Contig Data
morexGenes
Links



Map Locations of contig_6449 (4611 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012




Predicted Genes from contig_6449

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_73817 2 2227 bp MLOC_73817.1 Available Available LOC_Os03g24020.1, FRAME:+1, EVALUE:2e-137, 13103.m02840 protein ribosomal protein L6, putative, expressed





CDS Structure of MLOC_73817






Contig Sequence (4611 bp)

>contig_6449 4611 assembly3_WGSMorex_rbca.fasta
CAACCGACGATATAAAAAGCTTCAACTCGCGACAGCGAAACACAAAAAACTGCAATCGTT
GACACAAAAGCTTCAACCATATGTTTGAAAAGCTTCAACCACACACCAACGAGGAAAACC
TGTCATTTTTGCTATATAACTAGCAAAAAGCTTCAAGCGACTTGAAAAAAACTTCAACCA
TTGTGGAAGAAGCTTCAAACGACATATGAAAAATGTTTCAACCAAAGTGAAAAAGGCTTC
AAACCGAAGTTCGGAGGGACAAGCATGTGCACGCACGAGCGTCGACGACGACGAACGGCG
ACGAAGGGGAAAGGGATGGGGTGCTCATACGACAGGAGGTCGGAGGCGCGCGGGGCTATG
CGCCGACGCATGGCGGGAACGAGATGACAGATCTGACGACTATCGCAGTCAGATCGAACG
GCTGTCGCCCGACCGTGGCTGGCCCTCGCGCCCGGCGCAGAGCGGTGCCCTTTACTGTGA
TCTGACTGGACCGTTGTTCAGTTTGTTTGAGACGGGAAGATGCTTTAGCCCGTGCGCTCC
ACTGTCTCGGGTCCGATCGAGGTCTGAAGCGGCTGCCCCCCCTGCCAGCCTCTCCCCCCT
TCTTCTGTGGATAAAGGATAAGAAACCTGCACCGGAACAAGAAGAAGCGTGCACACCGAG
CAAGCGGCGGCAACACCGAGCCCGTCCATGGCGTCCCTCTCCCCCTCCCTCCACCTCCCT
TGGTACCTCTTACTTCTTTCTATACCTCTCATCGATGTCTTCACAGACGAGTCTATCCGT
TTCTTCGTCCCTTTCTTCGATTTGGTTCTTTCTGTTGATATGCACGGAGCGCCGTGGTTC
CACCAGCGCAGGTTAAGGGTTACTCCTGTGGCAGGCGGTCTTGGATGGATTACCCCCTTT
CGTTGTAGGCTTCGCCAAGAATAAGTAGTTCTCGATTCCAATGCTATTGGCTTAGGGACT
GTGCCAATAGGCTGTGTAAATAGATTGGTGCGAGCAGTAAGTTCAGCGTTCTCTGACATT
TAGAACTCGGGAGGCACGTAATCGTGTGGGGGCTTTGCTTGTTGTGTTAGTACTAGGATT
GTGGCTGGGGATGGAGCACAACTGCCCTACTTACTTAGTTCAATGTACCAATTCCTTGGG
TATACTAATAGTACTAAGCCTTATTTTGCTTTGGTTCGTAGGCCGGTAATCTATCTACAA
TATCCATCTATAACATCTAGTATCCGAAATCTTTGTATTCACAAAATGGGGTTGATCATG
AACTTATTCATCATCGGACCATTCTGGAACAACCTCATTACCGTGTATACCGATATTGAT
ATCCCAGATTAGTGGGTTACAAAGTCACCTCCAGGTTGTCTTTTATTCTAGGTCTAGCTT
CCAAAAGCTTCAAATGAAGTATTGCCTTATCCCGCTACTGATAAGCTGAACTCCAAACAA
GGAGTGGATTTTGGGCAGAACTGAAAGAAGTAATTTTAATATCTTATTTTGTTATTACCG
AGCAAGAAAAGCGGAGTGGTACTTGGTATGCTAGGTGAATGGTTCAGGGTTATGCATTTA
GCTACCAGTTTTGGATTTTGTAGCTTATATCATTTTGTCCTTGGGCCTCGTCTTTCTAGT
CAGTAAAAATAGTTGTGATTTTATCTTTATTTTGCTTTACTAATATGTCTGTAGCGAAAC
TTCCACCCATGCAATAGAGAGGGAATGGGAAAAAAAGGGTTACTTTCATTTTCATTTTCC
CCTTAAAAGATAGACCTTGAAATAGGAGTCTTAGAAAAATGCTGAATTCAAAGGTTTATT
TCTATAGTATAAGATAAGAAAAAAAAAGCGAATCAAATTCATGGATTTACCACGACCTCG
GTTAACATGTTTTTATTTTCTATGTAAGGGCTTGTGCTTTTCTATGCAAATATTATTCAT
AATATTTTACTGATTTTTATTTTTGTATGAAATAAAACAGCAATTCAAGAACTGGCTTCC
TTGGGAAGTCACGAGGCATACATCTTCGTGTTATCCCTGCTGGCAGAGTTGGTTTCGTTA
