Contig Data
morexGenes
Links



Map Locations of contig_65397 (5770 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map locationNo map location




Predicted Genes from contig_65397

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_74220 2 1832 bp AK358124 Available Available None





CDS Structure of MLOC_74220






Contig Sequence (5770 bp)

>contig_65397 5770 assembly3_WGSMorex_rbca.fasta
CCCCCCGCCGCGCCGTGCCCCCCCCCCCGCCATCCATCGCCTCCCCCTGCCCCCTTCCCC
GCCCCCCCGGCATGCCCCCCCCCCCCTCTCTCTCATTTAGTGTGACTTTTATATTGATGA
ACCCTAGACCATGGAGCGAGAGGGTGCAGCTCCGAAACTGTTAGAGCCACACAGAACAGC
ACCACAAGGGTTAGTCGATCAACCTAATAAGCTTTGGAATTGGACGGTTCTATGATTTTT
TTTTCATAGAATATTGATCAGTAGTTATGCCTAAGCATTGATTCTATTTGAGAGCATTGT
CATTTATAAACTAATTGTTAGAGTTCTTCGATTTGTCGCAAAGCTTGACGATGGCAGCGA
GCATCAAGTTTCCCAACATGATCCGGAGTTTGAGGTTAACATGAAACGCTTTTCGGTTGA
AAAAATGATAGAATTCATTGGGTCTGGAATTGTTTGGGGAGTGGGCAGGAAGTCCATATT
TTGTGCAAGGACAAGCATTTTGAGTCAGTTGAGAGGATTGATAATTACTGCAAGTTGCTG
ACATCATTTCTTGAGAGATGGGAAGAGAAAGAATTGCTTGTGCTAGCTCAAGTTGTGGAC
ATTACAAAGGGGGTTATGGACATTACAAAGGGGGTTATGGCATCATCTTGTTCGGAAACT
ATCCCATCTAGTGAGATAGTAGACAATATATTTTGCTCAAGTTCTGATGTTTACCAGTCA
AATGCTATTAGTGCATCATGTGTTGATGACTATATAGTTTCTAATGCGCTTCGTAATAAT
GAGAGATATGTGCAACCTGATGCTGAAGTTTTCATTGATTGGTCCACTCTTGAGATAACT
CCTATTGGTGATGATATAATAGTTGCTATGCCCGAGGAAAACATGTGTGTGGTACTTGGA
ATTGAGGATGAGGTTGAGGATGCTCAACCAATGAATGATCCAGCTCCGGTTGTCGTGTGC
CATGTTAATGAGGAATTAATGGCTGAGGGAGCTAGACGAGTTGATGACCAAGTTCCTGAA
GACACAGAAATGCCATATGAAAAAGATCATCCAAAAGTTGAGAAAGGTTATTTTCAACAA
TGATCGATTCTGGAAGGGCTGTGAGACAATGGGCAATTAATGAAGAATTCAACCTTGGGA
CTCACAGAGCTGACAAGAGTAGGTGGATGGCACATTGTATGGTCGAGGATTGTCCATGGA
AAATAACTTGTCGTATTATGGCTGATAAGACAAAGACCACGGTACTAACATAGCTTAATA
CTTTATTTTTTGTGTTATTTCTATTATGGTAGCATCATATTATTGTAGCAACACTAATAA
CTTTTTTATGTATGCAGGATAACCAGATGGGACCAACACACACATGTGTTTCAAGTAGCA
GGTGAAATTCAGCAATGGCCTCACAAGATTGGGTTCAAGAAAGGTCTAAGAAAATTTTGA
GGGATGTCTAGATTGGGTGTCTCGCAAGCTAGCTCTTGACCTATGACGAGGAGGTAATTT
TCTGGCTTATCTTCAATATCGCTACAAATATGAAATGTTTTTATTTTAAACCATGTATTT
TTCTATAGTCAATCATCTCTTCATAGCCCTATTGGAGGTACATCTTCGTTGGCCGTCCTA
CAAGGCAGCCTTGTTTCAATCACAAGGAGGTGAAAACAAATCTGATGTTTTCCTCGAATT
