTCGG
ATCGCTCCGGGACCCAAAANNNNNNNNNAATAGCATAGAAAACTGGTCAGAATGAACCAA
ATCTGTGAGTTTCCATGAGGTCACCGTTACCGGACCCCAAAGTTCCCCGAACGTTCGTAT
GGAAGGAGGCGTTGTCTGGCACGGTGGGGCCATCGACGGCAGGCCTTCAAGGTCGATGCG
TCAGTAACTGTTCTGAAGATGGATTGATGGAAGGCGGTGGCGCCGACCTATGAGGGTGCG
TCGGACCGGTTTCTGCCGCTGGCCCGGTATGTGGCTCGTTCGGGGCTTCCAGCTTTAGAC
GTTAAGCTAGATGAGAGGTTTGGGTATGTGGTTCACACTTTGTGCATCCTTTCATCATTG
GATAGGAGTAACGACAGAAGTTGCAAAAAGGACGGTTCCAGACATATTTACGTATTGCTT
TGTAAGATTTTTATGAATAATTAGTAAAGTGACTGCATGCATCTTCCAGATGCTGAGACC
GGAGGTCGTCCTCCTTTTCTAAAAAAAAATCCATAGCTCGTCGGAGAAGGATTTTGAGCT
CAAGGATTCTCATTAACTTCTCCCTGAACGACGACGTCTGTTTTGCGCCTTCCCGTAACA
TTGTAAATGATTTGAGAAATATAATCAGGAGGTGACGCTCTACAACCTCTCCAAAACTGC
TTTTCTTGGTTTTACCTTGGTGTTTCTTTCATATTTTTTTATGTTTTTCTAATCTCTTAT
TTTATTTTTTCGGTTTTCTTTCATATTCCATTTTTCTTTTTCTTTCGTTTTTTCCCTTTC
TTTTTCTTTTTTCGGCCATCTTTCAAATTTATGAACATATTTTCTGCAAATTTGCACAAT
TATAGAAAATCATGAACATTTTTTGAACCCGTGAACATATTTTTTTTAAACATGAACATT
CTTTGAATTGACAAAGATTTTTTTTACACATTCACAAACACTTTTGGAATTGGTAAATAT
CTGTTTTGAAACCCGTGAACATTTGTTTTGAATCGACCAACATTTTGTGAATCGTTGAAA
CTTGTTAAGAAATTTGGGGAACATTTTTCATAATTTACAAACTTTTTTGTTTTGATGAAT
ATATTTTTTGAAATGCATGGACCTCAAACACATGAATCTTTTTTATCGGCGAGCCATTTT
TTTAGTTGTTGAACATTTTTTTAAATTTTCTAAATAGTTTTTACAAATTCATGAACGGTT
TTAAATACACGATCATTTTTTAAAAATCATGAACGTTTTTCATTTGCCAAACTTTTTTAC
AAAATCTTGAACATTTTTTGAATATGTAGACGGAGAGAATACGCCAGAACGCACCCACGG
GCCCAATTGTCTGCCGCAATCTGCAGACGATCTAAGCTTGAATCATCTTCAAGTTTCCGT
ACAACAAGCAAGACTCACAGCTCTAAAATTCTTTTATGCTATCATGATTCTTAGTTTCAA
GCTCCAAGTAGTCAAATACATACAGATAACAGGGTAGCAACATGAAACGGATTACTAAAA
CCGAGCAATAACAACTACTCGCTGTGTCGAGGGGACGAAAACAGCACGGCAGGTTGCTTC
TAGCTCTGGCCTCGGCCTCGGTCGTGTGATGAATCATCGCTGCGGCTGCTGCTGGTTCTC
CCTCCGCCGTGCGTACCGGGTCCTGTCGTTGTACCTTGGCCTGTCCGACGCTCTCTGTGG
CACAGGCTCCACTCTCCTCTGCCTCTCCGGAGATCTCTGAACAATCTCCCCATTCACAAA
CAGCTCGGCTGCACATAACAATCATACGTCAGAATAAGATTATCTGTTATGCTCCTCAAA
CACGTGTTACAAATATCGCCGAGCATGTAAAGCAAGACATAAGTGAATGCAGCCTCTCTT