GAAAAACAGTGGAATGCAAGGAGTCTAGAATCGGAAAGAAGCCGATTGAAGTTCCATCAA
ATGTTACTCTAACACTAGAGGAGCAGTTTGTCAAAGCTAAGGGTCCGCTCGGAGAATTGT
CATTAAACTATCCCACCGAAGTAAAAGTTGTGAAAGAAGAAACTGGCAAATTGAGAGTAT
TCAAGACTGTGGAAACCAAACGGGCGAATCAGATGCATGGCCTTTTCAGGTAAAACTGAC
AATAGAAACTGCAAATGAGTTTGCCTATTTCACTGTCGTTGCGTCACTGCTCATTATTTT
TGTTCCATATCTTTTCTTGTATACCCAAAGTGAGCTACTAACTTGTGATGCCAGCTTTTG
TCACAATTCACATATACAAGCCATCACTTCTTGCACTCAAGAGCATCAGTATGAAAAAAA
AACCTTAATTACACTGTAATACCACAAGTGCCTGAAAATAAAGTCCTATCACATGTGCTA
TTCGCACAACCTTTTACTCTTACTAGCTCCTAGAATATTCTTGATTCCAGAAAGCAATGT
TTAAATTCTTTACAGGACATCCTGTCTTCTCACTCATAAATGGAGGCGGTCATCTTGCTT
TGTTTAGCTCTAAACTTGTCCAATGTAGGTGGGGAGGAAACAGAGAAAGTTGTTGTAACA
TGTTTGCTAAAGATTTGGATAGAAGTATTTATTTCCTACATTTGGTACCCAGTTATCTAT
TCATACCAAGGCAAACAAATCTAGTTTAGGCGGGGAACTAAATAAATGGAAAAGTAAGAT
ATAATTTTTGTGTAGTGTCAAGGGATTTGCCACTGCAACTATTTTTTATGCATGATGATA
GATTGATACGAGACCAAATTTTGCTCCCTTCAGCGTTTGTGCACATGGATCGATCCCTTA
ACTCTTGACTCCTTGAGTTAGGCTTTAGCCAGCCCTTTCCTTTTCTTTTCGTGTCACTGG
TATCTGAATTTGCTGTCTTTATCGAAAAATCTAAATTTGCTGTCGTCAATTATAAGAGCA
TAAGGTTCTTGTACAGAAGTAGTATGATGTTTGTACATTCATTCGCTAACTAAGTAAGTA
TAACTAACCATTGGTTGGATCCTCTTAGATGAATCATCTCGAAGTTGTTCTAAAAACACG
GGTGCAAATTGTTGTTAATGCAGAACCCTGACAGACAACATCATCGTGGGCGTGTCAAAG
GGATTTGACAAGAGGCTTCAGTTAGTGGGGGTTGGGTACCGTGCGACAGTGGAGGGCAAA
GACCTGGTGATGAACCTGGGATTCTCGCACCCTGTCCGGATGGCTGTCCCAGAAGGACTT
CAAGTGAAGGTGGAGGAGAACACGAGAATCATCGTGAGTGGGTACGACAAGAGCGAAATC
GGTCAGTTTGCGGCCACCATAAAGAAATGGAGGCCTCCGGAGCCATACAAGGGGAAGGGT
ATCCGGTACCAGGACGAGATTGTCAGAAGGAAGGAGGGCAAAGCTGGGAAGAAGAAATAG
AAGTCTGTTTATTTGTTTGTTTGCATTCCATACGTACTACTTTTGTTCCGTTTTCCCTCT
GCAATCCACCATCTTCTGAGTACTACCATGTTCTTTAGCCCTTGCACAATTTATAGAGAA
AAACGTTACAGTTTACGCCATGGCGATATTTGCTCAGCTGGTCGTGCTGCGGATTGCCAA
TAGTACAGGCGCATCTTTGAAATTTTGCCTGGTGGCAAGGCAAGAACTCAATAAAGTCGA
GTTTTTGCTCAACGGCAAACACTATGAATGGAAATTATTAAAATCGCTATTTTCCTGGAC
ACCTGGTAGTCACATGGCCTCGGCGACGACTGCAGGGAGAGGACCCGACAGTGGAGCATG
ACAACCGTGAATCACTGCAGTCATGTCATGAGATTGCTAGCACGTGGTCAGCAGTCTTCA
AATCATTCGAGAAAAGAAAAAAAAAAGGAAAAAAGGTGTTGAGATTGCTATTGCCTATTG
GCGTGGACTCCCATCTCCATGCATATAAGGGCATCTTCGACCCCCACCTGCAAATTCCCT
CCGGCATCCGTATGTGGACTGCCCTGTGTGGCTGGCTTGCAAATTTCCTTGTGGCTGGCT
TGCAAATTTCCTTTGGCATCCGTCCGCTGACAGGATGATCAGTCCGTGGATAAGAATCCG
CAGACCTGCAAATTCCCTTCGGCATCCGTCTGTGAGTTGGCCTGCAAATTTCCTCTGGCA
TCCGTCCGCTGACAGGATGACCAGTCCGCGGACAAGAATGCGGGAGCCGATCATCCAATG
TTACATGTATATGTCGTTATTAAAAGGCAATTTAAAGTTCAAATTTAGTTCGATCCACAT
AGCGCCCCAGATCACACCAACGCCAGATATCATGCCCCATCATAACCAAAAAGAAGCAAG
TATGCTTAGCTTCTACATGGCTGAATCCAAAACAACATCGGTCTAGCAGCTTGTGAAATT
TTCTGTCTTGCCGGATCAGCAATCCCAGCCTTTCTTCCCGATCAAGGTGCCATTGTGGCC
GCATAGGCAGCTTGCGCCTTCAGCTCTGCCGTTGTTGGAAATATGCCCTAG