Map Locations of contig_64812 (7626 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_64812

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_73954 6 3868 bp AK363964 Available Available None





CDS Structure of MLOC_73954






Contig Sequence (7626 bp)

>contig_64812 7626 assembly3_WGSMorex_rbca.fasta
AGTTGTATTTGAAGTTCGGTCGTACAGGCGACATGTCCATGAGCAAGATGATGGAGATTC
CTNCCCGATATGCCAATGGCGAAGAAGAAGACCGCATCCGCAACGGTAAAGGGAAAGCAG
TCGACAACAATGTTGGTGGCAACTCCAATCGGAAGCAGAAGTGCAAGCCTGATGGTTCCA
CTCCGGCAGAAGCAGCCGCCCTGGCGGCAGAAGGAATATTCAAGGGAAAACCCAAGGGGC
AATTTCCCCCCAAGAAGTCCAAGTGTCAGTCAGATATTTTGGATCAACCGTGTGTACTCC
ACACGAAGAAAGATGAAGANNNNAATCTGATATTGCCTAAGCACACCACTCACTAGTGTA
GGTTGTTGATCCAACAGTTTGAAGAGGATCGGTCGAGTGGAAAGGATCCTGAAAAGGAGA
ATGTTGAAGAGAAAGTTGATTTCCGAGAAGTTCAAGCAACGCTGATGACTTTTCTGACGT
GGAGAGCACGAGTCGATTGAAGGTCATCAATAGAGAAGTCAACATGGTTGTACCCTCCAC
CACCACATACCTCAAGTGGTCACAGACCCCCATAACGTTTGATTAGTCGGATCACCCAAC
TCATGTTGCTACTCGAGGTCGATAGACTCTGGTGGTTGATCCAGTTGTGGAAGGTGTTCG
GCTTCGCAAGGTCCCGATGGATGGAGGAAGCGGGTTGAATATTTTGTATGTAGAAACTCT
TAAGGGGATGGGCATTCCAATGTCCCGACTCAGCAAGAGCAATATGCAGTTCCATGGAGT
CATTCCCGGAAAGAAGGCCAAGTCACTCGGCCAGATTGCGTAGGAGGTCATTTTCGGTTC
TGACAAAAACTTTCGCAAGGAGAAGTTGAGATTCGAGGTGGTAGATTTCCATAGTGCATA
TCATGTCATCCTTGATCGTCCGACCTATGCTCGTTTCATGGCCCGACCATGCTACTAATC
AAGTCGTCAGCATGGTTCTGACCGTCGAGCGAGAAGAAGGCAAAGCTTACAAGGTCCAGC
GCCAGTCTATTAGATTTCTGAAGTATTGATCCCTTCGAAGCATATGTCTCCTCATTACTA
GAATCTCATTTATGGAATATACTTATCAGTAAAGAAGGTGATGCATTACTTTCAAGATCA
CTCGATATCAGCCATCAGCGATGCTCCATTATCAGAGATCCTTAACAATCGCGACGCATT
AGGTCGTGTGGCTAAATGGGCTATCGAGCTATTATATTTTGACATCAAGTTCAAGGCAAA
GAAAGCAATAATATCTCAAGCCCTTGCTGATTTCATGTTGAGTGGGTCGAACAACAGCAG
CCAGCTCAAATTCACTCGACACACTGGACTATGTTCTTCGATGGCTCCAAAATGTTGAAT
GGGTCCGGTGCTGGTGTGCTATTGGTGTTCCCAAAAGGCGACAACCTCAATTATTTTCTC
CAGATTCATTTTGATTACTCCAACAATGAGGCTGAATATGAAACCGTCCTCTACGGGTTG
TGTATGGTCATCTCACTCGGCGTCCGACGCCTGATGGTATACGGCGACTCAGATTTAGTG
GTCAGTCAAGTGATGTAGGAATGGGATGTCAGAAACCGTGCCATAACTGGATATTGCAAT
GCAGTAAGGAAACTTGAGAATAAGTTTGAAGGTCTTATTACAAGAAATATGCTAACTTGC
