Contig Data
morexGenes
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Map Locations of contig_65202 (5144 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_65202

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_74127 7 1443 bp MLOC_74127.3 Available Available LOC_Os03g18680.1, FRAME:+3, EVALUE:2e-45, 13103.m02237 protein membrane associated DUF588 domain containing protein, putative, expressed
MLOC_74128 1 485 bp None Available Available None





CDS Structure of MLOC_74127






CDS Structure of MLOC_74128






Contig Sequence (5144 bp)

>contig_65202 5144 assembly3_WGSMorex_rbca.fasta
GGCCCGTGGCTTGTAATATGAAGCTTGTTTGTTTTATTTNNNNNNNNNNNNNTGTTGTGA
TATCTTTTCGTGAGTCCTTGAGTTTGATCGTACGCATTTGCATGCATGATTAGCGTATGA
TTAAATCGAGGACGTCACAAGCACCTCCTCCTTCACGTCCGGTACGACCACATTGCCTGT
CGCAGAGAGAGCCAGCATGGTGATCGTGCATGTTCTTGGAGTCTTCCAAGACACGTTGAA
TGAGCCGGACCTCCTCCTCCTCTGTCATGGGAGGTGGTGGTGGTGGCGACGGAGTACGCC
CGCGCACCCAGGGATATGCCCGCCGCAGGCTAGGTGGGCGGCCAACAAAATATGACGCGG
GGCCGCACGTCGTGCTCGTCCCGAAACAATTGTCCCACAATGGGGAATCGACGGCGTACC
TGGGTCGTAGTGCATGTCGTCAGACAGGCAACGACAACAGTGGTCGATCTCCTCGCTGTT
CGTCTGGACCCAAATTGTACGCATATTTGCGTTTGAAATGGATTGGGCCGGACACAAAAC
GAATAAGATGGATTCAGACCATCGCGCGCTGACTCGTGAGGTTTGTCTGTTTTGCTTCAA
ACGGACATGACCGAATGAGACGGGTCGTGTGGTGGAGTTTTTTTTTTTTTTGGACAGGTG
GTGGAGTTGACCTTAGAAACGGAGGGAGTGGTATATTTCGATTGCTGGTCCGTCACTGGA
CCCCGAATAGAGCCTTGCCTGTCAACGATGGGTGTACTCAAACTACACTCCAGCTCCATG
TACCACAGCAGGAGTCCAACCCCACCTTTCACGTGACGAACGCACCCATAACTCACAGAC
TGAAGGGCCTGAGCACAACAAAGTAGCGACGGTTCAGTCTTTGACAAGAGGTGAAGAGGT
TTGCCGGCTAATCCCGTTCTTGCTTTCCCCTCAAGTGTTTTTCCAGCTTCATCACACACA
CAGCAAACACCTCAGTTCAGCTCTCCCCGTTCACCACTGGTCAGGCACTGTTCCACTGGT
GAGCGATGGCGATGGTCACGGCTGACGCCTCCGCCGCCGCCGACGCCGCCACGAAGCAGC
CAGACGTCGAAAAGGATTACAGCTCCTACAACGGCGCCTCCACCGCGGGAGCGGGCGGCG
GCGGCGTTGTGGAGTCGGTGGTGGCGCGGTGGAGGCGGGAGGACATGCTCGACAAGTGCC
CCCTCGCGCTGCACGCTGCCGCCGCCGCCTTCGCCTTCGTCGCGCTCGTGCTCGTCGCGT
CCAACCAGCACGGCGACTGGATGCAGTTCGACCGCTACCAGGAGTACATGTGCGCCGATT
