Contig Data
morexGenes
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Map Locations of contig_64828 (5344 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_64828

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_73962 1 1997 bp MLOC_73962.1 Available Available LOC_Os02g35600.1, FRAME:+1, EVALUE:5e-34, 13102.m03870 protein PHD finger protein, putative, expressed





CDS Structure of MLOC_73962






Contig Sequence (5344 bp)

>contig_64828 5344 assembly3_WGSMorex_rbca.fasta
GTACATCATGACTCGACCAAAGAATCATGGGGGCCTAGGATTTAAAGACTTAAAGATTTT
CAATTTGGCTCTGCTGGCAAGACAGTCTTGGAGGTTATTAAAGGAACCTGAAACTTTGAG
AGCTAGAATATTGAGGGCATCATACTTCCCCAATGGCACAATCTTAGACGCTGAAATTGG
GTCCAAACCATCTCAGACTTGGAGAGCCATCACCGAGGGACGGGACCTGCTTAAGCAGGG
ACTGATCACACGGATTGGGAATGGACAGAGTACAAAAATATGGGATGACAATTGGATCCC
GAAGGAAACTACACCCCGTCCGATCACTTGTTTGATCTCAAACCCACCTGCCAGTGTGTC
CGAACTGCTTTCCCCAGCAACGGCTTCATGGAATGAAGGCTTAGTACAGTCAGTTTTCCT
ACTGATTGATGTGAATGCCATCCTGAAGATGCCAATTTGCACTAACAATACCACAGATTC
CTGGGCATGGTTTCCTGACAAAAAGGGTAAATTCTTTGTCTCTTCGGCCTACAAGCTGCT
TCTGCAAACCAAATTGCAGAGGGAGGAATGGCTTGAGGGCCGCAGCGGCTCCTCTCATTC
CCCAAGGGATGAGGGATCGTGGTGCTCCTTGTGGAAGCTGTCCGTCCCAGCCAAAGTTAG
AGTTTTTTGTGGAGACTAGCGCATCATTCTCTCCCAACCACAGATGTGTTGAAGCATAGG
AAGATGGTAGACCAGGATGTATGCCCACTTTGTGGCGGCCCGGATTCTTGGAGACATGCT
CTGGTCTCTTGCACCATGGCCAGGTGTGTATGGACGCTTACATGCGAGGGGATTGTCTCT
CATATGGCAGGTAACACTGAACCGAATGCTAGGCTCTCGCTCTTTGAGCTTAGTGATACT
TTGGACCATCATAGCTTCTCTCGGATGGTTGTAACTCTGTGGTCCATCTGGTATGCAAGG
CGCAAGGCGGTATATGAAGCTATCTTCCAAAACCCACAACAAACGAAGACCTTCGTTGAT
AACTTTATTGCAGAGCTGGGGCAGGCGGTAAGCAGCACTTCAAGAGGTCAGTTAGCGGCA
CTTCAGCCACCAGTGGCATCATGGAGTCCCCCTCCACTCGGGTCCGTCAAGATCAATGTT
TCTGGAATTTCTTCAAGGCTATTCCATGGAGGTGTGGTGGCGGCAATTTGCCGTGATCAC
ATGGGCCTCTACTTGGGGTCTTCGGCTGTGGTGTTCCTCGGATCCAATGATCCTGCTATA
TGGGAGTCTTATGCTTGCCGAGAAGCAATATTTCTCGCTGAGGATCTCGACGAACAAAAC
ATTTGTGTTGCTTCAGCCTGCCGGGAGGTGGTTAACGATATCACTAAGGGGACAGGAGGA
CCCAATGCAGCTATTGTTCAAGAGATTAAGTATCGATGTAATAGATTTTAGTCTAGTTCT