GACCTTCAATATTGATCACCGAATGGTCGTTGATTTCCATTTACGACCTTTTTACGACCA
AAAACAGACGGTCAAAAGCTGAGGATATCTAATGAACTATAACGACTTTTTTTATGGAAT
GGTCGAAGACATTTACGACCAACGAAAGGTCGTTGGTTCTACGGCCAATTGTATTGGTCG
TTGCTTGTTTGCCCAAGCCACATCGGATCCAACGTGGCAAAATTTTGACCAAAGGAATTG
GTCGTAGATTAGAATCAACCCGGTCCAGTTCGGTGTTAAAGATGCGCCGAGCCCATTTAA
AATATATTTTCTATCACTTTGCATCTGCTACGTGGGCCAAGCCCACGAATTTGATAATTT
GTTTTTCTAGGACGTGGCCTTCTACATTCCAGTTCTCTTTTGGGCCTCAAGAACAAATAT
TCAGAAACTTATGATTATTCCAGCAACAAAGTGAAACAAAGAGGGAATTCAAACAAGCCA
CGACACAACAGTAGGTACATTTGACATACTTAATTAACATAAACATGAAGCAACATAGGG
CAACCCAAGCACGTGAACTACACTACATGGGACTAGAGCTACCATTTCTACCAGCAACAA
CAACCGCCTAATAGGATTTAACCATTTCTACCAACAACAGAACCATCAATCATCAATCAA
TTACACTAGCAATTCGTAGCAATGGTGAAGTTCCAAAGACTTCAAACCCCCTCCCCCGCT
TCTACTCTTCTAATCCGTGTAGGCGTCGTGTACCCGACCTTGAGCTGCTCAGCCTTGGTA
AAGTAGGAAGCCTTCTTCTGCAATTCATAATTCATTTGAACATCAGTGTGGTGCAAGGAT
GAAACATTAGTGTGGTGCAAGGCAATGGATCTCAGGATAAGAAGTAACAGAAGAGGAATA
GTTGAAAAACACATGCAAAATGGCAAGGCGGATATGGAAACTAACATTCAAGCAACAGTT
TGAATCGATGAACATAGAGTGTACAAATCCTAACAGGGCTACAGACAATTGAACACACCA
AACCATAAATTTGAACAACCAAATCAAGATTAGGCAGTATATCAACAATTGCATAGCGAC
TAAATTTAAAGTCTCACTGACCAACTAGGTTGAACAATACCCAAATGACGCATTGCAGCG
ACACCGAAACATGTAAACCAACACATGGTCGGCCAAAATTTTATCGCATCATTGAGCAAA
CACTGAGATCACGCGGAAGAGACCAACATCGAATAGAGTGGTAACACAGAGGGGATGGGG
GAATAGGTAACTTACAGCATCACTAAGAGACTTCCACTTCTCACCACCGGCCTTGCCAAC
CTGCAATTAAAACACAAATCAAGACACATGATTCGAACGGAAAACTATCGCAAGGCGAGG
TTTTAAATAGCGGCCTCTACCCCCGCTCTTGCAGTAGCGCGCACCTAACGTTAACTCTTT
TGCATTGCATTGTGATATAGCGGGCTTGTCATGATTCGTCCGATACTGAGTATGTGACAG
CGATATTGCATTCTATATAGCGTTTTGTGGTGCGGTCGTAGCGCTCTCACTTCATAAAAT
ATGGTAGTCAGACCAGAACCCTAAACACCACCAAAAGCATGTGTGTCACGCATGCACTAT
CGTCCAAGCTCCTGTACGACCCACCTCTCTCTCCTTGGTTTTGATGCTAGCCTCAGGTGC
TGCTACTCTGGTACACAGTGGAAAGTGGAGAACCTAAACAATTTTTTTTGCGGGTAGAAC
CAAGACAGTCAATACACGAGAAGTCTGATCTCATTACAAGTTGATTAATTTAATATGGTG
CTTCTAGATAGAGAAGTTCTTTGATTAAAATAGTGAGGTTTGGGGCTGGATACACATGGA
CACAATTGTTTCATAAGTGGTTTTGTAGACTGTAGCCCACAGCTTTGACGACACAAAGAT
CTTATGTGCATGTCACTTAGGGAGACTGTCACACAGAGCTTATACAAATAAATTGCAAAG