TGATCTTGGCCGCCTAGGGCTGGTCTTCGATCCGGGACTCTTAAGCGTCTTACATGTGCT
GCGTTGTTGCTAGGTACCTGCTCGCAATCGCGGCGCTGGCCTTCGCCTACTCGCTGGCGC
AGGCGCTGCGGCACGCGCACCGGATGCGCGGCGGCGCCGACCCCATCCCCGCGCCGTCCG
CGAGGCTTTTCGATTTCATTGCTGATCAGGCGAGTTGCTTCGACCTGTTAGTTTGCACCT
GTTATCATTATTTCTCCTTGTTATTGTTATCTGATAAGAGTCCATGTGTTTTGTATCTCT
CAATTGGACCAATGTTTGCTGGTCAGGGAGGGGAAAGTAGGCAAATAAAGTGTGGCCGAA
GTTTACCGTGTTAAAGTAAGAGTGGCTACCGGGGAGTAGAGATTCCAATTCCATTTGTAA
AGGAGACATCAATCCACTAGTAGAGTAGCGACCGGGGAGTAGAGTACCTTTTCTTGTTTT
TGTTTTTTGTGGAATCCAAATGATAGGTACTGTATTGTTCTTGGATTGAGGCGTTTTAAC
TGTTAAGAGTAAGATTGGTCTATGGAAGCGTACACTCGGCAATGTTCTGGTTCAATACAT
AGCTACAATTTCACAAATTACAACCCATATCGCCCTTGTTTCTTTGTGGAAACAACTAGA
ATATGATACATGTAGCTCTCCATAATGGTCCAATAGTTCAATCTCTAGGACAACCCAGCA
ACAACCATCGCTGATAATGTTGTGGCGTTGGAATGGGGGGAGTAAAGTAGTTGGGGAGTG
GTTAGGGCCAGCCATGAGCTTCGATGTATGTTCTGAATCATTGGTTTGCTTGGAGCTTTG
GAAGAGTACAATACTAGATGACAAACAATAGTTCATGTTGTCCATTGCATATTGCTTAAA
TACAGATAAATTAATGTAATCGTGATCTTTCAAATGTTTTGGGACCACATTTACTTAGGA
TGCCCTGGAGGGTATGAATGTTTTAAACCCGTGCTGCTGCTACTTAATTAAGGTTTTTTA
TGAGCTTCTGCCTTCTGCAAAAAATATTTTTTTTTTAGAAAAGGAGGATTACCTCCGGCC
TCTGCATCAGCACGATGCATACGGCCCCTTTATTAAGCAAGCAAACAAAGTGTGGTTCAA
CAATATGATCCCATGTTAACCCTTAGATTTTCATGGCTTTGGATCCCATGTGAAGAAACA
ATGGAGTTCGTATTACTGGACCCCAATATGCTAATAATACTTACAAGTAGTTTTGCTGGA
ACTTGGCCCTTGTTAAATTTACTTTACCAGTGCAAATAGCTAAGTTTTATTAATTGATGA
AAGTATGAGTAATTATATGGCTAATCAGGAATGCTGCAGTCCACAAATTCTTACACGTGT
ATGCTTAAGGAAATTAGTTTTGGACCAAACATGTTTCCATGTTAACCCTTAGGTTTTCCG
GATAATGGCAAAACTGCTGTGATGGTTATATTTATCTCATGCTTTTGTTTTGTGCCATGG
TACCATGCTGAATGCAAGACAACAAAATAGTAGGATATTCTAAATTGAGTTAGCTTCCAA
AACTTGCATTGGACTTGCCTGTCAATTGTTGTGTTTCTTGAAAACATGTCAGACAAAATT
TCATAGCCATATGATGAAATTTATTGCCCCCCGCTAATAGAAACTGATGAACATATTCAC
AGGTAGTCGCATACTTGCTGATGTCTGCTCTATCCGCGGCTATCCCCATCACGAACCGCA
TGAGAACAGCAGTGATCAACAACTTCACTGACGCGACCGCTGCAGCCATCAGCATGGCAT
TCCTTGCATTTGTTGCCCTCGCCTTGTCAGCCACGGTTTCAGGCTACAAGCTCTCTAGGC
AAATGTACATGTGATGATGTGAATTCTCACTGTAAAAGAGTTAACTGCGAACATGAATCA
