Contig Data
morexGenes
Links



Map Locations of contig_65211 (5357 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_65211

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_74135 1 733 bp AK376395 Available Available None





CDS Structure of MLOC_74135






Contig Sequence (5357 bp)

>contig_65211 5357 assembly3_WGSMorex_rbca.fasta
GTTTGTCCCTCTCAATGACTGACATTGCCTCATCTCCACCAACATAATCCAGGTTAGGAC
CAACTCTCACAAACTGCCCCCCTATATGAAATCTGACATTCAACAATTCGGCTGGGTCCA
TGTTTCCAAGAACAAAAACCTACATTTCACAAACCATGCATTCTTAGTGTTTTGGTGTGA
TCATAACACTACAAACACCAGTAATCAACCGATTTGAGCCCCACAAAAACTGAACTTTCC
CCTGTTAAAACCCTAACCCTAACCAATCGAAGAAGACACAAAAAAAGCTACCGGACAGAC
GACAAGAACAGGGCGCACCTTTTTCTTTGCTGCAGATTACGACACCGTCCTAAGCTGCGA
TCACGCCATGGTCGTCCTCTCCGCCATGGACAGGGGAGGGGAGTTGATGCGTCGCGGGGG
AAGAAGGGGGAGGAAGGGGGGCAAATGGAGAGTGCACAAATCGAGCTGGTCCGGCTCAAC
CAAATGGAGAGGTTGCGTGGGACCCACAAACAGGAGCCAGGATCGAAGAAATCCCACCAA
ATCGACCTTTCCTCATTTGGATATGCCAGCAAGGTTTAAATGAGACCGGGATTGAGGTCC
TTAGGGTACAAACTTCAGGGATTTAGAGCTCGGGGTTCATTTGCGTCGCGGCTTACACTC
TCAGGGTTCAAATCAGACTTCACTCCCACCATCCATACGGGGAGCCACCTCATCCCTCGG
AGGACCGACCGTGACGCTGCCGACGATGAGTGCATGGCCTCCCCACATCGAGGAGCCAAC
CATGACAAATCCAACAAGGAGGATGCCACTGCAGGGGATCTCGCTTCATCAGCCCGCTGC
TGCACAGGTTGCCACTCACCCGGCTGATTTGTCCGGATCGGCCGTCGCCTCGGCCGCTGC
GGAAGTCACTACTCGCCCGGCCGATCTGTGCGAGCTGACCATCGCCGGGTAGTTGGGAGA
GGAAGGGTTGGAATTACGTTTTTCTAATCCACTGCAAATAACTTTTCTCATTCTCCCGCG
GGCTCATTTCTTTACTTTTTTTCACTTTCTTTCTTTCTCGTGTGGGCTCTCGCGGCCACT
TTGGATCGCTTCTTAGCGAAATCACTAATTAGCGAATACTCCTTTTAAAGATCACTCCAA
CCCATAAGTCGAGATCTTTAAAACTAGATACCATGTTGATAGGTTTTGAAGAACTTTTTT
TCACAAAAAAGGGACCAAAAAACCATGTGTCCCGTGATAGAAAAAACAAAAAACATGTTT
TTTCGCATTTTTTTCCTTTCTGAGAGGCACGGCTGTGCCTCTCACGAAGGCAAAATCGTG
CCTCTCATGGAAGCAAAATTGTTGCTCTTTCGAAAAAACGCACTTTTCCCTTTTCGAAAG
GCACGGGCGTGCCTGTTACAAAGGCAAAACCATGCCTCCCGCGGAAGCAAAACCATGCCT
CTTGCACAAAAAACACATATTTTTCCTTTCCGAGAGGCATGGTCATGGAAGCAAAACCGT
GCCTCTCACCAAACAACAGAAACACTTTTTTCGTTTCCGAGAGGCAGGATCGTGCCTCTC