TTAAAATAACAATTTTTATTAACAACTCTATAAAAATATACGAAACACGCTTAATATCTT
GCACATTTTTATAAGTATGTTGTGAGGACATAGCGCCCGCAATAGCGCCGCAATTTGCGA
TCCGCTATACCGACCCAAATCCATAGTGAGCCCACTATCCGCTATTTAAAATCGTAATTG
TAGCACCATTTCGAACGAGGAGAAAGAGAAAGGGGCGGGAGAAAATGGAACCGAGATGCT
TACCAGAGAAACCTGCTTGATGTTGGAGTCCTTGCTGAAGCTATCCCTGTGAAAAGAAAA
CCAAAATGCCCTGCCCCTAGTCAGGACACGTTACGATGCCACAGAGGCAACACAAACCGA
ACCACGCCAACGAATCGAAACCAGGGCTGCCATGAAGACTAAGAAGGTGCTTGAGGTGCG
CTTGGGCTTGCCGGGGTCCTACTCGGCCTTGAGGTTCTTCACCGCGAGCCTGCGCTGGCA
CAAAAACATCGACAACAAAGCGAACCAAAAACAGAGGCAAAACAACAACATTTTTCAGAT
TCCAGACAACTGAAAATTGAACTACATTACTAGTATCAGCCACACAAAACTCCCTGACAT
TAGTATATTCAGGACAAATAAGTAACAGATTTAGCAAAATCAACAAAAAGTTGTTGAAAG
TGGCACTAGCTGATAATAGAGACTCACATCCAAAATTCACTCTCTCTTTGCGAGAATGAT
AACTCACTATTCAACATTTAGCAGTTTGAAGTAAGTTAGCACAAATACATATGTAAGAGA
CGTTGCCTTCTTCTCTGCAACGACTTGATATTAGCATGAGTTATATTTCATGAACTGTGG
AATGAGTTAAAATTTGATATGGAGAACTCGTCATTATGGAAACAAGCAGGAGCTTACGAA
TGCCAGCAATCCTAAACTACACATATTGTTACAATTAGGAAACAGACAGATTCAGCCAGC
TATACTTAGGCCAAACCAAGGCAAAGTTAAATCAAGCCTTGGAAATTAAAGTTGAATTAA
GAGCATTCAGAACAGTTTTGGCACTACAAAATTCAGCCAGCTCCCATCCTTGCCCTTGTG
GATGTTCTTTATATGGATCAAGAGTAGACGGGAAGGCATCCATCCCTACTGCCACATATG
CATACCTAGTGCAGATGAGGTTTCCTTTGTAGACGAACCAGATCCTGGAAGAGGGGTTGG
CCTTCCGCTGCACCCTCACCGCCTTCTTGGACTTCGGCGTCCGCGACTTCCTAGCAACCA
CAGACACCATATCCATCACAATCACAATCACAAAATGTATCTTGTATCACACCATATCTA
GCTAGGAAATGTTATCTTGTACGTATCGATCATCCCTACATCCACACGCGTGCGCACACT
GACACTAGACGTATGAACCTACTGCAGGTTCAAGAGAGTGCTAGGTAGGCGGGTACCTGG
TGTATCCCCGGTCAGCAATGGCGCCAATGACGATCTCGGTGACGGCATGGTCATCGAAGA
GCTAGACCAGCCCCCTCGCGGTGTCGTCCTCGGACATGACGACCTTGCGCGCCTGAACCT
GCTCCAATCGAATGCGACCACTCGTTCAGCTCAGCGTCCCGGCGGCGGTGGGGATCAAAA
TGAGGATCGCCTCATACCATCAGAAAAAACGAAGGGGGAGGAGTTGACTTCCGCAGATGT
CGATGAGGACGTCGAGGGCCTTGCTGGCACTTGAGGAACATCATGCCGTGCCCCTTTCAC
AAGCTGATGACCAGCACCTCCAGCTCGCCCTCGCCCTCGCCCTCGCATACCCGGTACGGA
ATGCACCCCACCACGATGCGCCTGCCGGTGCTCGCGCTGCACCGCTACTGCTCGCGCCCC
TGCCTCACCACAAGAACTGCCATCCTTCGAATCTTGAGCTGGCTCACATGCCTGGTCAGC
GCCACGCCCATCCCCGTGCACGCGTGACGCAGCTCCCCGCGTGACGAGGGCTCGTCCTCA
