| Morex x Barke POPSEQ 2013 | Oregon Wolfe POPSEQ 2013 | Morex Genome Release 2012 |
|---|
 |
No map location |  |
Predicted Genes from contig_65209
| Gene ID | # CDS Predicted | Max CDS Length | Probes in Cluster | FPKM by Treatment | FPKM by Replicate | Top Rice Hit |
|---|
| MLOC_74130 |
1 |
353 bp |
None |
Available |
Available |
None |
| MLOC_74131 |
13 |
3417 bp |
MLOC_74131.1 |
Available |
Available |
LOC_Os06g48620.1, FRAME:-2, EVALUE:0.0, 13106.m05171 protein 4-amino-4-deoxychorismate synthase, putative, expressed |
| MLOC_74149 |
3 |
3529 bp |
MLOC_74149.3 |
Available |
Available |
LOC_Os07g36690.1, FRAME:+3, EVALUE:0.0, 13107.m03766 protein CSLF2 - cellulose synthase-like family F; beta1,3;1,4 glucan synthase, expressed |
CDS Structure of MLOC_74130
CDS Structure of MLOC_74131
CDS Structure of MLOC_74149
Contig Sequence (9382 bp)
>contig_65209 9382 assembly3_WGSMorex_rbca.fasta
GAGGGAGGGGTGCCGCCCGCGGGGACAGATCCGGGGGCGTTCGCGGAGTGGGAATGGAGC
AGCGGGGAGGAACTAGACCGGGCCGAGGGGAGGGGCGACGGCGGCAAGGCGGTGGCACAG
GGGAACCCTAGGGAGCAGAGAGACCGAGAGGTGAGAGGCTCGCGCGGTGCGAGCTAGGTG
CCGGACAAGCTTGCATCAGTTTTTTTTCTCTCGGTGGCAATTCGGCCGTAAATAACACCA
ACCGATACTTGCGGGAAGCTCCGGGAAGCCACCCGCGAGCAGCTTTTTCTCATTGCACTT
GCCTGGGAGGTGAAAATAAGCTGAGGTAACTTTTTCTAAACCAGTTCTTTTCAGCTTCAG
CTTCTGGCTTATTTTGACAATAAGCTGTAAAAAGCTACAAAAGAACTGGCCTTTAGAGCA
CTTCACACTCTGAAGAGCTGCCTATCGTTCGGTTTAGGGCCAGTTCAAGAATCCCTCCGC
CCCACAACTCCACTCCTGCGCTGCCCGTTCACCTTGAAGGAGCAGAGTAGTTCTTGTCCA
GATAGAGGAGGTATACACAGACACAGCTGCCTGGTTTGAAACGACAGGATAACAGGGAAC
CATGCATGTTAAGAATTAGACTTATGTGAACACTGACGTTGCATGAAGCTGATGTAGACA
GTGGGCATGTTAAGAGAATTGGTAATAGTAAGGATCAACTTCTTAAGTAAGATTACAACA
GGGGGGAAACCAACACTACATCGTCCCCAAAAAGAATAGCTATCAGTGCGCATTACCACT
GGTTTAATTCTTGGGGGGAAACGAAATAATGTATGCCAAAATTTGATTTGCCTGTATATT
CTAGTCAATGCTACTACTAGGCCACCAACATGAAATCTTCACTTCCGGCTTTTCCTCTAA
AAAACAAAAAAAAAATTCCCTTTCAAGCACCCTCTTGTTCACCAATGATTTTCAGCCCAC
CCTCCTTCTGCCAAAGGCCAACCGCAGCAGAGATGATGAGCTTACCTTGTCAGGCCAAAA
TCCATGCTTGTTGATGTCCGCTGAACCTTGCCACGCTGGTTTAGTTTCAGAGAGCTGCTT
CTAGCTTATAGTTGTCCGCACCGAATCCGATCGGTCCGGACTGCTGTGCGCCGCCGCTTG