TTTTGTGTTGAGTCTAAGGTTCTTAGTGATGAAGCCATTAATCTCGTTAAATTTGCCTGT
AATTTAGGTGAGGGTAGACATGTGTGGCTGGGCTCCCTCCATGACACAAACATTATACCT
ACTGCACGTGCTATGAATGAATAAGAAAGGCGAGATTTCTTTAAAAAATCAGAAAACAAG
ATTATAGTTGTTGTTTTTTTGACAAGTTTTTTTTCAAAAAAAAATACAAGATTATAACTA
GTTGTTTGCATTGAAATGATGCATAGGCCGAGGATAATTTTCCTCTTTTGAGAAAAATTC
AACAAACAAGACACCGTTGCACGAAAAGAAACCCATACAGCCCCGGGTGTGGCTTCACAG
GCAGGAGTAAAGACGGGGGATTCCTCCATTAAAAAAAAAAGACGGGGGGATTCCGTGATC
TTCACCCGGCCCACTTCGCCAGCGTTCAAAATCTCAAACTGCAGCTTTCTTGCGAAGGCA
CGAACCCGGCTTCCCTACTCCTTCCGATTGCTCAAGTGGAATCCCCTCCTCCCCCGCCAC
CAAAACCCTATCTCCGGCGGGCCGCGTGCTGGGCAGCGGCGATGGCGGAGGACGCCTTCT
CGCCGGCCATCCACCCGAACTTGCACGGCCCGGAGCACGTCTTCCGGCAGTACTGCGGCC
GCCGTGCCGGCATCGTGAAGGCCCTCACCGAAGGTCGGTCTGTCTGTCTGTCTGTTTCTC
TCTCTCGCGCCCCTGGTGTGGGTTTTGATGCGGGGATTTTTCACGCTGATGGTTGGTTTT
TATTTGTTTGTTGGTCCGCAGATTTGGAGGAGTTCTACGAGCAGTGCGACCCCGGTGAGT
CTCCTTGGTTGCTTCGGGTGTTGATTTTGGGGGAGATAGTAATTGGGGTGCAGAAGCGTG
TTTTTTTTTTTTTTTGAGGGGAGCAGAAGCGTGTTTATATGGTAGTTGCGGTAGTTTCTC
TGACGCCTTCTTTCCCCAGCAACCACTGGTTTTCATGTGTTGATTGATGAACTAATTCCG
TTTGTCTCGGATGGACCGAATTTGCTAATGAGTAATGAGTCAAATTTAAAAGTCAGGGAG
TCAAATCATGGCAGAATTGCGAGCTTGGTGAATGGTGATAGTATGATGCAACGAAATTCT
GTATGCCTTATATGATTGCTACTAGAACATTTAGCCATCCCTTCTGCTTATACTCAGCTG
TAAATTGGAAACGTGAATACTAACAATGTGGGTAAATTGGAATGGCCTGTCGAGCTTTGA
TTGGCCAAAGGATCGAGCTGCAGAATTGGAAGTCCCGAACTCCCAATTGCCTCTGTCAGT
AGTTGGGTGTCACTGCAAAATGCTTAGTTTCGCTGTACTCCGTGTTGGCATCAGCTTGTA
TGTGCTTGTGGGTTTTCATTGAATTAGGGATACTGCATATACTAACATGTTCATTTTGTG
TTATGTTGTGTTCCGGGTTACTTGTTGAGTGCATCAGGTTGTTCATATTCGTAGGCACAA
CTCTGACTTATGATGGCCCATTATTTGCCAGACAAGAAGGCCTTGTGCCTCTTTGGACTG
CCTGATGGGACCTGGGAAGTGAATCAACTACCTGAGGAGGTTCCTGTTCAAATTCCTGAG
CCAGTATGTGGTATAAACTTTGCGCGTGATATTACACCCAAGAAAGTTTGGCTATCCATT
GTAGCTGTTCATAGTGATGCATGGTTAATGTCCATAGCATTTTATCACGCGGGCCGTGTC
TCATTTGACAGAGATGGCAGGTATGCTGCTTTTCTTTACTACAAACGTTATATTTCTTCT
TCTTTTACAATAATTTTCTTTTTCAAGCAAGACATTTTTACATGTTCAATGTATTGCGTG
ATACAGTCCATGCTTTGCTTGCTACAACTTACTATGCACAAAGATGTTCGGTACTGTGTC
ATACATTTTATTTCATTTTCATTTTCGTTTGGAAATATCTCAATGAACTAATGTATGTAA
