Contig Data
morexGenes
Links



Map Locations of contig_64569 (4412 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_64569

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_73852 15 4324 bp MLOC_73852.3 Available Available LOC_Os01g50622.4, FRAME:+1, EVALUE:5e-29, 13101.m05270 protein DNA-binding protein DSP1, putative, expressed





CDS Structure of MLOC_73852






Contig Sequence (4412 bp)

>contig_64569 4412 assembly3_WGSMorex_rbca.fasta
CCATGACAGTTGGTTCTCCAACCAAACACACCCCTAGTCTCCCAACCTCTCGCTCCCGAT
TCGTCCTCTCTCTCGATCTCGCAAGAAAAATCGCCGGCGCCCCTCCCTGCCCCACGTCCA
CGTCCCCTCTCCCAGTTTCCCCACCTCTCGCTCCCGATCCATCCTCTCTCTCGATCTCAT
GAGAAAAATCGCTGTCGCCGCCACTACACTCGTCTGCCGTCGTGGCCGACGTCGCCGAGG
TGCTCGACGTGGCGAGGCGTAGGAACACGGTGGCCTGTGGGCAGGTGGCCGCCAGGGCCA
GCGCCGCAGTATTGGGCGCGTTATGGGAAGATCTTGGCGGCAATGACCGCGTTCTTCCTG
TTCGACAATGAGACCTGCCGCTGCATTGCCTCCTCGACGCCTCCCAAGCCCCTCGGTGCT
CTCTCACGGTGACCTCATGGCGTTTCTTAGATCGTGATGTGACCTGCACTATTATTGTTC
ATACAAATTATTCCAACAACTTTTTGTTGAAACATGATATTAGTTATATTGTTCTTCTAT
GTCATGACGCCATGTGATTTGTTGATGGTCTGCACCAGTCCAATACTGGGTTATTTTTCA
GAATAATCAATGATCGTCCGATGTAAGTTATTCATATGAAATTATGCGCTTTTCGTGACT
ACTATATCTACTGCATATGTAGACATGAAAGATTTAAAAAAAATATTAGACATGAAAGAT
TTCAAGGTTCTATGTATAGGAAAAACTAATTTTCATTCAATTGGAACCATAGAATCCATA
GTTTGTTTGTTTCCTTTGATGTTTCGGTACTTTGATTTGACTGCTTCCAGTTATAGAAAA
TATGGCAAGCTATTTTCAGTTGTGATAACAGAGTGTTCTACTTGTGATTTTCCTACTGTA
GCAAGAGTTGTGTGGATTGATAATGGTTAATACATTGCTGGATAAATATAACTTCTAGTG
AATTAGTATATGTATACATTCCAGTGTGCACAGCCGAGAGTATTTAGAGTAATATGCATG
CAACATCATCTACAGATATTCAGTCAATCACTACTCTGCACTAGAACCTCTTTAACAATT
ATGTGAGCGAACTTAAGTAGTAGTCATTTTATTGGACAAATTAATATAGAAATCAATGGT
TTTTGTGAAATGGACACGTGCATGCGAGGTGGGTTGGCCGAGATCTGCGCCTCCGTTCTT
GGCAGTGCTAGTGCACATCGACGTATCAGAGGGCATGGTCTGAACCCGTGTTTGTTTATC
AGTTCATACTTCATTGTACTTAAACTGTGTCCTCTTGTAATATGAAGATGTTTCTCTTTG
TGGGCAATTCCATGTTTGTTGCATATTTCAGAAAATACTTGGAGTACGCATAGCTCCATT
TCTTCTAAGGGCAATTCCATATTGGGTGTTGATCTTCAAGGTAGCCACAACCTCCTCCTC
TCTATAAACTGATTAATGTTTTAATAGATTCTTATTTGGTCAATCATTTCTCGTGATGTT
ACAGATGAAAAGAAAATTACTTGCTGGAATAATTAATATCGTGGTAGTGGTCTTGCAATC
AAAACAAATATTTTCTTTTAGCAAGTATAGGATTGTCTTCTCCATGAACAAATGGGAGCA
AATGGTAATTTTCTTTAGCACTATTTTACTTATTTTTTGGCATGAAAGCTTCCGACAGAA
GATGGCGAGCACCAGCATGCATTTTTCCCTTGTGCGAATTGCCAACAGAGATGACCAACT
GGTGTCTGGAGGTCATTCTTGCTTGATTTGGGCACCGATGGTTTTCACATCTTCACATCG
AAGCCATCAACGATGATGATCCAGTGAACTCACCTACATCAGGTTGAGTTAAGTGCCTTT
TCCCCTTGTGTGAGTTGTCAACAGAGATGACCAGGACGTATCAGGTGGTCATCCTTGCTC
GATTTGGGCAACGGTGGTTTTTGCATCTTCACATAAAATTCATCGGCAATGATGATCCAG