TTGGCTGCACTCTTCGACGACCCTCGTCGGCGTCCTCGCCTTGAGCATCATCTCGGCGTA
CTCCGCCTCCGGGTCTGACAGCGCCACAATCGCCCCGCCTGCTCCGACCGAGGCCACCCC
GTCGTGCAGCACTACCGTCCTGATCACGATGTTCAGATCGAACGTGCGGTTGTACGAGAA
GAACCCGATCGACCCCGAGTATATTCCCCTTGGGCTGCTCTCCAACGCGTCGAGGATCTC
CATCGACCTGACCTTCGGGGCACCCGTCATCGAGCCTCCTGGAAAGGCGGCTTTGATGCA
GTCTACCGGGCTTAGATCAGGCTTCTTTGTTCCGCGGATGGTGCTCACCATGGTGTGAAC
AGATTTATATGATTCAACGTCCATGAGGCGAGGAACATGCACGCTCCCAGGCTCGCAGAC
CTTACCCAGATCATTTCTTAAGAGATCAACAATCATCAAGTTCTCAGCCTGGTCCTTTTC
ACTGGTGAACAAATGCAGAACAAAAAACAGTATCAGCACTGTGACATCCCAGTTCAAAAG
TTTGCAGGAATAATAATCAACAAATCTACATGACAGTGATACTGAACAGCCAAGAGGACA
TGTCATTTTTTATGATAAAACTGTGATACATCGCGATGTCAAATATTAAATATTTTCAGC
AAGCGTAGATTTTTACTCTGCGGGCTATTGGATTTTTTTTTGGAAATCAAAGGGTCTAAT
CATTCACAAAGCAAATTAACCCCAAAGAAAATCTGGTAAACAACCTAACTAAAAATCTGA
CAGTAACAATAATGATTGAGTAGCCCATTAAAATAGATCAGCAGCAAAAGAAACTAGATC
TCCCAAGTTTAATATCTCCAAAGGGATGCTTGAAAAAGACGTCTGAATTATGAAAGAAAA
TATATATATATTGCGCATACTTGCCTGTATTTCAGTTGCAAACGTAGACACTCATCTTCC
TCTGGTGTTCTGCCACGTGCTATTGTACCTTTGATTGGTTTTGCCTCTAGAATTGCATTT
CGATCTAGTCGCAGAAACCTTTCAGGAGAAGAGCAGCATATACTCAGGTTTTCTGAGGAG
AAGTTAAGCCAAGCTGCATATGGGCCTGGATTTTGTTTTCTCAATTTAAGGTACAGTTGC
AGGGCATTCATATACTCTACCCCTCTCCTCATCCGAGTAGTTAGGCACAACTCATAACTT
TCTCCATCTCTGATATAATCCAGGCAACTTTGAACATCCTTAATGTATTGCTCCTTTGTT
TTTTCTACGACAAAACTTTGCTTATTCAAATTGGATGATCCAATAATTGACTTTCCATTA
ACTCCTGGTGACATAGCAGCCATCCTGAGAAGCCTCTTCTCAGTCTCCAGCAACCATGAA
GTATGTGTTTTATTATGGTGCATTCCATTTCCATTACTCAAAGAATATTCGTCATATAAC
GACAGAATATATACATCACCATTGTTGTGATCGATCGCCACAAGGTTATCAGCAAAGAAG
AAGCATGCATCAGGAGTACTTGATTTAGCTTTGTTAAATGATGCATCACATTCGACCTTA
AGACCATACCTGGTTTCAAAGGAAAGCTGTCGAGTCAGAGAAGAGCGAAGAGAGGTTTTA
AAATACAAAAACACTAAAGAAATCACGGAAGACAGATATGAGAATGAGTGAAGCAAAAGA
CTAATAACATGATCTCTTAAGAAGTACCCAACTGCAGGCAGGAAAACAGTTTAATATTAA
GCATATGATGAAGCCACGATAACAAATCTACCTACCCTAGATATCCAACAAATCCACCAT
GGAAGTCAAATGGCAGCCCTTCAAAGTCCTCTTCATTGTATTTAATGGACTGGATCTCCT
GCAAAATGTGAAACAGTGAGAAATTGGAGCTCACAAGTTAGATTCTGCTTTGCTGATAAG
CTCAAGGGTTAGGCATAGTACATGAGCTTAATACCAAATCAACCAACTTGAGAGTTCATC
AGTATATTAGGTACAGAATACAAAAGCTTTTGGTCAAGGACAATGCTACATCCTGAGATG
TCTATCAATGGGTTGTGTTGACACATCTCCAATACCAATCAAGCACTCATGTTCAGTTTT
