| Morex x Barke POPSEQ 2013 | Oregon Wolfe POPSEQ 2013 | Morex Genome Release 2012 |
|---|
 |
No map location |  |
Predicted Genes from contig_65070
| Gene ID | # CDS Predicted | Max CDS Length | Probes in Cluster | FPKM by Treatment | FPKM by Replicate | Top Rice Hit |
|---|
| MLOC_74054 |
1 |
290 bp |
None |
Available |
Available |
LOC_Os04g37780.1, FRAME:+1, EVALUE:1e-12, 13104.m03615 protein histone H3.3a, putative, expressed |
CDS Structure of MLOC_74054
Contig Sequence (4264 bp)
>contig_65070 4264 assembly3_WGSMorex_rbca.fasta
GTCGCATCTTGGGCGTGACATTAATGCTCGGTGGTGCTAGAGTAGTATTGGGATATGTAT
TTTGGTGACCGAATGTTGTTAGGGGTCCCAGATGAGATCCTCGACATCAGAGGAGCTTCA
GAATGATCCGAAGGTAAAGATTTACATATGCGAAGTCATATTTTGGCTACCGGAAAAGTT
TCGTGTTTTATCGGTATTGTACCAGAAAGCTTGTGGAAGGTTCCAGGGGGCTCTTGAGGA
GTGTGGAAAGGGCCCTCCAACCCATATGATGTCCATGGCTATAAGGGAGCGTACAAGCCT
GTTTGGGCCAGCCCCCAAGGGCCCATGCGGTTAGGGCGTAGGAAACCCTAAAGGGGAAGG
CACCTAGGAGGTACCTTGGGGTGGGAGGACTCCTCCCTCTTGGCCACCGGCCCCTCCCTT
GGAGGAGGGGTTAGTGCTGAGCCCCCCTACTGCCCCTTGCCTCCTATAAATAGTGGAGGG
GAGACGAGGGTTGAACATAACAAGTCCTCTCCCTTGAGGCAACCCTCTCCCTCCCGTCTC
TCCCGTTCTTCCTCGTTCGCGGTTTTCGGAGGCGCTTGGTGAAGCCCTAATGGTACTGCT
CCACCACCACCTCCACCATGCCATCCTGCTGGTCGAGATCCCATCCACTTCTCCGCCCTC
GCTTGCTGTATCGAGGAGGCGCAGATGTCATCGAGACGCACATGTGCTGAACACGACGGT
GTCGTCCGTTCGGCGCTAGATNNNNNNNNNTCACGATTGGATCGTGAAGACGTACGGCTA
CATCAACCGCTTATATACGCTTCCACTTAGCGATCTACAAGGGTATGTAAATACATTCCC
CCTCTCGTAGATGTTGATCTTCATAGAGTGGTCTTGATGAGCGTAGGAAATTTTATATTT
TCCATGCGATGTTCCGCAACAAATAGCTCATGGGTAAAGTAACACACCTCTATAGAGTAT
AAATACTTGTGCCTTGTCACTCTCTAATCTGTGAAGGATTTGTGAATGCGGCACGAAAGG
AGTCTATTGAAGATTCTAACAACCCTGAAGTCTGATGACTTAATGTTTTAAGTAAAACAT
GATGTTGTAGATATTTTCGGCAATCATTGTTGAGACCTATTAGGAATCAGGAGTAGCTAC
AATGCATCTCCACACCAGAATATATATGAACCCGTTGTGTACCTTATGTACTCATCCCTT
GATGTTTTATGCTTAACCATTGCTTTCGTGTTTCTCTTAGTTAGATTTTAGTTCGACAGT
AATATAGTTGATATTTCTGCTATGCTCTTAAATGAGCCTTAAGAGAATAATACACTGCTT
ATCTTTAGCCCGCTTACGGTTTGCACTTATGTGATAAACTATAGTCCCCAGAAATGTTAA
TGTGTACGTCCTCCCATTCCTCAATTAACCACTCCCTCCATTTCACAATGTAGTGTATAT
TTTTAAAACGGTTAAAACCTCACACACGTGACCAAGGTCGTGGAGAATATTTTTACATCT
AGAATGCCAAACATATAGTTCGTTGCTACGAATCACACAGATGGAAATCATCCGCCTAGC
CAACTGTACGATTAGCGTGTTAATGTCCGTTGGATCACAAGAACAGCACGACAACAACGA
GTGCGACAGCTTTAACGTATCGCCATTGTAGCTCCAGCAGAGCTCCAACGCAACACCGGG
GACGTCTGGTGAGCTCCATTGCAGCCCCGACAGAGCTCCAACGCAACACCAATGGCTCGA
GTGAAGGTCCATTGCAACTCCGACCGAGCTCCATTGCAGCCTCGGCGGCGTTTCAATGCA
ACACCAATTGCATGCTTATTTGGATCACACCTCGTATAATACTGCCACCGTTCCATAATG