ATGCATAATATTGGTCTTATTTTCTAATGCATGAAATTGATGTATTATGTAGGCAACTTT
CTATGAAAACAGAGACTCTCGCCTCTTCGTCAAAAATAGTTGTGAAGGCTGCAAAAAAGC
TTACGCCAAGGAAGAGAAAAGGAGTGTAGCATGCCATTTTGTGATTTTGTTACGTGTTTA
GGAAGCTTGCATGCCGAGGCGGTGGCACCGGGACGAGATGCGGTAAGCCGGTGCGGTGCT
TCGTTCTACGATCGTCTCATTTGACGAGGAAACGACGTGAGCCAAATTCGTCCTAACAAA
TATGAGGTATATGGTCCTAGACATGGAAAAATAGGGGGGAAATCAGTTTATGGTATTTTA
TACAGCTATCACTCAAACGTGTGCTATATGATCCAATAAAAAGGCAGATGTGCTATGAAA
GCAAAGACCCATGAAATATCTGACATTTTCTCAAATTACCCCGTATTTAGTGCCTGTTCG
GAATCCCTCCGCTCCACAACTCTTGTTCGGAACGAAGCAGAGCGGAGCCGAGCAGGCTGC
AATTCGAATTTACAGAGCGAGGGATTATGTGCTCCGCAGATTCTAAATATTTCGTGGAGC
TGTTGAATTACCGAACATGTCCTTAATTACAATCGTTTCAAGGGCGGACTGAGGGGTATA
TGATCGTGCGGACCTACCGGTTTTGTTTCTGCAAAGGTCTCTCTAGCCGACGAGGCACTC
TCTCTGTTTTTCACAGGTTCTGAAATCCTGTCGACGCTGCCCTCAACTCCTCAAGGCTAT
GAAGACGGACACGGCTTCGAGCCCTGGCTGCAGTGGAGAATTAAGTGGAGATCCACATGA
TCCGACATTCTATCTGTTGCTGGGATGCATGGGCCTTGCATGCCATTCAGATCTGCCAAC
AAGATCACGAGTTCATCGCATCATTCGTGTCAGAATGAATCCACAGCCACACTTTTCAAC
GAGTTCACAGCCACACAGAGTTGTATCAGATCATCTCCAAGAGAGGTGTTAAATAAACGT
CATACTGAAAAATTAGTCTTTTTTACGTGCGCTACCGCTCTGGACGCTCCAACAAAAACG
TAAAAATCGTGCGCGAGGCATAACTTCAGTGTACGGGTAAAAACGGCATCGCGGGTCGTT
TATTTGTTGCGTCCGCTCTCGCGCGTTGCACGCTCGAGCGTCCGCTCGCAACTCCACGTA
TCCCATCCAGCTGCGGCGACGCCGTCGCCTGCGCCACCTCATTTCTTTCGGCGACCGTTC
CGACGCTTCCCTGACCCATCCCCCGCGCCGATGTTGCTTCCTCGTCTCTCTCTAGTCACC
GCTGCACACTGTCGCTCTCCGCACGGCCGCCCACTGCCGCTCGACGCCCGCATGGTGTTT
GACAAAACACCCGCACGGTATCGGTATGTATTGCTTCAACTTTACATTTTTTACATGAAT
TTGATGCATGTTATTTGTAGTTTTTATAGTTTAGTTTAAATTAAACATTGTAGATGAGTT
TCTCATATAATTCTTCCGAAGAAGAATTTGATATGAAAGAAGAGGAGGATCTTGCAATGA
TCCTAGCTATGCACATCAATAAAAAACCGAAGCACGGTGGTTCGGTTATGGGTCAATAGA
AAATTTGGAGGGATAGGATCGATGCCCACAACAGATTTATTTTGTTTGTGTTTGATCTTT
TTGCTTATGTTTTGACCTCATATGTTGTTTGAGCGATAGTGTGCCCTGCATTTTAGCGCG
TTTGCTAGAGCTATGCACACGCTGCATTTCACAATGACAGCTGAAGCCAGCTGGCCGTCG
CGTCAAAACAAACGAACGGGCTCGTGCCGCGAACTGATTTTTAATGCGTCACATGTTGGA
CGGTCGTTGAACATGCTCTCAAGCTACCAACGCATCACACGCGCGCAAATGACAAAGAAG
AAGAAGCGAGGGGCATGGAAAATCCAGGTCAAACGGGGTAGGCGCCGCTGCATATATTAT
CGGTTCTCTTCTGCCATCCGGTCTTGGACTGCCGAGTTTCTTATTCCAGCGATAAAGCAA