GTAGAACACTTCTAGTTCCTTGCTAATTTGTATCCAGCCTCACATTTGCTTAATTATTGT
GATGTGCTGTGCGGGCAGAGAAACTCAAGTACACCATTTCAACTTATACCTTGTGAAGGA
ATTCCAAGAAGCCATCTTTAAGAGAGTTTTTCACAGCAGATCCATGAGCACCTCGAATAG
TAATGGTTCCTCCACAGTTGGCTCTGCAAGAGATCCATGTTAACATAAGATTTATGACAT
ATGAAAATGCACTAAATATTTTTGCTTGTGTTTTGAGTGCCTTCCTACCTTTGACTGGAG
AGGTGAAACGTCATTTGCTTCCACAGAGGTCCGCCCTTACCTCCCATAAATGAAAAGCGT
GCCCTGTTCTGCAAGAAGCAATAGCTCAGAACGAGAAGATGATGATCATTTAACTAAAAA
ACAGAAAAAATGAATCGTCAATCAGGGAGGCTAGTACATTTCTAATTCCCTGACTCAGCT
ACAAACTGATTCCAACTTAATTCACGTAGATGAAAACAAATATTATCCACATTTATTCTG
ATCATTTCATCTCCTAGAGTGAAAGCAAGGTTTGTTTTTAAACAGGCTCGAGTCAGACAA
AACGTAAATGGTTAAGCTTTATGCATCTTTTGTTGTTTATGCAGTAAATCTGCATGTCAA
CGAACATTTAATTAGTTGTAATAACATAAAATTGTATCCTCGTCAAGCTTCACTTACATC
AGATGAAATCCACACAGTAAAGTAACTGGATGATCAATCAAGAGTAAGCTGATTTGGCAC
CTGATCAACTGACGAGCTATCCAGCCAAAATGTATCTTCAGCATTTTGATGACCAAAAAG
CTCCGAGAAAATGTCTTCAGAGCCACCTGTGCAGCTAAGAAAGTTATCAATCCTCTTCCA
TCTCAACCGTAAATATTTTTTCTCGCTGTTTCTCTCTTTAAGCATGTGAACCCGAACAGA
ATCATCAAGCTCTAGTCCATCAGTGTGCGACAAACCCTTCAGGACATAATTGCATTGATC
TGCAGAATTGACCTGCCGGCCAATTAGAAAGTCAACTACGATGGAGTATGAAGGGTATGC
ACAGGAAATATTTAGTCGTATATGGTACTTGAGGGCTTTCCAGTTTACCAATACTGTGAA
CCTTTCTTTCCTGAAACAAGGACGATTGTGATCCAAAATCAGTTGTTATCCTCTTAAAGT
TCTGAAAAATCTGTCTTCCGTAATGAGTAGCAACACTCTCTGGATGGAACTGAAATTAAA
GGCAATCAATTGTAAGAAGAAAAAACAACAATTTAAGAGGAAAAATGAAACAGAAGTAGC
CAGTATACCTGCACTCCATAATGAGGCATGCTGGAATGTTTGATGCCCATGACAATCTTG
TAGCCGTCGGGCTTACTAGCATTGTTTATGGTAATTGGAACTTCACAATTGTTAGTGTGC
CCTGAAGGGTCTGTTGTGGCAAAGTTATTCAATGATCCCCAGAATGAAGTGTTGTCCGGC
TGATCGCTATCAAGGAAAGATAGCATTCTGGGAGAAGCAGTCCATGCTATTGATACAAGA
TCCTGAGGCAGTGAGCTTGCTTCTATTACAAGTGAATGGTAGCGCACTACCTAAAAATAG
CATCAGTAAGTACAATGCTTTTTGCTGCGCAAGTGGAAAGTGAAGACTGACACACAAATG
GTACAGGGCTTGGTAACTTCAGTGGCACACTAACCTTGAACCCAGAGTTTATACCTGATG
GGATATGATTAAAGAGGTAGCATCCATTATGTTCGATTTCACTGATTTAGGAAAGATATA
TGTCAGGCCATGTGTTAACCATAAGAGCAGCTAGAACTTGCTAACAAAAGGGGTTTGCAT
GGATCAGAAAGCTGAAAGTACATATTAGCGCGCCGAAGAGTTCAAGGTCTTACCTAAGTC
GTCCATGTATAGCTTCAGGAGCATGAACAATCTTAGCGCCATGAACTAGTCCCAAGGCCT
GCACCGATCAAACACAACATCCTTGTCAGGCCAAAATGCCATCACACGGTCCTTATTTAG
