morexGenes - Barley RNA-seq Database

Contig contig_64626
Source Contig contig_64626
Contig Data
|Contig Location|
|Microarray Probes|
|Predicted Genes|
|CDS Structure|
|DNA Sequence|
morexGenes
Links
Map Locations of contig_64626 (6202 bp)

Morex x Barke POPSEQ 2013	Oregon Wolfe POPSEQ 2013	Morex Genome Release 2012
	No map location	No map location
Predicted Genes from contig_64626

Gene ID	# CDS Predicted	Max CDS Length	Probes in Cluster	FPKM by Treatment	FPKM by Replicate	Top Rice Hit
MLOC_73877	4	1822 bp	MLOC_73877.1	Available	Available	LOC_Os01g54590.1, FRAME:-3, EVALUE:1e-37, 13101.m05740 protein ras-related protein, putative, expressed
CDS Structure of MLOC_73877

Contig Sequence (6202 bp)

>contig_64626 6202 assembly3_WGSMorex_rbca.fasta
GGGGGGGGGGGGGGGGGGTCCGGTTGGCAGCGGCGAGGGGAGTAAGGCGTGGCGGGGGCT
TGGAGCAGCGGCAGGGGCGGAGCCACCCAAGTCACCCCAGGGGACGATGCGGGGGCGCGG
TCCTTTTTTCCACCCTAGCCTATTTTGTATTTTGCGTTGTATGATTGTCTCCCATTACAG
TTGCATGGCATTCAGATCTAATTTCTCAATTTGCAAGTTCCAGTAGCATGTGAGTCATTT
GTTGATGGACAAAACAAATTTGTGTGAGCTGTTTCCTAGTGAACACTCTATTCTCAAACG
GGAATCACAGAGCTATCATTTTGTCCTATCATTCTATCAATTAGGCAAGAATTCCCTTGA
TGAACCAAAGACTTATGTATGTCTATAGTCTGTACACACAGCATAGCAAAAAAAAAAAAT
CAAATCAAGACTGTTATTGTCACAATTTGTACTGCTCCTTATTTTCCGCAATCAGGTTTT
CGTCCTATAACCTGTGTCCGAGCCGAGTGTAGGCAGTGGGTTTCCTGATGATGCATCGAA
ACTGCTCCTTATTTTCTGCATCCCCTCTTTTTGTGTGAATGTTGCTGCTCTAAAGTGGTC
TCGATGACCTGCTGCTGCAGTTGCTGGCTAGACAGCTAGCTGATCGAAATCATTTGTATC
GTGCTACAGGCCAGATAAGTTGGGAACCAACTTATGTTGTACGAGTGTAATTATACCCCC
ACATGATTCAGAAACGTAGTGATTCTGTGGCAATTTCTATTCTGAGATCTAGCAAGAATA
ACCCTCTGCAGTGGTCATTTCATCGCCAAGGCCACACCAACAGATCTTCCAAAACCTGTG
ACACACCTTTCCTTCTCCAATCACACCCCTCGCATGGTCACACCAAGTGTGCTGGTGCAT
AATCCAACAATTCCACGATGCATCTCTCCACTGGTTTATGTATGAACTCCAATAAAAGAA
GACACCACAGCCACTAGAAGTCTAGAACAACAACAATGGTTTCAACCCCAAACCACTAAA
CTCTAAGATGTAAGAAACGAAAGTCCAACAGCTAAATCACAAGTAGGTGTCCGATCTAAC
CTAGAGGACGAATCAAGTGAAACGCAGACCTGAGTTGGGGTACCAAGCAATAGTACTTCA
TTTGGTATTTGCCACTGCTTTACTACTCCACTCCGATCCACACTATACCAAGATCGTCTA
GACTGGCAACAAAAATGAAGCAATCACCAGATTACCAGCATCACCAAACTAATTTGATAG
AGCAAATGAATGGCCAAGCGAAGGTAGCATCCTGGGTCCGAAGAAACAGATCAGGAAGCA
AGCAAATCCATACTGGCGAGCATACTACTACCAGCGATTTGAACAGCTACTAACAGGAAG
TGGCAGGAGTTAGTAATTAAGAGATGGGAGGCGAGCAAGCACCTCTCCTGGCCAGCGGTG
TCCCAAATCTGGGCCTTGACGACCTTGCCGTCGACCTGGAGGCTGCGGGTGGCGAACTCG
ACCCCGATGGTGGACTTGGATTCGAGGCAGAACTCGTTCTTGGTGAAGCGCGAGAGCAGG
