Contig Data
morexGenes
Links



Map Locations of contig_65035 (4102 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_65035

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_74048 5 1798 bp MLOC_74048.1 Available Available LOC_Os11g39990.1, FRAME:+1, EVALUE:0.0, 13111.m03952 protein patatin, putative, expressed





CDS Structure of MLOC_74048






Contig Sequence (4102 bp)

>contig_65035 4102 assembly3_WGSMorex_rbca.fasta
GACATGATGCCATGCATGATGCAATGATGCAAACTAAATAACGATGCAACAAACGAAAAA
TAACCACACGACGGAAANNNNNNNNAAGGGGGATCTTCTGGAACGTCAGTCTCGGGCTGT
CACAAAGTCCCTCAAGATGCATCTGTTGGAAGTGACCAAACAGTAAACACCTATTGGCAA
CGCACCAAGGATTACTTCGATGAGCACAACACAAGTGTTCACTTACGTTCGAGCGACTCT
CTTCGCCAACATTGGTCCACCATCAACGTTGAATGCCAAAAGTGGGACTGTTGCTTGTCA
AATGTTGCTCGCATGAACCCATGTGGTTGCGGTGATATTGACTTGGTAAATATTTCCTCT
TCATGCGTGCTTTCTCAAATATTGGATTGTTCCACATTTTGATGATGACGTGTTGGTTGT
TTTATTGTAGAAAATGATTGCGCAAGGATTTTTTCAAGAGAGGAACATGAAAAGCGAGAA
GAAGAAGAAAGGAAAAGCTCTCACTTTTCATCGTTGCTACAAAGAGCTCAAGGATGAGGA
GAAGTAAAAAACTAGAGAGATTTTTTATGCTTCGAAGAAGAAGAGTGTGGTGATTGAGGA
TGAAAAAGATGTCGCCGGTGAGGAGAGAAGGCGCCCACCTCCTCACTCCGCGACAAAATC
TTATAGGCCCAATGAAAGCAAGAAAGTGAAGGGAGCTAAGGCCGGAGACAATGATCTCAA
GGAAGGATTTGATGCCATTGTCATGGCGAGAAAAGTGTACGCCGAAGAAAAAAGAATGTT
GAAGCTCAAGGAAATAGAGGAGAAGAGTGAGGCCGAGGCAGCGGCCGAGGAGAAGAGGGC
GGCAGCAAAGGATATGAAGGTGGACCTAGCTGAGAAAAAGGCCGCGGTCGAGGAGATGAA
GATGATTGAGGAGAAGGCACTCAAGTTTATGTCTATGGACACATCTACTCCTGATCCCAG
GGTAAAGGCCTATGTTAAACTTTGTCGCGGTGAAATGCTCGTGAAGAAGCAAATGCTCAT
GAGGCAAATGATGATGGGAGGAGGCATGGGAGGTGCCATGGGTGGCTACATGAACATGAT
GGGAGGTGCCATGGATGGCTACATGAACATGATGGAAGGTGCCATGAATTATGCATTTGG
CAGAAACATGGGAGGTGGCTTCGGTGGCAACATGGAAGGTGGCTTTGGTGGCATGGGAGG
TGGCTTCAGAGGCAATATGACCGGCATGGGGGTGGCTTTGACGGCAACATGATGGGTGGC
TTCTGTGATGCTCCCGGCAAGAAGACTTCGCCGCTTCACAATGTTACCGCGGTTCACAAT
GTCGGTAGTGTTGATGACCATAATGAATGATATTCATGTCCATTTTAGTTTGCAGGGTGA
AAAACTTTGATTGGGATGATGCATTTTTGGTAGAGGGATTTGAAACTATGATGATGATGA
TGCATTTTTGTTAGGATTTGAAACTATGATGACGATGCACTTTAATTTGAAATTTGAAGT
GATATTTCAATGCAAAACCGTGGCTATACAACGGCTGAACAAGCCGCGCGACTCGCGGTC
AGTTTTACATCTTCGTTTGGACCGTCCGTTGGAGTTGCTCTTTTACATCTTCGTTCTGTT
TCATCTATTGGAGTTGAGTGTTTTTTTGAAAATGTAAAAACCATTTTTTGATGCTCTAAA
TTTTTACATTCTCGGTTTAAAGCACCAAAATATACATCATCTATTATTGGAGATGCTCTA
ACGGTGGTTCTCAGTACGGTCGAAGATGTCATGATTCTCAATGGCTAACTTTTGAAGAAA
AGCTGAACCGAGCAAGCATCGTCGGCGCGCCAATAATTGAATCATGCCGCTGTGAAATGT