TCCTTATTTAAAATACTGATCCATGAACAAGTTTACAAGGACAAACATTATTGTTTCACC
TGGTGGCCAAGGCAGACACCCAGGATGGGTATATCTCCGCACTCGCAAAGTATCCGCAGA
CATACACCTGAAAAACAACACATGTATATACCATCATTCTTTGACAAATACAAGTGTAGC
AACTGAATTATAATTGGTGCATAGTCCTCACCTATGTCGCTAGGACACGCCGGAGATCCA
GGCCCCGGCGAGATCACGATGTTGTCGAAGGCCCTCTTCTTGTACACCCAGTTGTAAACA
TCCTTCCACGCCCACTCGTCGTTACGCACCACCACAGGCGGCACTGCAAATACATACGAC
CGTCAGGGCACCATCCAGCAAGCAGTAGAAAGGCGTGATTTCTCTCAAGCCAGGCCAACA
ATCAACCAACTCAACCCATGGACATTGCGGGGGGGAAGCTACAAAGAGACTAGTCTGTTA
ATGTGATCCTTGTTGTAATCTAGACTCTGTTAATGTGATCCAACTCCTCGTGTGTCGTGG
CATGGGGAGTTGGCAGTAGGCTGCATCCGTCGCAGCAGGTGGTGAACAGTATAGCGTGAA
CTGGAGTTACTGCCAACACACTCGTCGGTGGCGGAGCTAGATCAACGGGAAGATGCTTCT
AGCGTGTTCATCGAGAGAGGGAGAGGGAGGCGGGGTTGGTGGGGCGGCTCACCGCCGTTG
ACGACTGAGAGCTCCTGGAAGATGTTGTAGGTGTAGCTGTCGTAGTTGTCGATGAGGAGC
GTCCTCACCGGCGGCCCCTCCGGGCCCTCCTTCCCGCCGGCCCGCAGCGCCGCGGGACGC
CTGGCGCCGCCACGGCACGGGGGTTGCTGCCACCGCGCGGAGGACGGCTGCGGCGGGGAC
CACCTCGCCGTCGGCGGGGCGGGGAGGCGGAGCGCGGCCATCTCTATCCCTCGGCGGGAC
GGATGCGGGAGATCAGAGGAGAGGAGAGGAGAGGAGGGAGGGAAAAGAAGGGAGAAAAGG
CGGCTCACTTTTTCTGGGGCGGTGGTTCGCTCGCTGCCGGTGCGGAAATTTATTTATGAA
CGAATGAAATCTTTTGTGCTATCGTATCGTATTGGCGGCTGTGCCCCAGTGCCGTCCCTG
CCACCACCAGCCATCCGCGGCCCACTGCGGTCGGCGGGAGGTCATGGGCTGATGCTGGGT
GGGGGTTGGTGAGGCTAAATTTGATGTTTTGGTCGTTATGTTGAAGTAAATCAAGATCTG
ATCTTCGGTTGTAAAAATTTCAGGATCTGATGCTTTTCCTACCCGTCAAGTCTCACGACG
GTAGGATATAACAACCTACTGTTAAGGTCTCTGACGGTAGGATTACACGTCCTATCGCAA
AAAAAATTGTACGCACATACCCTACCGTCAGGCATCTTGACGATAGGGTTGCATATGCTA
CTGTTAGCATGTGTTACGGCATGGATGCACTGCATTAACGTTGCCCCTTTTCCTATCGTC
AGGGACCTTGGCGGTAGGCTGTTATACCTTGTTGACATGGGACCTGACGGTAGGAAAATG
GTCACATCCCGAATTTCTTAACGAGGGTCGAATCTCATTCTACTTCATTAAAAAGGTCAG
AACAAAAAAAAATCATGGACGCCAAACTTTGCAAAACTTGAGTTCAGATATAAAGTCGAA
CGAGAGGGGTCGGCTGGTGATGACCAGAATTGACTGTGTCCTTGTGTCCGTGGATTGGGA
GCTAAATTTCTTGGACATTTTGCTCCATACCCTTTCTACTAACATCTTGGATCATGCACC
GCCACATTGACTACAACTGCTCTGTTTTGCTTGAAAAGGAGGTTTTGTTTCGAAATGTAC
TGGACTAAGCTCGAGGGTTGTGAGCAGGCCGTGCGGGACGCATGGGTTTGTGACGATAGC
ATCGTCAACCCTTACAAAAGAATGGACACCTTGCTGAGGGACACCGTGAGTGAGCTACAG
GCTTGGGGATAGAGGAAGACCGGCAACACCATAGTCCAAATGGCTATCGCGAACTATGTG
