Contig Data
morexGenes
Links



Map Locations of contig_6484 (3869 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_6484

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_73968 3 948 bp AK365002 Available Available None





CDS Structure of MLOC_73968






Contig Sequence (3869 bp)

>contig_6484 3869 assembly3_WGSMorex_rbca.fasta
TCATGTGAAAAGAGGAGGTAAGAGGCGATAAAGCATTGCAGCTTCCGGGCGTGAGTGAGG
CTTTATTTTTTAAACCAAAATACAATTTTCACGCTCTAAAAATATATGAAAAAAGCATAT
ACATAGGTACATGTTCATAATATACATGTATAAATTTTAACTAGTATTTATGCTCTTATG
TAGCGTATACAAAATGACAAATACATAGATTAAAATGGGCCTTATCTTTGTTGTGTTTGG
GCCAGATTTTTATCTTTTTGTGTAGCATGCAAACAACCGAATTATCAGATGAAACTTTTT
ACATACTTGACTACCATATATATGTATTTATATAAAAAAATATTATTTTTTGAAGCTTTT
AAATATATATTGATTTTTTTGTATACCGGGTTCACTGAAGCCCGGTATGTGCAACGCTGC
GCTCGGATAAGAGGGTACGTGTTAAAACTGCTCATAGGAGCATCAATCATAAATCGTCGT
GCGACTCCTTGACACGTGCCTCCCCCTCCGCATGAGGATGGATGCAATCTAAAAGGATGC
GTACCTACCAACATCCACCTCCACCTGAGGGTGCGCCAAGAAAAGATCTGGGCGAAAGCA
CCACCTCCGGGAGCCACCGACGCCTTGGTCGCCCATGCAACCAGGAACACCAAACATACA
TCACCATCACCATTGTTGTCGTCCACCACTCTATCGTCATGCTCATACATAATTAGCACA
CCAAAGAAAAAAAATCATCGAAAGACATGCCACCATCGCATCACTTCTGAACGTTGTGCG
ATGCCATTAAGTTGATGGTTGTCGTGTGCGTCACAACGAAGTTCATCAGCCACTATCGTC
AGATGTGTTGCTTTGATTAGGAAGTGAGAAAGGGCCCGCTCCGGGCCACTATTGAGCCTG
AATTGGCCTCGAGGGCTTTCCGCTGGCATCGATGAACGAGGGGAGCGTCGTACACAACCT
CCTTATAAGATCGAGGCATGCCCGATGCACCGCGTGTGATCTGCATGATCTGAAAAGCCT
CGCTGCCGTTGTGCTTTGCACCAAGCTGCACCCGTCGTTGCCGTCGATCCGCTCTGAGAC
ACCATGTTGCCCCGCTACCACCACAACGATCATGAGAGGTTGTGTTGCCAAGGCCGAGGC
CACAAGCCTCCCCTCCCCTCTTGAATTGTAGTAGCACACAAATTTTGACATGCTCCCTCT
TACACTCTTATTTTACATGTATGGTAAGAAGGTAAGAGTTAATCAGATTTGTAATTATAA
GATCAACGACTCAAATCTATTATATCATGTGAAAATAGAGGTAAGAGTGAGCATGTTAAA
CCTGCTCCTAGGAGCACCAACCAAAAATCGTTGTGCGACTCCTTGGCATGTGCCTCCTCC
TCCGCATGAGGATGGATGCACTCTAACAGGATGCGTACCTACCAACATCCACCTCCACCC
GAGAGTGCGCCATGATAAGATCTGGGTGAAAGCACCACCTCTCGAGGCTACTGATACTTT
TGTCGCCCACACAACCAGGAACACCAAACATACGTTGGATCGGAGCCTCTGTTGTAGCTT
CCCGAAGTCGTTGAGGAGTAGTACCGCCTTGTCGCCCCCATTCATGGCAGTTGCACGACT
TAGCCGCCATTGGCCTCCGAAGGTGGCAAGGAAGGTAGATGATAGCGAAGAGTGGTGAGA
AGTTGTGCTAAGGATGAGTTCGAAGAGATTGGAGGAGGCGACGCTAGGTTATGCATGGGA
