| Morex x Barke POPSEQ 2013 | Oregon Wolfe POPSEQ 2013 | Morex Genome Release 2012 |
|---|
 |
No map location | No map location |
Predicted Genes from contig_64931
| Gene ID | # CDS Predicted | Max CDS Length | Probes in Cluster | FPKM by Treatment | FPKM by Replicate | Top Rice Hit |
|---|
| MLOC_74009 |
4 |
3861 bp |
MLOC_74009.4 |
Available |
Available |
LOC_Os01g60000.1, FRAME:+3, EVALUE:0.0, 13101.m06382 protein pentatricopeptide, putative, expressed |
| MLOC_74010 |
1 |
920 bp |
MLOC_74010.1 |
Available |
Available |
LOC_Os01g59990.2, FRAME:-2, EVALUE:1e-63, 13101.m14961 protein ribosomal protein L24, putative, expressed |
CDS Structure of MLOC_74009
CDS Structure of MLOC_74010
Contig Sequence (9759 bp)
>contig_64931 9759 assembly3_WGSMorex_rbca.fasta
GGTCCGGGAAGGAGAACGGGTCGTCGTCATCCTCCCCCTCGCTGCCCTCGCCGCCGCCGG
CCGGCTCCCGCGCGGTGGAGAGCCGCGGGGCGTTGGGCGGGAGGAGAGGCCGTCTCCTCG
GCGGAAGGCTGGAGAATCCGGGGCCGGAGAGGCGCGCGATCGCTCCGGCGAGGACCCTGC
GCAACATCGAGGAGGGGCGAAGAGTGAGGATCGGGCGGCGAGTTGCCTCGTGTCAACTGC
CGACAGAGCAACGTAGCACGCCCGGGAAGGGCAAGCAAAAAAACACGATCTTTTTGTCTC
GGACGCTGGCGCGGGAGGGAGAAAGCCTCGGACGATTTCGAGCCGAGCCGAGCCTCCTCC
GCCTTCTCTCTAGACAAGGTATGCGCCCTCTCTCTCTCTCTCTCTCTCTCCATTGCGCCG
TGACATATTCTAAGTACTAGATGAGAGAGGCGTTGGCCGTTGGGTAGGGCTGGGCTGGAG
AAGACGGAGCACCCCTCATGGCGCGGTTCCCGGCTGACGTCTTGAGGCAGGGATGCCGAC
CCTCCCATGATGCCGCGGCCGCAGACGCTCACGTCCGGGGCCTGGTGGCCCTTCTCCTGA
GGCACCAGGCGGAGAGGCGCCCTCTCCTCCAGATCCATGCCCAGCTCGTTGCCCGCCAGG
TGTTCGACCGCCGTCCCACTCCGTGGCACGCGCTCCTCAAGGCCTACTCCCGCGGCCCTC
TCCCGCAGGAGGCCCTGAGCCTCTTCAGGGACGCGCGCCGGCACGCCGCCGACGACACCT
ACGCCTTCGTGCATGCCCTTGGGGCCTGCGCGGCCCTGGCGTGGCCGCGGGCCGGCGCGC
AGCTGCACGGGCTTGCCGTTCGCAAGGGGTTCGAGTTCCACGCCTACGTGCACACCGCCC
TCCTCAACGCTTACGTTGTGTGCGGGTGCCTGGCAGAATCTCGGATCGCATTCGACGAGA
TGCCGGCGAAGAATGCGGTTACTTGGAACGTGATGATCACCGGGTTTGCTGCGCGGGGCG