AGTTGTGTTAACTTTTCGTAAACAGTAACTTGCACACTGCATCAATGCCTGTCTCTAGGA
CATCAGACTGGCAAAGGAACAAATAATAGTATGCTAGTATGCACACCAAGGCACGGCTCC
GCAAAACCACTTGCTTTGACTACGCCAAATTTTATGGTAAAATTAGCAAAGCAAAGCATT
TCTCTTAGGATATAATCAACACTAGAGGGACCTCTCTTACCTCTACAGATAATTTTTCAT
GTTTTGTCAGCACAAATACCATTATAGAATATGCAGTGACTTGTTAGAAGCCCATTAGCA
CCCAAAGCATGAATCACGAGCTACACTTCATTGCTTCAGCCACATTTTCAGTCGTTGAAG
ATACGTATAAAGACCTGATTACACACAAATGCTCGTACCACTTGATACTGTGCATTGTTA
CTATTTTATACTCCCTCCGTCCAGAAATACTTGTCATAGGAATGGATGTATCTAGATGTA
TTTTAATTCTAGATACATCCAGTTTTATACATTTGCGCGACAAGTAATTCCGGACGGAGG
GGGTATGTACACATAACGCTCACAGCACTTGATGGTGTGTGTTAGGCGTCACTGCCAACC
CTAGACAGATTCGAGCAGCAATGGTTGTAACTAAAGAGGGAGATGTTTCATGATAGTTGC
ATGTATCTCTCTCAACTCTACACATATTAGCAGTACTTGGGGGACAAATAACCTTCAGAG
AACCACATGGACTACAGAGCAAATGTTGGAAGTTGACGATACTCATAAATACATGAGTAT
ACTCCTTGCTGCTACACCACTTTATATGGTGCATTAATAATGTATTATACATAATGCTTA
CAGCACTTGATATTGTGTGTTAGGCACCATTGCTCAGCAGAGACAGATTAGAGCACCATG
GGTTGTACTGAAAGAGGGTGTATGTTTCATGATATTAAAATCTACTCACGTGCATGACCA
TCTACAAGTTTATTAGCAATTGAATCAATGATACCGCCCATAATGCCGCATCAGATGACC
AAGAAGAAATCATTTAAATGCTCATGGACAACACATGTCTTGCTGGTTGGCAAAAAAAAA
AAAAAAGATGCACTTCTGTACTGCAAGTCTGTAACCTTGAAAAATCTAAAATGGTTGTCG
ACTTTAGCAGCTATAATCACACAGAGAATCTTATAGACTAACTCCCTTCCTCAAATGGCT
TATCATCGACAGGAAGTTTTGAACTTAACATGGCATTGTTTAAACAAAAAGGCAGCAAAA
GATGGTTGTGGGATATGTATAACATGTCCAGAATTACCTCCATAGTCCTTGTGCTCAGGG
TCAACATAGGAATCCGGGAGCACAAAGAGAACGCCAGGAATCCCTGCAGCACAACCAAAA
GATGTATTCAGACACACCCTATGGGAAGGAGAAACAGGACAGGTTAGCTCTGGTAATTTT
AGATGTGGTTAAAAGACAAACCTTCAAGCTTGTTGGATGTCTCTTCATCAATCTCACACC
CGAACCCAAAGTAGCGCTCACACGAGACGTTGTAAATCTTCTTCTTGGCCTCTTCCTCGC
TGCGACACATGAGGGGACAGAACAATATCACATCATCAGGCTTACACTAACAATACTTGA
CAGAAATAAGAAGCAAGCTTGCTGACACTGCGTACTTCACACCCCAGGATATGTTCTAAA
ATGGAGATGGTGATAAGATAATACCAGCACGCAGGCCCGCAGCGAAATCGACAGGATGGA
TTTGTACCTTCCGAGGACCTTGGCGAGGGTCTGTATGTAGCAGTCGATCATCTGGTGCTT
GGAGGCGCCCTCGCCGCCGGGCTTGTCCATGACGATGAGCCAG