TTGGACTTGCCGACGCCGGAGTCGCCGATGATCACCGCCTTGAAGAGGTAGTCGTAGTCG
TCCTCCGCCCTGTAGGCGCCGCCTCCGCTGCCCGCCATCCCCTTGCCTGTCTCGCGGGTC
CTGGACCTTCCTCCTCCCCGGCCAGCTAGTGCTAGGCTCTGGATCTCGCGGGGTCTGGCT
GGGTGCAGCGTTGGCGTCGCTGTGGACGACGACGGAGCAGTAATGGGCGACAGCGACACC
GTGTGAACTGGGTTTGCTGCCTTGCTGCTGCTACGCAGTCGTAATAAATCTGAAATATTT
ATTTGGTGCGCCGTTCTTGTGCACGAAACCCCCTGCAGTTTTATGATTTAGGCTGTGTTT
GGTTCCAAACTATTTTTAAAGTATTTCAAGAATACTACAGTCAAAATACAATGATTTTAA
ATACTTTGAGGTGTTTGGGTCTGATTAAAATTGTAGTATTATAAACTACAATATACATAA
AACTGTAGTATTTTTGCAGTATTATTACGACACTGTATATTTCGATTGCCAAACATGTCA
TTGTTTTCATAAACTACAGTATACATTGTCATTGTATAAAAAATTGTAGTATTAAAATAC
CGAGGTTTAGAAACAAAACATTGCTTTCAACTAAACCTTAGTGTAAAATTGTGCTCTACC
TCGAGAGTCAAGATGTAGATCCATTTGGAACATGTATATTTGAAGATGCAAAAGTAGGTG
CTATAGAATTTACATCATCAAAAAGTGATTTTATATTTTTAAAAAGGTTTCAACCTCAAC
AGATGATGTAAAACGATAATGTAAATGGGCAACTCCAATAGTTGATGTAAACTGGAGATG
CAAAACTGACCGACCGTCGCACGGCCGCTGTACAGCCGGCAACGGTTGCAAGCGGCGGGG
ACTGCACAACTAAAGAGATGGCCGGTGTCGTCGGGAGCTCTGTGTGGCAGGCGTGCGTCT
TCGCACGGCCGGAAGAACGGCAAGGCTTGCGGCCATCAAGCAGACGAAGTGGCGTGCCTT
CACTATCTCTCGCGGGGGGAGGGGGCACGGGTCTAATCTTGGATGAAGCCTACCCCATCG
TAGACCTCACACGCGAAGGCATTTAGGCCAGCCGCGGGCGTCGAAGAAACTTCGATTCAT
CGACGGCTGAAACTGAATCGACGGCTCTGGGCGGCGCCTGGGCGAGGTAAGCGGCTGGGG
ACGAGGGGTGGGGTGGCGAAGTAACGGCGGGCCCGTGTGGGCGTCGGGCGGTGGACAGCG
GCGACGATTTGAAGTGGATTTGGCTGGCAGCGGAGTTGGGCGGCCGCAGCCGGTCGCGCG
GAAGGGAAAGGAAGTGGCGGTTGGGTGGTTGGTGGACGGACGCGACTTTACATCTCCTCG
AGTTGAAGATGCAAAATTGCACCACAAAGTGGTATAGGATACATCTCGCAGATGTATTTT
TTTTGTATCTGCATAATGTCTTGAAGCGGCGTTTTGGGGCCTCGAAGCTGCAAAAGCTAG
TTATTTTTTGCATCTACATCTTCTATTGTAGATGCTATAATATCTTTGAGATGCTAGCAG
AGAACGAGAAATAAAGTGTATTCCCTCACTTTGTATTAGTTGAGGGACTAGTAGGTAGTA
GCAAGTTCATCACAAGGTGTGGCTCCCTCGCATCGCCTCCTCCAGGACGATGGGGGCGCT
AACCCTAGCCCCTGCCGCCGGTACCCCCTTCCCGTTCTCATCTCCCCTCGCAATCCTTAA
AGGTGACCGTCGGGTAAGTCCATGTGCCGTCGGTGAAGGGGACGACAGGGATTTCGCGAC
ACGCGACTGTGGCACGACTTCCTATTGGGGCGGTCATGGCGATGCGAGATCTTCCTACTG
CGACTGATCCTCGTGGTGGTGCTCCGGGGACAACATGGGGATGGCGGACTTGGTAGAGAT
CTACTACACGAGGGCCCCAAAGCAGCGGCTCCGGACGCGACGGCGATAGCATCGTCTCCA
TTGGGGATAACGGAGCAAGAGGTGGCTTCATTTGACAGTGCCTAGGGCGGTGGATCAAGG
GATCTCGTAACTGGATTCGTCGCCGGAGTCACGTGGCGGCTGAGCTTTCTCCGGTGTCCA
CGACGCTTGATATGGGAGACATGTAACCTTCCAGAGTTTGTGGATCGGAGGCCAGTTGTG
CGTTCACGGATCCGCTCATAAAAATCGTGTCGACTTCGGTCTTGGCGGACGATGAATATT
TGCATCATTTCGTTCATGTGGTTGTCTTCTTCCCATCCATACTGCTTTGAGGGGAATCAC
GGATCAGGGTCTTGTGGATCGGACGATGGCGACACACGGAGCCGTTTTCCCTTCCCACGG