GAAAGCTCCATCCACGAACCAGTTTCGACAGCCCCGGCCAAGCACGCGCCGAGCTACCGA
AAGCCATGGATCCCGCCGCCGGCGAGAAGCCGCACGCCGTGTGCCTGCCGTTCCCGGCGC
AGGGACACATCACGCCGATGATGAAGCTGGCCAAGGTCCTCCACCGCAAGGGCTTCCACG
TCACCTTCGTCAGCACCGAGTACAACCACCGCCGCCTCGTCCGCTCCCGCGGCCCGAGCG
CCGCCGCCGCGGGCTTCGCCTTCGCCACCATCCCGGACGGCCTGCCCTCGTCGGACGCCG
ACGCCACGCAGGACCCGGCGTCGCTCTCCTACTCCACCATGACCACCTGCCTCCCCCACT
TCAAGAACCTGCTCGCTGGCCTCAACGGCGGCACGCCCGGGGCGCCGCCGGTCACGTGCG
TCGTGGCGGACGGCCTCATGAGCTTCGCCGTCGACGCCGCGAGGGAGCTGGGCGTGCCGT
GCGCGCTGTTCTGGACGGCCAGCGCCTGCGGCTACATGGGCTACCGCAACTTCCGCCCTC
TCATCGACCGGGGCATCATTCCCCTCAAAGGCTAGCCACGAACTCCTCATCTTCCTCCTT
CAAAATTCTCACTTGGCCTAAATCTTCTTCAGTATCTATATCTCACCAACGAATTGATTT
GTTGCGCGGAGATCGAACAGACGAAGAGCAGCTGACGAACGGGTTCATGGACATGGCGGT
GGACTGGGCGCCGGGGATGAGCAAGCACATGCGGCTGAAGGACTTCCCGACCTTCCTCCG
CACGACGGACCGCCACGACACCCTGCTGACCTTCCAGCTACACCAGGTGGAGCGCGCCGA
GGCGGCCGACGCCGTCATCATCAACACCATGGACGAGCTCGAGCAGCCGGCGCTCGACGC
CATGCGCGCCATCACACCGACCATCTACACCATCGGCCCGCTCAACTCCCTCGCCGACCA
ACTCATCCCCCTCGAGGACCCCCTACGCGCGGTGAGCTCCAGCCTCTGGAAGGAGGACCA
AACCTGCCTGCGGTGGCTCGACGGCAAGAGGCGCCGATCTGTTGTGTACGTGAACTTCGG
GAGCGTGACCGTGATGAGCAGCCACGACCTGGCGGAGTTCGCGTGGGGGCTGGCCAACAG
CGGCCAGGAGTTCCTCTGGATCGTCAGGCCGGACGTCGTGAAGAGCAGCGAGCTCGCCGG
CGCCGCGCTGCCCCCCGGGTTCCTGGAGGCGACCAGGGGCAGGGGGCTCGTGGCGAGCTG
GTGCGACCAGGAGGCGGTGCTGCGGCACGACGCCGTGTGCGTGTTCCTGACGCACAGCGG
GTGGAACTCGACGGTGGAGGCCCTCTGCGGCGGCGTGCCGATGCTGTGCTGGCCCTTCTT
CGCGGAGCAGCAGACCAACTGCCGGTACAAGTGCGTCGAGTGGGGGGTGGCGATGGAGAT
CGGCGACGACGTGCGGCGGGAGGCGGTCGAGGGGAGGATCAAGGAGGCGGTGGCCGGCGA
CAAGGGCAGGGAGATGAGGGAGAGAGCGGACGAGTGGAGGGAGGCGGCTGTCCGCTCCAC
GGCGAGATCGTTGACCAATCTTGATTCGCTCATCCATGGCGTGTTGCTATCTGGCAAGAA
TAGTTAGAGCATCTCAACGGCCGCGCTTCGCGCCACATCCAAAAAATGTGTTTGCCGCGC
GCACGCTTTGACTGATTTAACGCGGGGATAGGCGCTGACTTCAGTAGCCGCGCTAAAATG
CAGTGCGCGCCGCTTCAGCAGCGCGCAAAAATGCAGCGCGCGCACAACATTTTTCGATGC
ACAACATTTTTAAATATAGATAAATTGCAAAATCGGCAAAATACTAAAAATAGATTGCAT
AAAATAAAAAACGATACAAAGTTATTTTACATCGGTGCAACTAGATAGATAGTTCGAAAA
CATAGATAAAAGTACGGTGCAAGTAGATAGATAGTTCAAAAATATATAAACTATTCCCAG
TCGCTCCAATCATCACCATCATCATCGTCGTTGGTGTCGTCAGAGGTTGACAGCCATATG
TCCAACCAAC