AGGTTGAGTATGCGAGGCTGCTCTTCGAGCGGATGCCCTGTAGGAATGTTGTCTCGTGGA
CCGGGATGATTGATGGGTACACGCGTTCCTGTCGCTCTGTAGAGGCCGTGGCTCTCTTCC
GCCGCATGATGGCTGAAGCCGTTGATCCAAGCGAGATAACTGTGTTAGCGGTTGTACCTG
CGGTATCTAATATTGGAAGGATTCTTTTGGGTGAGGCCTTGCATGGCTATTGTGAGAAGA
AGGGGCTTCTTGTGTTGGACATCCGAGTTGGGAATTCGCTCATAGACCTGTATGCCAAGA
TTGGGTCTATAAAGAACTCACTGAAGATTTTCCATGAAATGCTGGATAGGAGAAACTTGG
TGTCATGGACATCAATAATTTCAGGGTTTGCAATGCATGGGTTGTCAACGGAGGCTGTTG
AACTGTTTGCAGAGATGAGAAGAGCTGGAATTAGGCCTAACAGAGTCACCTTCTTAAGTG
TTCTCAATGCTTGCAATCATGGTGGGCTGGTCGAGCAAGGAGTACTGTTTTTCAAATGCA
TGGTTTATGAGTACAATCTGACGCCAGAGATCAAGCATTTTGGTTGTATCATAGACATGC
TAGGTAGGGCTGGACGGTTATCAGAGGCCGAGCAAGTAATAAGTGGTCTGCCTATGGAGG
TTAATTCAGTCGTGTGGAGGACACTGCTGGGTTGTTGCAGTAAGTATGGGGAAGTGGAGA
TGGGGCAGAGGGCAATGAAGAAGATACTAGACATCGAAAGAGAATCTGGATCTGATTTTG
TGGTTGTATCCAATATGTTTACTGAGCTTGGAAGGTTTGGTGATGCTGAAAGATCAAGGA
AGCTAGTAGATGAGAGGAGTGTTGTTAAGGTTCCTGGGCTTGCTTTGGTTGGTGAGAGTC
AGTAAACCAGAACCAAATCATAGAAAGAAGTTCCACGCAGTTTTAAGAGTTTTTGTTCCA
TCATTAGAATTGTCTCCTTGCATTATACCAAATGCGATTGGATCTTCCTACTTTATGGTG
GGTTTATTGTGTTCTTTTGCCTTTTATATATTTCATGCAAAGTTAAAAGAACTAAGAATT
CAGTTTATTTCTTCTTGGCTGCTGAATGATTGTTGAATCATATGAGCTTTGTATTTAGAA
ACCACCATCTCATTGTCCACTACTCGCTTTTTTTGTATAATATGTTGTTAATAAGCATCG
ACAGTATGCTCATTTCTTCCACTTTCTAAATGACTAGTTCGCGGTATAGTCTTTGTCGCT
CTTTTACTTATCTTGGTAATCCCTTGCAGGAAGCAGAGGCGTTGGATGACATGTGCAGTA
CTGCATTTCCCCTCACTGGCCCACAGTTAATGGAAAATTCTTGTTTCTTTTCAGCATTGT
AGTGATGGAAGCCATAAAGAAGCTTCATGGCCATCTCATTGTTTCTGGGCTGTACAATTG
CCAATATGCAATGTCCAAGATTCTCAGATTCTATGCTATTCTACAACCTGATATGGCTCT
TGCTTATAAAGTATATGGGCAGATTGAAGCACCAACAACTTACCTTTGGAATATCATACT
CAGGGGGCTTGCTCAAAGTGATGCACCGGAAGATGCAGTTGCTTTCTACAAGAAGGCTCG
AGGAAAAGGTATGGAGCCGGACAACCTGACGTTTCCATTCGTAGTGAAGGCGTGTGCAAG
GATTAGTGCTCTCAAGGAAGGGAAACAGATGCACAGCCATGTACTGAAATTCGGGCTTCT
