Map Locations of contig_64382 (8723 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_64382

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_73777 1 825 bp None Available Available None
MLOC_73778 4 1586 bp AK366903 Available Available None





CDS Structure of MLOC_73777






CDS Structure of MLOC_73778






Contig Sequence (8723 bp)

>contig_64382 8723 assembly3_WGSMorex_rbca.fasta
TTTTTCAACTAAATTTAACTTATCGACAAGAGGGTCGGTTGCAATTTCCGGTTCACATAC
CTCCTAGATAAAAATATATATCAACTTGATGGGCATAATTTTCGTAAAGACGAGATGCAA
CAAATAGTTATAAAAGATATTATACCACATCCGAATCATAAACCGGACGAGGGCCGATGG
GGACGGATATCAAAACCATGGCACTACGTATAACAAACAATCATACTACAAATAAGAAAA
TCATACAAGCAACTATCTAAATCATAAAATAAGATTTTTTTTTCACAATAAGGATAAGAA
CATGAGCCTCACCAAGGTGGTGCCGGCGGTGGGCCAACGCGTGCGATCGACGGCGGTGAG
GACGGGGGATGGGAAGGCACTAATTAAATCACACCTACACATGAAGTTAATTTAATCTCA
GATTGCATATTAATCAAATAAACTCCCACATAATTACTCTCAAACTAAAATCCATAACTC
ACAATACTTATAGAGCATGAAACAAGCTAAACTAGCAATGAGAGGTGAAAACATGAAGTT
GCTAACCTTTTACAATCCTTGGGTGGATGGGGTGCCTCAAATCTTGACAAATGTTGGCAA
AAACGGAGGATGAGAGCTCGAGCTATGGGGAAAACACAGAGGAGAAAACAGAGAGGATGA
GCTTGGGCTGGACGAAGGGTTTATATAGGGACATCTTTAGTCCCGGTTGTTGATACAGAT
CGGGACTAAAAGTCCACCTCTAGTCCCGGTTGGTAATACCAACCGAGACGAAATGGGTTC
GCTCGGGCCCCAGCCTGACGCCAGCCTGCCACCACCTCTTTAGTCCCGATTGTAACACCA
ACCGAGACTAAAGATCACAAATGAACCGGGACTAATCTTAGCCGTGCCCCCGGCCGCTCC
TAGCCGTTGAAACCGGGACTAATGATCACATTAGTCCCGGTTCAAAACACAACCGAAACT
AATTAATGCTAAAGACGAAAGATCTGTTTTCCACTAATGGAGTGACCTGCCAATCAAAAT
TGAGATGGATTCTGTTGTTGCAGTTAAGTTGCTCAGTCTAAGGAGGTGGGTAGATCGATC
TACTCCTTGCCCGTTAAGATAATTAGATATCTTATGTTTTTTCTTGATTCTTGTATTACT
CATGTAAATCGCAATCAAGATGACAAGATTAGTACTCCCTCTGTTTCTAAATATAAGTCT
TTTAAGAGATTTATTAAAGGTCTACATACGGAACAAAATGANNNNNNNNNNNNNNNNNNN
NNTGTCTATATACATTTGTATATAGTCTACTAATGAAATCTTTAGAAAAAAATTATATTT
AGGAACGAAGGGAGTAATAGTTTAGCTAAGTTTGCTTGTTTGGAAGGCACAACCATCACT
TGGAAACGTTCGTGGCCTCCAGTTGTTCTGGAGCTAGCTGTGATTGATTGTATGAACCTT
ATGAGTTGAGTAATACAGTACAAGTGTTTCATGCGCAAAAAAAAAAAAAAGACGAATGCA
TTGTATATATAGATAATCATAATCCACTCCCGTTGTATCTCCATCGACCAGTGAGTCGGG