CATGCATAGGAATAAAAGTGTGGGAGAGAAAAACTTGTTACGAAAAATACATGCATGCAC
GTAATTAATTTCTAAAACTTATTGGTGTGATGATGACATAGTTGTATGCGTTTTTGAATA
GTCAAGTGGAGACTTAACTATTTAATTATAGAAGATAAATTAAAAATGCAAAAAATAAAG
TGACTAATTTTGAATAAAAAATATTGTTTTCGGCATTGTCTGCTTAAGCCAATCTTAGGG
ATCGCCCAGATCAACCCAAGTACGAGAACAGACCAATAAGCAAGCCCATTCTCCGCGAGA
GTGCCTTCTAATTCTGAGCTCAATGATCCTTCATGAAAAATAAATAAAATATAAAAAAAC
AGAAACACAATTCAAACAATTCTGATTTTTTACAACAAATGTTTCTTAGTTTTCTTTATT
CCCGATTTTTTTTGCGATGAATCACATTTGTGGAGGTCTGAAAAAATAACAAAATAAACG
CTACAAAATGCTTTTAAAAAATAAGTTTTGAGGCATCAATTTTTTAGAAGAAAAAAATCC
CACGAAATTCCATGTATGTAGAACATTTAACAATGTTGCTGCCAAAGAAATAACAAAATT
TGTCTTCAAATTACTCCATCTTTTATTTTATTATTTATGAGTGCATTTGAGCTCGGAAAC
GCCACATTCCATTCTCCGGGCCTAACCAGAACATGGTGGTGAATCGTGATAAAGCGCCAC
ATCAATGGGGGATCGAACAAATGGCAAACCATATATCCTCTGTCATCTTTCAATAACAAT
CGAATGAGTTGCAAACCTGCTACGCAGGAGCAACTAACGAATACTTGAGCAGCAGTAGGA
AGCAACAGAGATCCCACAAAAAGAATCGAAGCAACTGACATCAAGTAAAGCAGCAGCATT
GCAGCCACAAGCAAGCAAGGACTCGACTTATTAGGGGGGAAGCAGAGTCGCCGCACAGCA
AAAACATGCGGCAAGCAAAGCACAAGAAATAAACATTCCAGGTTCACCCTCCTGTATATA
TATGCCCGGTGCCAAATGAACAGAAATGTGTTCAGACTTCAGAGGGAAATAAGAACGGAC
TGGCCTGACACCTAGCTACAGGGATGGTTCTGACGCATGTTCAGAGCGACGAGGCGGCCG
CGTCGGCCGCCGTGTTCGCGTCGAGGTACGTGCAGGAGCCGGTCCCGAGCTACGAGCTCG
GGGAGAAGTCGATATCCAAGGACGCGGCGTACCAGATCATCCACGACGAGCTGCTGCTGG
ACGGCAGCCCGCGGTTGAACCTGGCGTCCTTCGTCACCACCTGGATGGAGCCCGAGTGCG
ACCGGCTCATCCTCGAAGGCATGAACAAGAACTACGCCGACATGGACGAGTACCCCGTCA
CCACCGAGCTCCAGGCAAGCTAGCTAGCGAGCAGCATTTCGTTTCCAGTTCGGACCGGTC
ATGCAACCTCTGTTAATTTTGATTTTGATCGATGAACGACGCCATGTCCCCGCAGAACCG
GTGCGTGAACATCATAGCGCGGCTGTTCAACGCGCCGGTGGGCACCGGCGAGACGGCCGT
CGGGGTCGGCACGGTCGGGTCCTCGGAGGCGATAATGCTCGCCGGTCTGGCGTTCAAGCG
GCGCTGGCAGAACCGGCGGAAGGCGGAGGGGAAGCCACACGACAAGCCCAACATCGTCAC
GGGAGCCAATGTTCAGGTAACTGACACGATAGATAACGCGCGTACGTACATTTCCTGATT
CATAACGCAAGAGTTCGATCAGAAGTACTAACCTGTTCTGCTCTGCGACGCAGGTGTGCT
GGGAGAAGTTCGCGCGCTACTTCGAGGTGGAGCTCAAGGAGGTGAAGCTGAGCGAAGGGT
GCTACGTGATGGACCCGGACAAGGCCGTGGAGATGGTCGACGAGAACACCATCTGCGTCG
CCGCCATCCTCGGCTCCACCCTCACCGGCGAGTTCGAGGACGTCAAGCGCCTCAACGACC
TCCTCGTCGCCAAGAACAAGCAAACAAGGTCTGCTTCAAATCCGTGCATCAGAATTCAGA
AATCCTGTCTTATGATTATGACGTGGCTGGCATCTTCTGGCTGGCAGGTGGGACACCCCG
ATCCACGTGGACGCGGCGAGCGGCGGGTT