TTCAGATATCTTTGTTTCCAATTCGTTGATTCATCTGTATGCTGCCTGTGGTGATTTGTG
CTGTGCAAGATCTGTTTTCGATGGGATGCTGGTTAAGGATGTGGTGTCCTGGAACTCTTT
GATATGTGGATATAGCCGGTGCAATAGATTGAAAGAGGCTCTGAAGTTATTCAGGTTGAT
GCACGACGAAGGAGTGAGAGCTGATAAGGTCACTATGGTCAAGGTTGTTTCTGCATGCAC
TCGTATAGGAGATTGGAGCATGGCAGATTGTTTGGTTAAATACATAGAGGATTACTGCAT
CGAGGTGGATATCTATTTGGGCAATACTTTGATAGATTACCATGGCAGACGTGGGCAGCT
GCAATCGGCAGAAAAGATTTGCTTTAACATGAAGGATAGGAATGTCGTGACACTGAACGC
AATGATCAACGCATATTCAAAAGCCGGAGATCTGGTTTCGGCAAGAAGGTTATTCGAGGA
AAGTCCTGGCAAAGATCTGATCTCATGGAGCTCTATGATATCTGGGTATTCGCAAGCTAG
TCAGTTCTCTGATGCTTTGGAACTCTTCAGGGAGATGCAGAGAGCCAAGGTGAAACCAGA
TGCGGTCGTGCTCGCGAGCGTACTCTCTGCCTGCGCGCACCTAGGAGCGCTTGATCTCGG
CAGGTGGATCCATGACTACGTGAGCAGAAATCAGATCGAAGCCGACACCATCCTGCACAA
TTGTCTGATCGACATGTACGCGAAATGCGGAAGCACCAAGGAGGCGCTGGAGGTCTTCAG
AGAAATGAAAGAGAAGGACACCCTGTCATGGAACTCGATCATAATGGGGCTGGCGAACAA
CGGCGCCGAGGAGGAAGCCCTGAACGCCTTCCGCGCCATGCTCGCCGAAGGGTTCAGGCC
GAACGAGGTCACCATCCTGGGCGTGCTGATCGCGTGTGCCAACGCGGAGCTCGTCGAGGA
GGGGCTCGGCCACTTCGACAGCATGAGGTCGGTCCACGGCATGGAGCCGCAGATGAAGCA
CTACGGCGTCGTCGTCGACCTCCTGGGACGCGCCGGTCGGCTGACAAAGGCGCTGAGGTT
CATCGCCGAGATGCCCGTCGCTCCTGAGCCCGTCGTCTACAGGATATTGCTGGGGGCGGC
CAGAACGCACGGTGATTTGGGCGTCGCCGAGGTGGCCGCCCAGAGGCTCAGGGAGCTGGA
CGGCGGTAACAGCGGGGACTACACGCTGATGAGCAATGCGTATGCGGGTGCTGATAGATG
GGGCGACGCCATGCAGGTCAGGCAGCGGCTGGAAGATAGTCGTGTGAGGAAATTGCCCGC
TTGCAGTGTCGTCGACTGTTGACCCTGGTAGCTACAGCTCGGGTCCATGACCAAGAGAAA
TATGTCAGTTATTCTGTAGCCAATTTTGTCATAACGATGTGAGTAATACAAAAACGATTA
CTCCTTCCGTTTCTAAATATAAGTTTTTTAAGAGTTTTCACTAGAAAACTACATATGAAT
GTATATAGACATATTTTAAAATATAGATTCATCCATTTTACTCCGTATTTAGTCATCTTA
TGAAATCTTTAAAAAGACTTATATTTAGGAACGGAAGGAGTATGTTTTAAGATGTACCAC
GTATCATTCTGTCTCAAAATAAGTGTGTTTTAAGTGTGTTAACTCTAGTACAAAGTTTTT
AAAATAAGTGTCTTAGCTCTAGTATAAAGTTATACTAAGTTTAAAACATGTATTTTGAAA