GAATAATGTGTCGCTGAAGCTCCACCTACCGCTGTCTATCGACCCATACGGCAATCAGGG
ACTCCGGCAGTCCCGCCCGGGCAAACGTGACACACGCGCACCACAATAAAGTAAGTGAGG
TAGAAAGATTCAATCTTAGCTACTGACGCTAAATTTCAAGTTTAAATAGCTCGGTAGCCG
GCAGAGGCTGCAGATCCGAAAGCGCGAGGACACACGAGCGAGCTACACGAGCAGGAGCAC
GAGCAGTGCTCGCCCGGGAAATCTTGTTATTCGAACCAGAGGCCGTTGCTAGCCGGCAGC
ACTAGCCAAAGCTCGAGCAGTGAGAGGGAGCTAAGCTAACCATGTGCAGCCATGGCCATG
CGCCGACGTGCGTCACCTGCCCGCCCCCGTCGCAGGGGCAGCTCATCACGGTGCTCAGCA
TCGACGGCGGCGGCATCCGCGGCCTCATCCCCTCCACCATCCTCGCCTGCCTCGAGTCCA
AGCTCCAGGTACGTCGTCCCTCTGCGCCTCCATTGTAGTGTTCTCATTGAAGGCCGTCTT
CGTCTTCGTCTTCGTCTTCGTCATCCTATATTGGTTGATTGATTGTGATGTGTGTTGTGT
TTGACTTGACAGGAGCTGGACGGGCCGGACGCGCGCATCGCGGACTACTTCGACGTGATC
GCCGGGACGAGCACCGGCGCGCTGGTCGCGTCCATGCTGGCGGCCCCCGGCGAGAACAAG
CGGCCGCTCTTCCAGGCCAAGGACATCAACAAGTTTTACCTCGACAACGGGCCCAAGATA
TTCCCACAGAGGAGGTACGTACGCACGCACTCACTCACTCACTCACTCACTCACTCACGC
ACGTCTTCTTCTCTTCTACTTCCGGCGAACCCTGTCGTCGGCGGCGATGTCGATGTTGAT
GTCGGCGTTGCTTCACGTGCAGCTGGGGATTCCTGACCCCAATCGGGAACCTGTTCGGCG
CCGTGAACGGTCCCAAGTACGACGGCAAGTTCCTGCACGACAAGATCAAGAGCCTCACCC
ACGACGTCACCATCGCCCAGACCGTCACCAACATCATCGTCCCCACCTTCGACATCAAGT
TCCTGCAACCCGTCATCTTCAACACGTACGAGGCCAGGGTGGACCCGCTCAAGAACGCGC
ACCTCTCCGACATCTGCATCAGCACCTCCGCCGCGCCCACCTACTTCCCCGCGCACTACT
TCACCACCCACGACCCCGCCGGGAACCTCTCCGACCGCGAGTACCACCTCATCGACGGCG
GCGTGGCCGCCAACAACCCCACCATGGCCGCCATGTCCATGATCACCAAGGAGGTGCTGC
GCCGCAACCCCGACTTCACGCACGGCAAGCCCGCCGATTACAACAACTACCTCATCATCT
CCATCGGCACCGGGTCCGCCAAGCAGGCCGAGAAGTACACCGCGCCCGAGTGCGCCAAGT
GGGGCGTCCTCCGCTGGCTCTACGACGGCGGCTTCACCCCGCTCATCGACGTCTTCTCCC
ATGCTAGCGCCGACATGGTCGACATCCACGCCGCCGTCCTATTTGAGGCCCTCCGCATTG
AGGAGAACTACCTGCGCATCCAGGACGACTCGCTCACGGGGCAAACGTCCTCGGTGGATA
TCGCCACCAAAGAGAACATGGAGGCGCTTATTGGGATCGGTAAGAATCTGCTCACCAAGA
CCGTATCCCGGGTAAACATTGACAATGGGATGTATGAGACCGTCGACGGTGCTGGCACCA
ATGAAGAGGCGCTCGTCCGCTTCGCCAAGAGGCTCTCCGAGGAGCGCAAGCTGCGCCAAA
CCAACCTCAACTCCAAGTAGAGAAGAGAAGAGAGACGAAGAAGCACTACCTACAATGCTT
AGGGATGCAACCAGATGCGTAAAGGATTCGTTACTTTAATAATTATGATTTATGATTGTT
TTAGTTATGCTTTCGCGGATAAACGGAAATAAAAATGTATGTTTTTTTCATGGTAATAAA
GATGTATGTTGTCCACTTGCATCCAAGCTATGCTAATTTAGACTTGTACTTTCTTTGATT
CAAAATAAACTCCACGGTTTTGAACTACTAGGATTGAATGTGGGCGACTAATTATTATTT
TTGAAATAAAAACATGAGTTGTGGCTAGTACCGCCTCTAAATTCTTTTTTTAAAACTATC
GAGACAAATGAACGGTGCAGATTAAAACTTAAAACACTGGTGGAAAAAGGGCCTTTGGTC
GCGGTTCGCAACTGCCATTAGT