TCCTCTCCCATGCCGCGGGACGAGGGCAAGCAGAAGTGGCTCGCGCTGGGCTCGCGCCTC
GGCCTTGGTGCGTACGGTCGTGGAGGATGAGGAGGCAGAGGAGGACGAGGACTGCGCGTT
AGCCGGCCACAGCGGAGGCGGAGGGAGAGGAGGGGCACGAGGGGCATGGGCACCGAAGGT
GGCGGTATCCTTGATCTGGATCTGGGAGAGGGAGAGAGAGGGGCGGCGGTGCGTAGGGAG
GCGGGTGTTTCGTGCTCTAGGTTTAGGTAGGAGAGGGAGAACACGTTGGATATGTAGGAC
ATGGACAGCTCAGATGCCTTCGGTAGGGTGATCCGTGGGAGAGTGATTCTGCATTCTTAT
TGGTTTGAGACATGTGTCACTTACAAACTTCTAAGTGCTAGAAAGTAAGGGGATTTATGA
AGCAACTATCAAAAATATCATTCAAAATGGCAGCACTAAATTTTCCTCTGAAGTTATGCC
ACATTTTATGGATAAGAGCAACTCCAACGCGCCGATCCAAGCAGACGACGCTTTTGGCCG
CCTTTTGTCCATTTGGATCGATGGCCCGCTCGGTGTCCGCCCTCTTTAAAATAGTTTGCT
CAGATGACATCATATTTTGCACAAGTTTGCATCGTGTAGTGACAAACGATATTACATAAG
GGAGTTTTCATTTTCTTTACACGAAACTTTCATTGTCCATTTTCCGACTGTCCAAAATAA
TTTTTTTGTGAATAACCTATCAAATATTCATTGCACAATTGGACCGAATCATTTTTCTAA
AATATTAGGTTATATTTAATGTACAATCGACTAAATGGCTGGGTGTAAAAAGCTGTGAGA
CACCTCTCGTGAAAAAGACAAATTTCCCCAGATTTAGTAGGAACCGGCTCCAATTTGAAC
TGCAGCTACCTCATAGATTGCTTTTTATTTTTTGCAGAAATATTTTCTAGGTATAGAAGT
ATCTATTTAATCATACAAGCATCAAAAGTTTTCAAATTTTCAGCCACTAGCTATGAATGG
GCATGCCCGCCGTTGTGACCGCATTTTGAAATGGGCATGCAAAATAATAAAAAAGTAAAA
CTTTCGCAGTGTATCATTATATGTGACAAAGTTACGAAGAAAAATAATAAACTTGTAATA
CGGTAATTATTTTTAAAAAGTGTTCTAAAAAATGAGCTATCATGTGTGAANNNNNNNNNN
NNNNAAGCCAAATGATCAATCTTATGGCCACATTCATGACATAGTTTGCTCAAATGATCT
CATATTGTGCACAANNNNNNNTATTGGAATGACAAACAATGTTGCCTCATAGATTGCTTT
TTATTTTTTGAAAAAATCTTTTGTAGGTACAAAAGTATCTATTTAATCATATAAACACCA
AAAAATTTCCAAGATCCAACAACTAGCTAGGAACGGGCATGCCCGTCGTTTTGACCGCAT
TTCGAAATGGGCATGAAAATTTCAAAAAAAATTGAAAAATTGAAGAATATTCACATTGTG
TCATTACATGTGACCAAGTTACCGGGAAAAATAATAAACTTCTAATACTATATTTATTTT
TAAAAAGTGTTCTCAAAAGTGAGCTATCATTGGTGAAGATTCATGACTTTCGAGCCAAAT
GATGAATCTTATGGCCACATGTATGGCATATTTTTTTTAAATGTTATAATATTATGCACA
AGGGTGCATCTTGAAATGTTAACCAATGTTGCATAAGGAAGTTTTCATTTTCTTTGGACG
GAAAATTCATTTACAATTTTTCGAGTGCCCAAAATGAGGTTTTTTTTGTGAAGGACCAAC
CATATATTTGTTGCAAGATTGGACCAAATCATTTTTATAAAATACAAGGCCATATTTAAT
GTACAATTGATCCAATGGTTGGATGTCAAAAACTTTTATCCACCTCTCGTGAAAAAGACA
AATTTTCATCGATTCAGTTGGAAGCGGGTCAAATTTGAACTGCAGTTGCATTATAGTTTG
CTCTTT