CGGAGGAAGTATATTACTTGTATTCATAATAGTATTTCACGCTGAAGAAACCTTTAGCCA
GGAGGCAATTAACAAGCCGCAATAGCGATCGACCCCTAACGGTTTGATCTGGATCTAACT
TCATAAGGCCTTTTTCGGTTCCACCTCTTCTCAAAAGGATTAAAAGGAATTAAGATGAAA
TTTAACTTGTAGCGGATTATATCCACCTCAATCCAAGGCCTAAGGAGCATCAGTCCACGC
CGGCTCCAGGGCCAACGCCAACCGGCCCTTCAATACCAATTCTTCCTTAAATCCGCAGCA
GTCATCGCCACCGCACTCCAACAGCAACGCATCCCCGTCCGGCTCATGAGCTGGAATACC
ATTGTTACTATGAGCACCTTCAGCTCAAATCCGCTTCAGGCATCACCACCGCGCTCCATC
TCCGTCCTCTCATCAGCAACACCTCAGACAAGCAGAGCACGGGCTGGAAGACCATTGTTT
ATCCAAGTAGAAACAATGAGCGCCACCAGCAAATGAAATAGAAACACTTGGACTAAAACA
GCCCTGGATCTGGAATCACCACCAGCAAAGGAACAAAGCCAAATTTGTCATCTAAAGTAT
TCGCAGCAAGTTATCCGCTCACTGCTCGTGCTCTTATAAATCTGCTCCTCCTTTCCTAAA
TATAAGACCTTTTAAAGATTGTATTATAAACTACGGATATACATAGACATATTTTAGANN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTCTCCTAGTGAAATCCCTAAAAGGTTCTAT
ATTTTGGAACAGAGGGAGTATAACTCAGCCGCGTTTAAGTTTAAGTGTAACCGAGGAATC
GGTTTCCATTTATTATCCAAGTAGCAAGACCGTTTCAGTGTAGCTACAGAATTAGAAATA
AGACTGGGCACTTCTGCACAACGGCAATTGCGATGAGAAAACTTGTGATAAGAACCAGCA
CAAGTACCATTCATTGTAAATAAACTCATCGAGACAATCCAAAACGTTAAGACCATTCAG
CCTCACAGAAAAGGTGCAAATTCAAGAGGGCAAGGTAACTTGAGAAAGGTCTATGATAGT
AGGATAGGATAAGAAACAAGGCTAGGCAGCACAACTCTATGTCTATGATGTAATCGACTT
TCAACGCTTGCCGCCGCCACCGCCAAGCTTTGGGCCCTTGGAACCCTTCTGCACGGCACC
CTTGCCCCCCTGTGACTTCTGGGACTTGGTCACCTCTGCCTTCTTGGCCTTCTTCTCATC
CTTGGTCTTCTTGATGCGCTCCTTGATCTCACTGCAACATGATGAATCAAGGGTAAGATG
ATTGAAAAGCAAACAACAATACCAACAGTTGCTAGAAGATACAAAGTTATCGATTTCTGC
AACAGAAGATGTATGAGTAGACACAATGCTGGTACAGTTCGCTATAATCATATAGGAAGA
TGGAAAATGTACCGAAGAGCGGCTTCTCTGGCAGCATCACGGACTTCAGGCTTCTCAGCC
CTCTTCTTCTGGATAACTTCCAGTGTGGCACCAACAATCGACCGTGAGTACGGCTTCTTG
GTGGTGCGGCGCCTCTTCTTGGCAGCCTCAGCATGGATGTCCTGCATTGTCACATCAAAG
CACAGCCCAGTAAATACGCAGGACAGGACAAATCAGTAACCAAAAACAAAAAATAATCCT
TTGTTGCAGAAGGAATTGCACGCATAAATACAAGCATGCTAGCAGAAGCAGTGTATGCAT
