Contig Data
morexGenes
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Map Locations of contig_6535 (4469 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location No map location




Predicted Genes from contig_6535

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_74202 1 1034 bp None Available Available None
MLOC_74203 1 255 bp MLOC_74203.1 Available Available None





CDS Structure of MLOC_74202






CDS Structure of MLOC_74203






Contig Sequence (4469 bp)

>contig_6535 4469 assembly3_WGSMorex_rbca.fasta
AAATTTTCCCCCCCCCCCCCCCCCGGTACTGCATTAAGATAAACTCACTTTGGTTATTCC
TTATGCTAGTACCAGAATCTCTTTCCTAACTTCTCTTTACATTTCACCGTCCTTTTAATT
ATATTTCCCTCTATTGTATACACATGTACTTATTTTTTAATTCAGAACTCTCAAGAGATA
AAAGAAAGATGGGAATGGCCTACAAAGAGAGGACTAGTTCCCATGCCACTAGATTCTGTT
CTCCTGCCAAGCACTCTCAACCAAGATACCCCACAATTTCAGAGGCTCTGAATTTCAGCA
CCATTATGTTCTGCATCCAAACCTGATTTGATGGCAGTTCAATTTTGTGTACCATTTCCT
GCATGTCCTGCCCACTGATAAACCATCTCCAAGTCCTTTTGCTGTTCATGGATTAGACTT
GTATGAATCAAGCAAGATTCAGGCCTCCTTTGGTTCATACGATGGGAATGTATCTCAATT
TCTATAGGAATGAAGATGTCATTTGGCTCATAGGATAATAATTTTTCCATTACGTCTGAG
CCAATGTTTTTTCTCTTTTAAATGTGAAGGATAGGGACCAATCCTAGGTACGAATAGGAA
TCCAATGGACTCAAAAGAAAATTTTACTATAGAATTCCTATAAAACTTCCGTAAACCAAA
TGAGACCTAAAATGGAAATATAGCAGGTACCATCCTTTTTATCGAAAAAGTCTTTCGTCC
CTCTTTATAAATAAAGCAAACCGTCAGATCACAACATTCGACATATATTCAATACACGCA
CACAAAGAAGTAGCACAAGACAACATCAAAGGGTTCCGCTGAGGGCACGGCTCAAGAAGC
TCTAAGAAACACACACACCCACGCCCAAAGGGATACAATGAGTGCTCATCTATGGATACT
TTTTGCTATACAAACATTTGTTTTTTTAGGTATACAAACATGGTCGAAACTATGAAAAGA
TTAAAAAGAACATGTCAGGTTGTTCAAAATTTATTTGTGTTCTTCTTAAGAGAAATAAAA
TGGAAAAGTATTAGACTTTCTGTAGCTTCCAAGGAGAAACATTACGCTTCCCTCGTAAAA
TGATTTAGCTAGGACGCACATATATGCATGCATACAGCTAGGACGCACATATATATATGC
ATGCATACATGGCCAGAAGAAGGCAGAAGTTGAAAAGAAGGAGCTATAGATAGTTGTTCA
AAATTTCATATTCTTCTGAGCTTTGAAGAAGAGAACGGAGAGAGAGAGAGAGAACATTTT
TTCCTTTCTGAAGCTGCCAAGGAGAAACAGTAGGTTACCATTGTACATTTGTCAATTAAT
TTGCTAGCAGGCTTGCAGAGTTTCTAGTTGAGGACAAAAACTGTGTATATATACTGCTCA
AAAGATGCTGCTGCGTGCTGGATGCTGATGGAGATAAGAGTGGCAGCAGCAGCAGCAGCA
GTGGCACCATGCATCTGCATGGACAGATGATATTTCACTGGAAAATGTAACATGGCTCAT
GGCTGTGCAGCGCTCACTTGCTACCATGCATGGTTTATTAATTCATCTGAAACTAGAAGA
GACCTGGTCTCTGTCTCCACCATTGTTGTGTTATGCACCATGCCACCACCTATATGTAGC
CAGCAGTGTACCTTCTACCTGATGCGTCTCTATCTCGAACAGTGGAAGGTCCATTTTTTT
TTCCTACTTCCACCATAGAACTCCAACGTATTTCATGGTCACATTGTTCATTCTATTTGT
ATGCATGTATGTATGACATTGACATACATGCATTTCTCAAAATCCGGTAGAAAAGATCCT
TTAGAAAATGAATCCGACAGAACTGTATATACGAATCTTGTTGAATCCCGTCAAAAGAAG
AAATCATCCTACCTGGGATCACCATCCAACAAACGGACTAAAGTGGACTTACCATGATTT
TCCATGAATAGCATGCTCCTGAGTACTGACCATATTGCCGGCATCTTTAAATCAGTAATA