AAACGGGAAAGATCAAGTACACCATTTTATTTTCCTTGCGTGCTTGAGAGAGACACGAAG
TACAAAACTCATGTTTGAGTAACCTACCACCCATGCGCATGCGTACACCCTCCTTAACGG
ACGCACGCTCCTTGACAAGAGCTTGCACGTCAGCGCGAGCTTAATTAATGGTGCTGAGGG
TCCGGGCCGCCGGGGCTGGACCTCTTCGACTCAGAGTAGGGCATCGCCGCCGCCGCCCTC
CCAGCTGCTGACCGCCGCGCGCTGCTCGACACAGCCGTCCCTGCCAGCTGCCCCGAGAAG
ACGGCGGGGGCATTGCTCCCGCCGGCCAGCATTCTCCGGCCGGCCACCGCCACCTGCAGG
AGGTCGGCCTCGCAGCGTGAGACGGCGGACAGCAGCAGCAGGAGCACCACGGCGCACGTC
ACCACCGGCATCCTCAACGCGCTCGAGCTGGACGCCATGAGAGGTATCGATCGGTCTAGC
TAGCTAGCTAGATTATATTCGCCGGCGAATGCTATGCTCTGCAGCTTGCTGCCTTGCTAT
ACCTCGCTCTAGACTGTGCAGGTGGTGGTGCTGAGTTGGGTACGTAGCTGCACGACGCCG
AGGTGATTTATAGGGGAGCGTCCGAGGCCGGCCGGGCAGGCGGTTAATTTGCCGTTATTC
AAAATATACCGGGCGTTGGCGCCATGGGTGGAGATCGCCGGTGTGTCGCACTCGCCATGA
CAGCGACGAACCAGCGACGAGGGCAATGACCTCACTCACCCAACGAATCATCGTCGTACA
TATATGCGCCATGTTGCAAATACAAATTGACAACTTGGGCGCGGAAAAGGGGCCTTTCTT
TTGTATGGCCCCTCCCGGTTGGATTTTCAGCAAGGAGAAACCTCGCATTATCGTTATAGA
TATTATCTGTGCGGACCCTCACACAACGAACGAAAACGGGGCAACTGCAGACCGAAGTAT
GATTGGATGGTTAGGTAGATAGCAGTATCTCAGTCCATCATAATTCAAGTCCTAGACTTG
GCACTGGTACTCGCATTTTTCTGTATTTATTTCAACCTTTCGACGATGTGCGTTATGTCG
GAGAAGATGTTTCTGTCGACTACGAAAACGTCTATGATGACTTTATCAATTTCAGAATAA
TAAGCCGTCTCAGTTTGATGAGATGCTCATAAAAATAAAATATGTGTATGTATTTATAGG
GATGAGCGTATGAGCGTCTCCATCTATATTGTGTTCAGAAAAAGAAAAACGAGGCAACTT
TATGCTCATGCATGGCCCCGTGTGGTCGATCATATATACGCCATGTTGCAAATACAAATA
AGGCAAGTTGGACGAGAAAAGATGCCTTTCTTTTCTTCGGCCCCTCCATATCAGATTTTC
AGGCAGAAGAAATCTGGCATCATAGATACCCATGCAAACCTCAAAATAGGCGAAAGACAT
CCGTGCATGTTTGACATTGTTTGTTGGACCAACCATCGTTATCGACAGGTTTCGTCACGC
CATTGGAACGACAAGAGAGCGGCAATCAAAATCCGTGGGAACGGGTGTCTTGGGCCAGAT
CACCGCGGTCGAATCAGCAGCCGCCGTAATCTTCGCCCGGATACACATGCATATCTCTCG
CCGCCTCTTGCCACCGCACGAAACTTTGTTCACACCACGACCTACGTAGGCGCGCACACA
CACAATTGATGATATGTCAAAGAGGTTGCGTCCACGCACACACCCATTTGTAACTCCATC
GATCGACCTTACCAAATTGGAGTCTGGGATCGGCAGAGCCATTGCGCTTGGCAGGCAAAG
AGTTTCCCATTCGTCCAACTCGTAAAGGCGAGTAACCACCCTAGGACGTCCCTAGCTAGC
TATACTATGCGTACCGACAGATCCATGCATGCATGACCAAGAGTCCAAGACCACCCCAGT