CTATAAATAACATAACAAATGTGATGTAATTGTCTCTTAATAATACCAATGCACAAAGCA
TATCAAACTGTAGGGAGGAATTTGCCCTCAAATCAAGAACAGGCGAAATGCAAATCACAA
AACAACCAGGTTCATGCAAGTAAGTTTTAGCAACATTTCTTTGGCATAAAAAGGGATAAT
ACAGTAACTGCATGATGGAGAACATTAGACCAAAAATTAGTATCTTAGCAGGCAAAATGT
GATACCTTCTTGTGCTGCTTCCTGTACATTGCTGTCCAGCAAAGCTTTGCAGGCTTCAAG
CGGTTGTGGAAGTAGCGCTTGCATTTTGAGTTGGCAAAGAGGAAAACCTGAAGTACAAAA
TATTTGAATCATTAGTCGGTTGTCACTGTTTGAAGATGAATCAACATAAAATCTTCTAGA
CTTAATACTTATGACCTAGTCCATTCAAAAACAATATGGTGACGTATATAAAACAAAGTT
TACCTGTGAATCTGAACGAATGAACCTGATACCCTTCCCTGGGTAAATCTTCTGGCCGCT
AAAACGGCAAAGCTCAGTCCTGTAGAACAAATGAAACAACAATTTGAGCACTGAAGACAA
CAATTGTAAAACCATACTTGAGATATCACTACTATCAAACTAAGTACAGAAGGCATGCTT
ATTTGCAAAAACTTAGTATATACTTACTTCAGAACCATCTTCTCAGCCTTGGAGAACTTT
CACAAGCTCCTACCTAAAAATGAGATCAGAACAAACATTAGCAACACTTCATAATAAGGA
CATAAAGCAAGGAAGCGGACACAAAAGAACAATCAACAACAAAGCAGGCTCGGTAGCATG
GAACAAGCACAAACACACAATCCTCAAAACTCATAATGACCAACGGGGTGTAAATTGTGT
ACCCTTGTGGATACTAAGTGTGTGATATTGGGCGACTACTGGCTGCAGAAAGTGGGGTAA
ATCTCTGCTGCAAAGCGGGTTCCCTGTTACTCTTGCACAACAAATAATTGGCAACTGAGC
AACCAGAACGGCTACCGTGCCTCAGTACTTGTGCTCTGGTCCAAGTGAAAAAACTACAGG
TTGTGAGATTCGACATAGTGGACCTCTTACTATCTTTAGGCACAAAAGTTAGCTGATTAT
CAAGTCTACTCACAGGAGAAACTCTGGACACAAACAATGTCCATCTCGCACAAGAATCAA
ACGAGTGATGTTGGGCGACTACTGGCGGCAGAAAGTTGAGTTCAATCTCTGCTGCAAAGC
GGGTTCCCATGTTTCTGTTGCACAACAAATAAATGGCAACTGAGCAACCAGAACGGCTAC
CGTGCCTCAGTACTTGTGCTCAGGATCCTACTGTAGACAAACATAGAAAAACACAACACC
TTAAGCGTAAAAGGCTGGGTGATTACTGGGTAACTGCCGGCAGCAGAAACACAACGACAC
TTGTACTGCACGGTAAATATTAGGCCATCGAAACTACAACAGCGCATCCGTGTTCGGTGC
CCCAGGACCTGTGCAAGATCTCACGAACAGCAGGCAGATAATCAGGTTGCGAAACAAAAC
TACCTGCGGTTGAGGTAATGGACGCATCCAGATCACGGAACAACAAACCATGCGTCGTCC
CATGGCGCGCTCGCCCGCATCTAAAGAAAGGACTCGCGCAAAACGAACGCAACTCGAACA
CCCATGACGGCGAAACCCTAGGAACTAGGCAGCTGCCGGTGACCTTACGCTACGAACCGA