AGTATATATAGATTTTTTGAAAATTCAAAATCTGCAAACTTTGACCTTGTTTATAAAAAA
CTATTTATATGTATAATACTATTTATTTATCCTTCAACTCCGATCGAACTTCATTGCAGC
CTCGGCGGCGTTTCAATGCAACACCAATTGTAGTATGTAACAACAAGCTTATTGAACATC
AATTTGAACTTGATAGGTGTGAGCCTCCGTCTCTACACTCCAGTATACAACCGGAGAGTA
CAATTGCATGCTTATTTGGATCACACCTATGTATCTCCTCTACATTGAGTGGACGCACCA
GAAAAATGAAGAGATGCATCTCGCATATGATGAAAGAACTCTCTAGATAAAGCATGTTAC
AAGAAGCTACTTTAGAACAATTGACCCTTTATATTGGTGTTTTCTCCACTCTACTAAGGG
TCTGCTTGGTTCTGATGTATTTTTATACACCTGTATTTATTTTATAGGTGTATAATACCG
GTCACACTTAACTAAAAAAAAAGCGGTCGATGAAGGTTTATATATTTTACAAGTGTATAA
CTCTCAAAAACGCCAATCCAATCAGGACAATGACACTAAACGGACACACTTACTATGCAA
TTGAAATGGGCCTTTAAGTTTTCATAATTTTAAATGGGCCGATATGCAAGGTTTGTAAAC
CGAGCCGATACCCATAAAATCTAATAGAAGGCACTTAGTCATCCTTTTTGGCTACAACAA
TTACGTGCAACAATAAAACACTAAAAACCCGTCGTTAGATTTCTAGGAATGGTAAATCTA
ATGTTTTTCTATGACAAATTATATTAACGCGATGATGTTAATATTAATTTGCAAGCATAA
AAATGTTTTCAAGGAAAAATAAACGGAAATAAATTTGTCGCTAACTAAATTTGTCATTCT
TGAAGAACATAACTTGACATGAAAAATCTTATATCTGCCATGATCGAACGTTAGATTTCT
AGCAAAGTCCTAACTTTTTTAATATATAGGATGCGTGGACGGCAAAGAACAAACGACCAC
ACCTTTTCTTTAGAGCATCTCCAACAACCGTGCGATATAAGCGCCGTGCTGGAAAAATGC
AGTTTCATGCGCACGCGCACCCGTTCCGGACGCTCGAGCGAAGGCGCAAAAAACACGCGC
GGGACGTAAATGGCTCGGTGCACGGGGCGAAACGACATCGCTCGCTCGCTCCCGCACGCT
TCACACTCGAGCGCACATGCCGCACCCTCTTTGGCCGCACCGCTTTCGCCCCGATGCGCC
GCCGTCGGCGAATTCGCGTGATGGTCTGTCACGCCGACATCCTCCTCACCCCTTCTTACA
CCTGCGACCCCTTCGCCGCCGTCGCCGGCGACGCAAACCATAGCACGGGGAGCTTTGGCT
TCGCCTTCGCCGGTGCTCCTCCAAGCACCGGCCTCGCGCGCGGCCTCTTCATGACGTCAC
AGACGACCTCGCGGGCGGGTGGCGTCCCGCGCGGCGCTCTCCGTGAAGCCACGTGCCCCC
CTCTCGAAGCTCCCAAATGCGGCGGTGGCGAAGACGGGCAAGGTGTACAGGAAGAAGAAC
AAAGTGGCGGACGACTCCTCTACGACCGAAGAAGAAATTTGCAGGGTGTGTGGATGCGAC
CTCGACCGAAGCGTCGATGAGCTCGCTTGTTGCGCCGGCTGCTATGCTATGCTATGTCTT
ATTTTGATGTTTGAAATATTATTATATTGTCTTTAAAATGAACATATTACAAACGTGGGC
TGTTCGCGCGCGCAATTGTTTGCAGCGGTAGCTGAAACTAGCGCTCGGCGGCTCGTAAAA
ATTGATTATTCCAACGCTTTAAATACTTTTTTAACGCATGCCTATTTTAGAGATGCTCTT
AGCAGTCCTAACTCGTTCGTTTCGTCTCCGGCCAACACTACAAATCGGCATCCTTTAAAA
TAAGAAAAAAATTCACGCAAAATTTCCTTAAAACACATGCAATGGAGAAAAAAAAAACTA
CTAGTACAATCAGCAACAGCAGTCCAGTCGCGTCTCACCTCCACGGTCCTCATGAATCAT
CTCCAACCAAATAAACCAATCAAAACGCGCGAACCACCTCCCCACGGATCACCCTCTCGA
AATCAGATCCTAACCGTCCACGAACCACACGTCCAACGCTCCACAGTCCGTTCCGGAAAA
CCAAAACCCACGCGCGCGCCCAGCTCCAATCGCCCGCCCGCTCCCCGGAGGAGTATTATT
TAACACCGTCCCATACCCTTCTTCCTCACTTCTCCAATCCAATCTCCCTGCCCTAACCTC
CGACCTTCTCCTCCTCCCGGCGCACCGACGACATGGCCCGCACGAAGCAGACGGCGAGGA
AGTCCACCGGCGGCAAGGCGCCGAGGAAGCAGCTGGCCACCAAGGCCGCCCGCAAGTCCG
CCCC