TTCATTTCAGAGAAGCAAAGTGTGTGGTGTCCCTCTTCTGCACGGATATGTTGTGCCGTA
GGGTGATTGGTGTTCATTGTTGGTAGCCACCACATTTGTACATAGGTTTACATCAGCATT
CCTTGATACTCCCTTCGTTCCAAAATTTAAGGTGCATCAGTCTTTTCATCAAAAGCCAAA
CATATGCATGTTTGACCAATTTTGTAGAGAAATATATATCAATATCTACAGTACCAATTT
TGTATCATTAGATCCATCACGAAAAGTATTTTTGTTTTGTTTTGCGGGTAAGTATTTTTA
TATTTTATTTATTTTGTATTATAGATGTTGATATTTTATTCTATAATCTTGGCCAAACAT
ACACAAGCTTGATTTGCATAAAAATCAATACATCTTATTCTGGAACGGAGGGGGTACAAT
GCTATTTTTTAAGTTATGTTTTTTCATTGTGACTCACAACATATTGCTGCTGTGAATCTG
TCATGCATAGGCTGGATATGCTGCGGAGGAGCCTCCTGAGGACCAGACTTTAACTCTGAA
CATGCCATGGGATCTAGTTTTGACGCCCTCGTCACAACTAACTCAAGGGTTATGAACTGG
GCCTATAGTTTTGAAGCCCTCCTCACGACTAACTTATGTTTTCTTTTTCTGGGTTTAAGT
TACAATGCATTAACATGTGGATTGCTGAACAAATCACAACTAGTCACCGACATTAAGAAG
TTACTCATTGTATTCCAAGATAATTGAAGTTCAAGAATTATCATAAGTAAAACTTCTTTT
AAAAATGTAAGTAGAACTTTATTAGTTTTGATCATGTCTATACAATATCTGTTAAGATCC
GCCTATATAAAATAGAGCTCTTTTATGGTACCCTACGTTAAATATTGGCCCGTCCATTGG
TGAAATCTAATGGTGGCAATTGATCTGTACTGCTCATGTTTGCCAGGAATCACACTAGCG
GTATAGCTTGCACATCTTTGCTCCGGTCCTTCGGTATACAAGTCAAAATTTCAGCCCACC
CAACTCGCCCTTGGAGGACTGGAACACCGCGGCGAGGCTAGCTGGGCCGGCAAGGTGCAG
CACCTATGAACCGCTGTCTACGCCTTCCGGACATCTCTTGCCACTCAATGCACGCTGCTC
TCTGGCGACGGCGGTTGGCCTCTTCCGTCAAGCGAGGCGACGCGAGGATGTGGGGTGCTT
GCGTGCGGGAGGCCGAAGCGAACGAGTAGACACTGCGGGCCTGCGGCGCGGGCACGTCTG
GTGTTGCCGCGGGCGTGGAGCACAAATGGGCGCATGCGTGGTTGGGTGTGTGCGTGCGGG
ACGAGCTCCAGGGACTTGTTTGTGGTGACTGGTGAGCAACAGCTCACCACAGGCTCAATG
TGATAGCCGAGGACGTAGCAGAGACCGTAAAGGAGCGAGTCGATGCCAGTGGTGGTCCTC
GGGTACAACGAAGAAGACGAGCTCGAAGCGGAGGTCGTGGTCGAGGACGACGGCTTAGGG
GGCGCCTTCTTCCAGCTACCGAAGCAGGAGGTCGAAGGAGAAGAGGGGGTCGTCATTATG
ATTTCGGTCGCCATTATCTGCCGCGACCACGTCACTAAGGTCCCATGATAATAGAGAACT
ATGTCTATCATATACTAATATACCGCTTCCTCCCTTGTTAGCAGTATAGATGAAATGATC
GATATAGTTGACTAGAGGGGGTGAATAGGCAACTACCAATTTTTAATTGTTCTTAACAAA
TTAGGGTTAGCAAAAAAAGTTTCTCTAGATAAACAACTAGGTGAGCAACTTATATGATGC
TAACAACAACTACAACTAATGCAAGCGAGAAATACAACACAACAATAGTAAGGACAAAGT
AAAGGTAAGAGATAACCACAAGTGAAACCAGTGGAGACGAGGAT