AGGACGCGGCGGCCTATCATCGGGATCCAGACCAACCAGACCTTGCGAAACGAACGGAAG
AACTGGTGGACGAGCTGCGCGGCGTGAGGAGGACCGGCGGCCGGACGGACTGACCTAGGA
AGACGGGAGAGATGGAGCAGAGGAGGGAGGGATGGAGGGAGAGGATGGGAGGGAAGGTAC
CTTGAGCGAGGAGGAGGCGCGGAGGCGGCGGCGGATGGGGGGAGTGGGGGGAAATGTGTG
CCGCGGGTAGGGTTTTGATGACCTCGCGAGGGGTGGGGTGGGCGTGGGCGTGGGGTTGTT
GGGCTAATGGGCCGTTCGAGTAGGGTTTGCTGATCGTAGCCCACTGTTGCTGGACCGGAT
TTTTCGTCTAGTAGGTTTTCTCCTCGTGTGTATAAAAAACAGAAATTCGAGGATTTTCCT
GTCAACCTAGGATCCAAAGCAGGCCCTGGTTTCATTTCTGGGCTTGGCATTGGACAGTAA
CTGCATTTTCGTTGGGCCACGTTTGATGCAACCTCGTGGCTGCGGCAAGGCAAAACGCTT
ATATTAGCGAAGAAGCGACTTTTTTTCTTTCTTTCTTTTTCCTTGGGTAAAAAAGAACGA
CCTCTATTTAGATCTTGTTTGGTACTGCTGTATTTTAAAAAGTTAATGTGGATTGTTCCG
GTTAGAGCATCTCTAACAGACCCTGTATAAAGCCAACTCATAAAAATCGTTTACAATTTG
CAAAAAAAGGGTTTTGCGGACCGACAAGGGCGTGGGGAGAGTCAGATCCCGCAAATCGAA
CTCGTAACAAAGGATATTCATAGAAGATGCTTTTTTACGGGTCGACGATGCGGGGTCTAC
TCGGGCGGCACCAGTGTCCACCTCGCAAACCGAAGATCCCGTAAATCAGAATTACAAATG
TGCAATATAAGTAAAATGTCAATATTACAAATAGAGTAATCATCCAAAGTACAATAATTA
TGCAAATCGCCGTAGCAAACTAAAAAGTTCAATACAAAACTTGTCTCGTATACAAGTCAC
ACATGAATGCAACGAAAATGAATGGAAAAATGGAATGTGTTACTGCCCAGCTCTTTGCCA
ATGGTGCTCAGTGAGATCCTTCTGAAGTTGACAGTGGGTGTTTGCATTTTAAATCTCCAT
GTAGGTATGAAGAAAAGCTCTAATTAGGTTAGGGTCTCTAGCTGGTTTGACACGGCTACC
CACATTGTCATAGAAGAATTTCAAGTTCATGCCTCTTTCATCTTCGAGAATCATATTGTG
AAGAATAACACAACATGTCATGATGTTTTCAAGGATAGCTTGTCTCATAACCGAGCAGGA
CCACGAACAATGGCAANNNNAGATTGCAAAACCCCAAATGCTCTTCAATGTCTTTTCGGT
CTGCCTCTTGTGCCCTTGCGAATTCAGACTATTTCCTCTTTGGAGGTCTTTGATGCTCTT
CAGAAATGTGCACCAAGAAGGGTATATACCATCTGTAAGATAGTACCTTTTGTATATTCA
TATCCATTGATAGTGTAGTTGCAAGGTGAAACATCGTCACTAGCAAGCCTAGCAAGCAAA
TGAGACCGTTCCAACACATTGATAGCAAGCCTAGCAAGCAAATGAGACTGTTGCAACACA
TTCATATCATTTAGAGTACCCGACAAACCTATGCACGGACTCAATTGTACTATCTTCCCT
AATGTGAAGGTACTCATCGGTATAGTCAGCGGGAACGCCGTATGAAATTACCCGCATAGC
TATCGAGATTTTTTGATATGCACTAAATCCCTTCACGCC