GGAGCCTTTTATAAAAGGCACAAACTGTGATCAAAACTTACTAGGTAAAAGCACCAGCGG
TAAAGACTTTCATTTTGTGCCCTGACAAGCGCTAATAATGTTTGTTGAAGTCTTTCAGTG
TCTCGTACACCTTTTAATGATAAAAAAGTTTGTGAATAAACCTTGGTGTGGACCTTGAGG
CTAACACCAACAGTCAAAACTACTTTCTTACATTCTCAAAATGTACAAAAGCTATCTTGG
CTCACCTGCCACTGCCAGTAATACTCAATGCCCTTAGTTAATGGGTGCACTTTCCCTCTC
GAGAAAGTGAAGGCAATTGCATTTGCCATTGCTGCTCAGCTTAACCCTACAGCCTCTGAA
AAGATTGATGCAGCTGCCCTGCCTGCATAGAGAGCAAAACAGAAAAAGAAAAGAAAAAAA
AGCATTGCTCCCCTTATCTTTTCTCTCACAAGTCACAAACACTATTTTGAATTCAAGCTG
GCCCTACCAAACTGGCATCAAAAGAAGAGGGAATATTAACCTTTGGGGTGATGAAACCAG
AGGTTTTTGGGTGGGGCGGGGATCCCTCCTACAAAGAAGCTTCACTTCTGCAAGTACTAC
TAGACTTGTCCCAAAGAAAAGAAAATTAAAAACAAGTGGAGTAACCAAAAGGTGCACTAA
ATATCATGTTGTCATCTCAACAGTGCAACACCAAAGACCAAACCAAACCAAACCAAACCC
CCCAAAATATAGATTGACATTATGGTGTCATACATCTATCAAGCATCCCTCCCATCTTTC
TATCTTATTAAAGCAGCATTCATCCATCAATCCGTCCAATCCTACATGCTGCTCCTATGA
ACCTACCATGGGGTAGGGTATGTATGATTCGGTAGCAACATGTGATGCGGAGAGAAGGAC
TTGATCCATGCGTCAGGACAAGGCCTAGAACTAAGAGGGACAGAGAATGACAAGGGGTCA
CTCCTTCCTCCCCTGGCTGGGTCTTTTGTTTCCCTAGACTTCTTCTGCGGGCCTTCACAT
GCCTACAAGAAACCTACAACTTACAGAGCGTACTAGTAGTAGCTGGTACAACTGCATCTA
GTGGCAAGCATCTTGTCACTCTCCTCTAGTCATCTCCCTCTCAGCACATTACACATCAAA
CAGAGCAAGTGAGCTTGACAGAAACACCCCTCTTTTGCACATTCGGAACATCAATGTATC
TGCCGGATATAAAGACGGACCACGTGGATTCAGTTTGCTGCCCAACAACCAACAATAAAG
GCACTGCACAACAAGGGATGATCGTGGCACCGGTTACATACATGCCAGCACCAATACAGA
ACCGAGATCAACTGTTCTGATTCTGATACATTAAAAGCATTTAAGCATTGGTACAAGGGA
TGTGAGCTCAACAGCCAGTTGAAACTTGAATGTTTTCAGTCTACATGCACTTGAAACAAG
GAATGGGGGTAAGTTGATAATTTCCAATGGTATACTACTTGTCAACCAAAGAATCTCAGC
TCATGTCTTCACAGTTGCAACTTCCGCTGTCATCAGTGTAGAAATAATTATCCTGCTAAC
AAAAGAAAAGATGCAACCTTTGAAATCTATCTTGATATCAGCCAAACCTGATTAAAAAAC
ATATCTAGGGGTAATTCCGAATGGAGGGAGTATATATATACATATATAGGGAAAATACAT
CCTACCACCTAGGGGTAGTTGCACACATGTCTCATATACTATAATGTGGTAGTCTATATG
CTACTTTATCACTGTAAGTATGTTAATATATTATATACTCCCACTGTACCATAATAATTG
TAGTTGGGGAGAACTCTCCCCAAGTTCTCCCCAACTACAATTATTATGGTACAAAAAGGG
AGTATAAGATACTTCAAAGTGAGTTACATGAAAAAAATTGTAAATTAGCCAATGTTTTTA
CTCCCTCCGTTCAAAAATAAGAGTCGCACATTTAGTACTAAATTAGTACAAATTTTGCAC
TAGATCAACTACACTTATTTTGAGACGGAGGGAGTATTATATTTACGAAATATGTATATA
TTTATATACATAAAAAAGGCATACTCAAAATACGAGACATACGACCAAAAAGAAGTATAT
ATACTCCCTAAACATTTTTATATACAACATATTATGCATACATGCTCTCCGATTTGTTAG
ATACTACATACAACATATACAAAGCTCAAGTGATGGTAACAACCACTGGATGGTAGGAAA
TATATATATGTGTGTGTATGTGTGTGTGTGTATTATTATGTATAGGGTCACGCTTCTTTG
CCCCCTCTAATTTAACATAAATGCACCGGGGGTTTTAAGTCCTGTAAATTTTGTCTTCAT
ATGTAAACAGAGCAAACCATATGATCCCCGTAAAAAATATTGTATGTAATGTTAAATTAC
GAACATAAAAACATAGTGTAAAATATACATAAAATGAATTTTTTTTCTGGCCTTACGACC
TACATTTTGTTTTCTTATGCCAAATTTTA