ATCTGTGAGTCTTAGGTCCTTTTACTAACATTTGTCATAATTCACTCAGATAATGGACCT
TATTTTTTGAATGCCTTTTGTCCCTTCTACCTTCTTATTTCTCATAGAACCCATAATTAG
TTGTTAGGTGCATACACCTCTTTACACTTCTTGTAACCCAACAAGAGTAGAGTGATCTCA
TAAATATTTGTCTTTTTTTCACTAGTTGAACATAAACCTCTATTAATTGAATGATGTCTG
AACAAAGAAAAAAGGGGATCTGAAAAAAGTGGAGCAGTACCGAGGATCTATATTTGGTGG
AAAGTATCAGTACTGGTATTCTCATCTAGCTTGCTGTATGTTTCAAGAAATCATCACTAT
TTAGAACATCTCCAAGAGACGGGCGGTACCGTGGCGCGCTAATTTTTTTTTACAGCGCCG
AAGTAGCGTTTTAGCGCGTTGGGCTGGTGTTTTGCTTTATCTGAAGCGCTATAAGGGCAT
GTCCAACGCGTCGCCTGAACCAGATGCCCCGCAGGCCAGCTCGGCTCGTGTGTCAAGAAT
GGCTGCCTCGCAGTGTACTACTGTGGCCTGCAGAAGAGGCGGATGCTATAGGGAAAAAGC
CTGAGAAAAAGGAACAAAGGGAGATCAACGGCAGGTCATTGTTTGCCTCTCGGTAATGCA
TGAGGAGGGAAAAGTGAAATAGGTGGGGAAAGTAAGAGAGAGAAAGGAACATGGGACCCA
CAGGCTGCTGATGCTTTCGTTGGGTGAAAGTTGTGCAAAACGATGGCTTCACGGATACAA
GCCTACGTGGAGGACATGAAACCACCGTATGGTGATGCTTCCATAGTTCATGCCCTAATA
TTGCGCGCAGCAGGTAGCGCTCCAACAGGCGCGCTAAATTCTAGCGCGCACGCCGAGCAC
AAACAACATTTTCCACTCAAACATAGAACGAAGAAAATCAAACACACACAAAGTAAATCA
ACAATAAATAGTTCAATTATTATTACAACAACAAAAATAGTTTATCTTCAATACAACAAA
TAGTTCATGAATAATACACAACAAATAGTTTATGAATAATACAACAACTAGTTCATACAA
CATCAAACTAGTTTTTTTGCCCATTCCATGACCACCACTCCTCGAATAGATCCTTTTGAA
GCTCATCATGTGTTTCGGCATGTCGAATGGCCTGATAGGAGGCAACAAAGCGGGCCACCC
TCGCAGCCCTCCTCTGCACTCGCACGGGTTGTCCCATCAACTCATACTGAGAATAGTCTA
AATCTTGCCCACGCTCATTTTCGATGATCATGTTATGCATGATCACACAAGTGTTCATGA
TGTACCAAAGGATCTTTTGATCCCAAAATCTAGCCGGTCCTCTCACAATAGCAAATTGGA
CTTGCAAAATCCCCAAAAGTTCTCTCCACATCTTTCCTAGTCGCCGATAGAGCATTGTGG
AAATCAAGTTTTTTCTTACCTTGCGGTGCCTTCAACGGCTTCACAAATGTTTGCCACCAT
GGGTAGATGCCATCCGCAAGATAGTAGCCATAGTTGTATGTATGGCCATTTGCTACAAAC
TGCACCGGTGGGGTTTCACCATTTGCAATCCTATTCATGAGGGGTGACTGTTTAATAACA
TTGATGCCATTGCAAGATTCGGACATTCCGAAAAAAGCATGCCAAATCCAAGTCTCATGG
TCGGCCACCGCTTCAAGGATTATAGTGGAACCCTTTTTCTCGCCGTGGAATTGTCCATGT
CATGCCGCAAGACAGTTCTTCCAACTCCAATGCATGCAANNNNTTGAGCCAAGCATACCT
GGGAACCCGTGAGCTTTGTTGACCTCCAAAAGCCTTGCGGTGTCTTCAGCATTGGGAGCT
CTCAAATATTCCAGACCAAACACTTGCACAATTCCAACTGTGAAGCGCTTGACACACATG
ATGG