GCGGAGACAAAAACATGCCTCTCGTGAAAAAAAAACATAAAACGTGGTTTTTCCGAAAAA
ACTTTTGAATTGTTTTTGGTCAAAAAAACTAAGAACGACTAGTGAAAAACCGAAACACCC
AAAAAACAATCTAAAAAGCCGAAAACACGTGTGGAAAAAAACGAAATTCGAAGGAAGCGC
TCAGAACGTGACATGTGGCGGCGGCTGAAAATGTGCCAAATGGCAGGCCGCGGGAGTGTT
CTCTTGGAGGCTCCGAAAGGAGCGCTCGCTAACTAGTGACTCTCCGCTTCTTAGTCATTA
CGTAACCTCACATAAAGCTTTCATAGGTGTAGCACTATTGTGAAGGGAGGTCCTAGTTGA
CGCTCTAAGCGCCACTTTCCTGAACCAGTACTCACAGCGTAGCGTGCATCAGCTCCCGTG
GGCCGGCCCAGGAAAGGGGGTATCACTCGTTCAGAGTAGCTGTTTGTTTCATGTCTCGTG
GTCAATGGTTGACCGGGCCAGTTGACTACTTAATAAATTCTTTTCTTAAAAAAATTAAAA
ATAAAAAATAAATAAAGATCATCAACTTTGAAGAATGTTCACAAATTTGAAAAACATTCA
TCATTTTTGAAAAAAGAATCCATCAATTTTAAAGAAAAAATCATAGATTTTTTTTAAAAG
TTCATCAAATTTGAAAAAAATTCATTGATTTTAAAAATAGTTCATCAATTTTTAAAAGAG
TACATCGAACATGAAAAAGTTCATCGAAATTGAAAAAACTTCATCGATTTTTAAAAAATC
ACAAAATTTGAAGAAAAATTCATCAATTTTGAAAAAAGTTCATCAAATTTGAATAAAGTT
TAATTTTGTTGAGAAATACTTCATTGAATTTGAAAAAAGACATAAAAAATGAAAATATTC
GTACACATTGAAAAAAGTTCATAAATTTGAGAAAACTTCACAAAATTGATTGTTTTTTAT
GAAATTTGGAAATATGTTCACAAATTGGAAAAAAGTTCATCGAATATGAAAAACGTTTGT
CGAATTTGAAAAAAAGTTCAACCAATTTTAAAAATAGTTCAATGCAACTAAAAAAAGTTT
ACCAAATTTGAAAAAAAGTTCATGCAATTAAAAACAAAGACAAAAAAAAGTGAAAAAGTG
AAAAAAGGAAAAGAAAAAAGGGAAAAGGCGTAAGAGGAAAGAAGAAACAGAGGAAGAAGC
AGTACCTGAATAGCTAACGCAGGACGATGGAGTGGTTAGTCCTCACACTACTAACCCAAA
GGTCGCTGGATTAAATCGCAACAAAGGTGGGATTTTCTTTTTATCTTACAACTGAAGAAA
AGAGAAGATGGGCCGAGGCCAGCTAACACGCTGCAGGCGCCGGATAGCAATTTGTTTATA
AACCGGCGCAAGGATTCGCCTATTGTGAAAGGAGCGACCGAGCGGCTGCTTCCTGCGTCG
TGGGCCTGGCCCATTTATCGGTCGGTGCTTCTGGCCTAGCGATGCGAGCGTGCCCGCTTC
CCAATCCCCCGTTTCCCCTCCCTACACGTTCTCGCTCCAGTTGCCGCCGCCAGCCCCTCG
CCCTTTCGCCGGAGCTCCTTCGCCGGCAGTAGAGATGGTGAAAGGCGTAGTCCGGTATGA
CACTTCTACTCTTCGATTGATTACTTGCTAGTCCCGGGTCTCGTCAAGTTTTCAGTTTCG
GAGCTAGAAAAACAAATAACCAACCCGGCTTCCGTCATGTTCCTTCGCTCCAAACCCTAG
CGCCGGTGCACCCCCTCTCTCCTCCTCTGCCGTAGTCTCTGTGCGTGGTGGCGGGTATTT
TTCTGCGTCTCTCGGCGGGTGGGATACCGGGGCTGCGCCTGCTAGCCGAGCTCGTGTGTC
CCGGTTTTCTGCACGCCAGTTGCCAGACGTGAACCATAAAAAGTAACGGGAATTTGGCAG