TGAACTCAGCTACATAGGTACGGGTTGAGTGTGGTACGTTCACCCCTGATCTCATGCTAT
TTCAATATACTTTGTCTTGAAAATTTTTTACCTTCACTATACAAAGTACATGGATTTTTA
CCTGAAATTTACAGTAGCACACCACAAAAAACACTGTTCATCTATCTATTACTGCTGCAC
ATTACAATATGTAGTTTTACATATTCTGTATATTGGTGCTTGGCCTACTCAGTAGGCGAG
TAGCAAATACATGAATATTGATTCAAGAACTGTGGTTCAACTATGAAATTGAACTGTACC
TTAGATATATGATTGAAGGAGTACATGGCTATTAATTCAAATGTACCTTAAGGGTATTTG
ATGGTTTTGGGTCAAGTTTAGTGTTCTCGGTAGAGTTTATTTGAAATATTGCAGCGTGGT
AATCAGTTAATTTCATGTCAGTTTTATCTTCTCTGACAAATCACTGGTATGCCTCTACTT
CCATGACTTGATCTTTCCTTAGCAACAAGGCCTCGATGGTGCAGGGAGAGAACTCCTCGA
CGGTGCCTCCAAGAAGGTGAGACGACATCCACAGACACTAACATCGTCAACAGGCAAGCT
TTCGCCCGGAGCACCTCCCAATACCACAACCCCATGCAAAACACCTCCACTAGCCCGCAC
GCCTCCCACGAAGCCAACATGCCATGACCACACAGAAGCCACCACAAACCTCAACGCCGG
CCAGAAGAACCAGCGAGCCGAAGCCCGCGACACCTGCCATCTCCAGACGCCCCCCAGGGC
CGGATCTGGCTGGGGGCGACAGGCCCACCACCACCAGGGAGCACGACAATAGAGGCCGGC
CACCGGAGCTAACCAACCCCTGCGGCGAGCCGGAGCCTCGACACCACAAGGGCCCAAGCC
CCACGCACCGAGCCGCGCCAGGTCTAGGCCGAACCCAGGGCCGCCACCGCCGAGATCAGA
GCACACCCCCTATCCGCATCAGCCACTCCATACTGCCGCATGCAGCCGACGCCCGGCCGC
CAGCTGTCGTCGCCGCACCGCCGCGCTGCCGCCCAACCCAGATGACTCGCGCCATCCAAC
ATCGGGCGAGGGAAGGAGGAGGCCCGTTGCAGCCTGAACTGATCGGGCTTTGCCCGCCAG
CACGCGGGGGCGGCTGCGAGGGGAGGGAGGCGCAGGGAGGAAGGAGGAGCTGGGCTTGGG
TTTCCCCCCGGCGCAGGAGGGGGAGGGGGAGCCACACAAATTAACTCTGAACACCACCAA
GCTCTCATCTGATTTTAAAGGAGAGGGAGAAATATCCGGCTACGGCGTGCAACCGAGCAA
AAGGGGGAGGGCCCGACAGGAAAAGAAAAGGGTGTGTCGTAGGATGGATTTTGTTTTGGC
ACCTCGTGTTGAAGATAATTTGGTGGATAGTCGAGAGAACTACATTTCTCCCCCACATAT
GGGATGGATTTGGGGGAGCTTGGACTATGAAGGCGCTTGATTATTGTGGAGCCTGCTGGG
CGACCTTTTGATATTTGTACATGCCCGAATGTATGAAGATGACATGAGCTTCGAACTTTG
AGACATTTTATATCATTTGTTTGATTCATTTATATGCATTGTAGCCTGTAGCAAAACACG
GACAGCAGCGAGGAGTTCGTCGACTCTAGCGTCATGGAGGTTGGTAGGTTGCTTGTGCTA
TTATAAAATGATAGAACCTCTAAGTAATTTGGTTTCTGGTTAGTTCGCTTCGGCGAATTC
CAGTGATTGCTTGTTGTATCTGTTTTCACAGTGGAGCTCACATGTGTGCCATATGGTTTT
GTGATAAGAATACGGCACGGAAGAAACCTTAGATGTGTCCAGAATAACCGGGTTTTTCCT
TCTACTTTTGAACCGCATTGCATTACTGGGACTTTCTAGCCAATGCCAACAATTTATAAT
GTGGTAAAGGAGATGACCGAAATGATGGGATATACGGTGAGTTTAATACGAAATTGTCGG
AACTACATACTTTTTGGTATATGTGTATTCTTTTGATAATAATAGTATCTACTTCCATCT
GTCACTCTCATTATATACTCCTGTTCTAGGTACGTTTGGTCCGGATAACAGAAATGGTGC
ATGATGCTTACTACTCTAGATTGTATCTTTCAAAGGTAACACCACTTGAAAATACACCGT
CATTTGAATAAAAATTACGATTACCTCTGAAGTACAACATCATGGTATCTAGATTGGAAA
TGAAGAAGAGGTTATTAGTTTTGATCTCAAGCCATGGGATGCCATCAACATTGCTTTCCG
GTGCAAGGTATGTATTATGCATTTATCTAGAGATTTGAGCTGAAGCACAAGCCTTTCCTC
TTGGAATTGATTTAGAACCCCAAGGACGAGTTCCTATCATCAATGCTAGCTGTACAGTCA
AATGCATATGGTTGTGAGCTCTGCTCTCCAAA