GCATCGATTTTTGGAGCATTTGCTTGCCGAGGGTTCCTAAGGTGGTGCGGTGTGGTCTTC
ATGAGACAAAGACGACGAGTCTGAGTGGTATGGTGTAGCCGGGTCTTGACGACGGACTCT
TATGATGGTCGAGTGCAGGGCGGTAGCGCTCACATCATGGTGGCATTGGCGGCAAGCTAA
CAAGATCATTTCATTGATCATGCATCGAAGATAGGTTTGCACAAGGCGTAACGATGACTT
TGAAGCGTGCACATGTAGTGTGCATTAACGGTCTGCTGGATCGATACTTCTATTTTAGAT
GGTATGTGTAGGGGTGAGGTGAGGAAGACGACCCTCATCATGACCACTATTATCATCAAG
TTTGTAGGGAGAGTGATTTTTGTCGCCCAAGGATTGATGTTTTATTTTGTAAGGTAGTAT
TGAATAATATTTACCTAATAATAAAGCAAAGACGGCTTCTGGTAATACGTCGTTGATGTT
TTTATAAAAAAGTCCATGTGTTTTCAACTAATTAACCAACGGTCCTTCTGTAAGTCAGGT
CAAACCATTTTTTATATTTTACGCAAAACCCCTATATTTAATCCAAACTAACCCGCAGTC
CATTTTTAAATGACTATGAACCGTTTTTTCAGTTTTACATAAAACCCCCTAATATATGTG
TTAATCATCTCGCATCTATTAAGAATTAATATATATTTTTAAATAAACATATCTCTTAGA
CCGTAACTTCAATTTTAACATGTTATACATGAAATTTGATTAAACAAATGTGTAGAATTT
GAATATGGCATTATTTTACATGTTCATTATTTTTAAAATGCAATTTATGGCGCAACTTAA
TAGATGATACACGGTACGTCTTTATTTTGTACAGGCGTTGGTTGGCAAGGAGCGAGCGAA
GAAAAAAAAATTATAGTCCTTGGCAATGCTATATTTGTATGAGATTCTCTCTTTATACAT
GTTGCGCGATCTAGGACCGTACGTATATATCTTATTTTTGTGAAATCTATACGTCTTTAC
CATCGGATACTATCTTTTTGTAGTGAATATATAAGCAATTTTATGATGTACATTCACTTA
TAAATTCATGAACATTATAAGTACATCATGGTTTATTTTAAAAATGTTCGAACTATTTGT
GTGATAGTCATGAACGTTAATATTGAACCGATAAATACGATCTTAATTTGTGTTTCATTC
GATGTATGTGAAAGTGATACATATAGGCTTTCTTAAATAAAGTTAATTTATAGATCGGCC
TCGTTAGTATGATCGTAAGTGCGTGCCCTCAATATGAATATATGATGAGTCAAAATCAAA
ATTGAATCAAAATTAAAACAATAGTTTAAATAAAATAAAATGTTTACTTCCGTTACAACG
GAAATTTTTGCTAGTATATTAATAATGATTATTTGATGTAGAGGTAGAAGATTCAGCCTC
TCTTTAAAAAAAAAACATGTTCACGACAATGATAAGAAATTTAGTGGTACACGCACAGAG
CTTTTGTATCTTCCAACCAAACAAACAGATAAAAAGTGCCAAAAGGTGTGGCGAACAACA
CATCAGTACTTCATGCACTTGTGAGAGGAAGATGTTAACGTAGGATGTTGCTGTTTGGGA
TAGTGTTAACCACGCCCAAACTGAAAACGGAGCGATTGAGCAAAGAGGGGGTTGCATCCG
TCCGTGCATCTTCACAACCAAAAGCAAGAAGTTTGTTGGCCGGCGCCATGATAATTGAAT
CTAGAAGGGGTGTAGCCGGAAAAGTCCTTTGCCTTTCGTAGACAGTGCACGCGAGAAGGA
GAAGAAAAGCGGTGACGCCTCCTCGTTGGTTGGTGCGTGCGAGGCGTGGGGGAGTCCGCG
GCGCGCGGGCTCGGCTCGTGATCTGGTCGGCGCGGTGGATCCTGGCGCCGTCGCGTCAAA
CGGCGTGCGCTGTGTCGACCCCGTCCCCGTCGACGTCGGTCACTGGTTTCTCATACGTGT
GGTGTCGAGGAGAAGGTCCACGGGACACGGCCCCCGCCGTCTGCTTTCCCGTGCATTGGT
AAATGCGGCTACGGGGAATGCCAGCGGCGCATCCCAGATCCTGCACATGAACACATCGGA
CCCCGCGACCCGAATCAATATCATAGCGCGTCCACGGGATCTCAGTTTCCGGCCCCGAAT
ATGTTATACGTTTACACGGTCGACAAATATGTTAGAAATTAATTACTATATTAATTCAAG
GGATGTGTTCAATCCGAATAGTCGTGTCTCCTCTCTCTCTCCATTGCCAACAGTCGGCTG
TTCTGGAGGGATGCCTCCGAAC