TTCACAAGCCAGACATCCTTGATAAATAGTACTCCCTCCGTTCCAAAATATAAGACCTCT
TAGAGATTTCATTATAGACTACGTACGGATGTATATAAACGTATTTTAGAGCGTAGATTC
ACTCATTTTGCTTCATGTGTAGTCCATAGTGAAATCTCTAAAAAGGCTTATTATTTAGGA
ACGGAGGGAGTACGTTCATAGCTGTGAATTAGTCCAGTATCGGCTTGGCCTTACTTGTGT
GCTTATTATATTTTCAAATTCAAGTGTATGTTCTTCTGCATCTGAAACCTTGCTGCAACC
TTTGTAGCTATCAGCCTGGACCGGCATTTCAGGAGAGTGAAGAGCAGGGCATGCCTGAAA
TACCGCCATCTGACTCTACAGAATTTTGGCTAATACAGTGGCCTCTAAACCATGTAACCT
GGAAGCATTTTTTCCACCCATGTTACTAGTATACTGCATTTGGGCTCCAGGATAACATTT
TTCTATATTATTAAACAGGTAAATGCTTCTGATTTCAATGGTGAAAAGGTTTCTCTTAAG
CTTCATGACGATGGAAACTTGGGAAATTTGGAGAGTTCTTCAGGTAAATAAACACGATGT
ATTATTTGGAAATTATTTTCACTTGATTAATTACATGTTTCAGTGATCTTAAAGTTCCCA
GCATTCAGACAACAACAGAGTTTGGTTTTTGTAAATACTGTTACTCTTGAGCCTTCAGCG
GGTCTATTTTATCTGGACAGTGGTCTTTATTCCTTAAGACAGTGGTGTTATCATAAAAAT
GAAACAACTTGCTTGTCCATTGTGGAACTTGTCTTCCATTTTGTTAGCTGTTAATAAGAT
TCAGACAATGCTTGTTATTTGATGGTCACTAATGTTATGCAAGCCAAGAAGTATTGGCTT
GAGATCTTAGTTCACTCTGAACTTCCTTTTATTCGAATTTGCTTGTTTATCTGTGCAAAG
CAAACTATTAGTCCCTATTGACTCCTTTAAACAGGAATAGAAATTACCAAGATGTTACAC
TACAGTCTAAAAAAAGATGTTATTCTTTGTGGATGTTCTGACTCCAGAAGTTTGGTATTT
CAAGTGAAATTTCCTTGTAAAAGTTTTTATGTAATGGCCAGTTACATCCTCCTCCTTGAG
TACAGATAAGCTAGTTGAATGACATGCCATCCACGAGTAATACGTTGTAGTCTAGCTGAC
TTGTCTAGTCCCTTCTCCATTTTCATTGACTGAAAATACCATTATTTTATCAAAATTGCT
ATGAATACTTTTCCACAAATATTCAGGTTTATCTAATTCTAATTTATGTTATATGGCAGG
GAAATCATATGAACTTGTTAGCTTTGCTGCTCAACAGCCAGATGCTACTGTCTTCATTCC
ATCAGGATCTGAAATGAAAGCCGGTACATGACATGTCAACTTAGTACTCCCTCCGTAAAG
AAATATAAGAGCATCTAGATCACTACTTTAGTTGTTTGGTATTATGCACAGCTTCTGCTA
CTATTAGTTTTCCATTATTGAAGTAATGTGAAATTTGCTGAAGCATTCTACTCTCTTGGT
TTAGTATTTCAAAGTCATATTGATGACAGACGATGGGTTGGTAAACCCTAATTTAGTTTG
TATTATGTAGACACCTATTAATGTTTTGCTTATTTGGCAAAACTTCAATTCACCGGATAC
TAGTCAACCATATTTTGTAGCACTATTTTTGATTTCAGAAAATTTGCATCTTAGTCTTCA
ATGGAAATCTATACCTAATAATAAAGAGGNNNNNGCTTCCGTCGGAAAACCCACCGCATC
ATTTTTATAAAAAAGCCCCTGTAATTTTTGTTATTCAACCCGCGCTTCATCATTTATCTG
CAATGCAAAAGGAAAAA