ATCAGGAGACTTGACCTAGCTATGGAGGTCCGGGCGCTCTATTTGATGGAGCAATGGTTG
AGAGGAACCTTGAAGCAAGCCTTGTTGGGGCTAGTTTCCCTTAAATGCACGATTGAAATA
CAACAATCTAGATTATGGTGGATTAGGGAAGGGGATGCTAACACCAATCTCTTTCAAGCG
GTGGCAATTAGTCGAAAGTCGAAAAATGTCATCCCTCACATTAGGCACAATGGAGAGTTG
ATCACGGAGCAGGATAGGAAAAATGAGATATTTACGGAGGCTTATGACCATTTGTTGGGA
TGCGCGACTGCGAGGGAGGCGGACTTGGACCTAGACTTCCTGGAGATGGAGGCACAAGAT
CTGTCGGACTTGGAGAACATGTTTACACAGGAGGAAGTTTGGGAAACGATCAAGGAGCTG
CCACCGGATCATGCGCCGAGCCCGGATGGGTTCAACACAGCTTTCTACCAGCGTGCCTGG
CCCATTATCAAGGACGATGCCATGCCCATGATGATGATGTTAGACATGAGATATTATAGG
GATATTGCGTGTTGTAACTCCTTCATGTTTAACTTTCTATCCCTATATCTCTCATGTAAT
ATCTCTAGTTGGTTACATCTCCAAACCGACTACACCTTAATATAAACCCTCGGCTCTCCT
GTTGGAGAGATACGACGCTTCATATCTTCGTATATGGTATACAGAGCAGGCCCTTCCATC
TCGTCTAGCTAATATCCATCGACCTCCCACCACCTCCCTCCCACCATGTCGTCCTCCGCC
GTCCCCATCACCTCCGGCCTCAACTACAACACCTCTGAGCCCCTCTCTAGGACGAACTAT
GTCCTTTGGAGAGCTCAAGCACGATCCCAGATAATGGGCGCCGGCTTGTTCGGCTATATT
GATCAAACCCTAGAAGAGCCTCCCAAAAACATCTCCACCAAAGACAAAGATGGCAAGGAC
CAGGTTGTTCCAAACCCTGCCTATGCCCCCTGGTTGATCCAGGATCAACAGATCGTCGCC
TATCTTCTTCGCAACCTGTCCAAAGAAGTGCTTGTCCAAGTCGCTTCCCTTGAATCTTCA
CATGCGATATGGGCTGCCCTAGCAGCTATGTTCTCCGTCGTCTCCCTGTCTCGTGTCAAC
AACATCCGATCTGCGCTCACCAACGCCCAGAAAGACACTCAGTCGGCCTCGGCATACTTC
GGGCATATGCGCTCTCTCTCTGATGAGCTCGCGGCAGCGGACAAACCACTCGGGGAGGGG
GAGCTCATCTCCTTCATCGTCGCGGGTCTGGACATGGACTACCAGCCCATCATCTCCGCC
CTCGACGTCCGCACTGAGCCTGTCACCATCGATGCACTTTTCTCCCTCGTGGCGAATTTC
GATCAGTGGATCGAGATGTTCCACGGCGGTGGCGCCGGTGGCTTCAAGTCATCTGCTAAC
GCGGCCTCTCGGGGTCGATCAAATGCCGGCAGGGGTGGCTACTGCAACCAGAAGGGCAAT
GGTGGCGGTGGTCCTCGCGACAACGGCGGCGGCTATGGCGCCCCTGGTGGCGGCAATTAT
GGCTCGGGTGGTGGCAATCACAACGGTGGTGGCGGCGGCTATCACCAAGGTGGCGGTTCT
GGTGGTCCTTACCATCAGAACAATGGAGGAAGAGGAGGCTATGGTAGCAGTGGTGAAGGC
CACTATCACCAGAACTCCTTGGCTGGCGGCAACAACACTCGGCGCCCTCCCAACAACAAC
AACAACAACAACAGGGGGCGCCCCTTTCAAGGGTATGACGGCTATGAGGGATGTTGCCAA
ATCTGTAAGAAATCCAATCATATTGCCAAGGACTGCGATTGGCACTATACCGATGATCCT
AATTCCCAAAGCAAGAAAATTGCAGCCGCAGCAGATGTATCCTATGGTGTTGATACCAAC
TGGTATATGGACACGGGCGCCACAAACCATATCACTGGTGAGTTAGAGAAGTTGCCAATG
CCCGAAAAGTATCGTGGCCATGATCAAGTCTACACTGCCGCTAATGGTAGAGGTATGGAG
ATAATGTTGGGGAACGTCGCAT