GCCCAGGTCATGAGCTAGCTAGCTAGCTATAGGGCGGTCCGTGTCACTTTGCACCGGCCC
GTGAATTGTATAAGTAGGACGGGGCAATGGATGGGAGTTCTAGGTATGGCCAATGGAAGG
AGCTCTTCTAGTTCTAGGTGTGGCTTGGCTCCAATGGAGTCCTTGTTAAACTAGCTCACC
CGAGGAGACCCACCCCCCACGACATGCACTACGGCCATGGCCGTGCACGCACGAAGGTGG
CTGGCCATTGGCAGCTTTCCCCCCATAGGCCGTGCGACCCTCGGGCAGCCAGAGAGGCCG
GATGCGGCAACCGGGGGCGAGCCGTATTTGGCCACACCCCTCCGAATTAACAAACATGGA
AGGTACATGCACGCACAGCCACAGCGCCTGCAGCCCAGCCCACCGGCCGATCCAGTGGGA
ACGCAGCTGATACAGTTCGTGGGACACGAGTTGAGGCGTGCATGGTGCCATGTGAAAACG
TGGGCATGCTGCATGCATCATGCATGGCGATGGTGCCATGGCTAAAGGGAGAAGTGGTTT
TTGACAGTGACGGACACAGGTCCCAACATTCGACAAACGCGGTGATCGCCGGGTCGTAGC
TGCTGCAACCCGTAGATAAAATACAGAGTTCCCACGCCTCTGCGCTGATAGCTGCCGAGA
TTCATGCCAATGACGACGGCACCAACTCAACACAGAAAGATGCGAAACGATCCGGACGTT
GTCGTTGTGCGTGCGGTTCTGAGTTGGATCCGATCCCGTTATGTTCGGTATGAGTTGGAA
AAGCAGCACTATGACACCATCGACCTGCCGAACAGCCCACTGTAATCCAACAGAGTTGCT
TTCTGTTGCGAGAGAATTTACCAGGGTACCAGCGACGGCGAATGGCTGCAAAAAGGAAAG
GAGTGGAATGTACAGCTAGTAGGTACAGAAGGGGCACACGGCAAAGGAACTCTCAGCAGG
ATATGCTTGCTACTCTGGGAGGAAGGGTAGCCTGGTGACACCGCTCTGCGTATAGTCCAT
GCCGTCGGAGCTGCCATCTGAATCTGTGAGCCCGGGTGCGGTCTCGGAGGTCTCTTGCTC
CGAGGCGGCAACTTCTTCCCTGTCCGCGAACTGCGGAAGGATCCGTAGGCACGCGTTCGG
CTCCTGTCCCGTGACTTCCCACTTGAGGTTGAACCTTTCGACGAGGTTCACTTGGGAGGA
GATGATGGTCGATGGTCTGGGCAGGAGCTGCATGCTCTCCCCTTTCGGGATCACTACCTG
CTCGACTGCCAATCTTGCTTCCTGTCATCAAAGAAACAATTGGTTTGTTATGCTCACCGA
GAAGGTTGTATCCAGGGCAAGTTGACTATATGATGATGGTACCTCCAAGGCATCGGTTTC
CTCTGATGATCTTACTTCCTCCTTATCTTCAACATCGATCAAACCATCCACGTGATCATC
GACAAGGACGCGAAGTGCCCTGGTAATTTGCACCAGGGAGTTTGTCTACGAAGGAAAGCG
CGTCACCATAGAATCATTCTGCCACTTCAAAAAAAAAAAAAACAGGGCAGTGAGAATGAA
GAGCGCAACTGCGTACCTTAGCAAAGAAAACCGGTAAATCTTCAGATTTCAACAAAGCCT
GAATCTGAGAATTCTTCTTGAGCTTCGATTGCAAAGCAATCACTGCATCAGCTTCACTGA
TGTTATAAGTCAAAGTAATCATGTCTTCCAGCTCCAGTTGTTTAATCGCTTGCAAGGCAA
TTTCCTCGGATATCTAGAACACCCTATCCAAGTTTCAAACTAAGTACTGCAAATTCTACA
AAATATGTATAAACAGGTAATTGACAGCTAACAAAAATCATCAATTATTGACCACAATTT
TACCACTGTCTTGTTGCAGTGAAAGGAGAAGGTAGGTTACATAATTTGTGAACAACTTTA
ACCCCTCACCGTCAACGCGCAAAGTAGCAGCACATGGGAGCGCTTTCCAACAACTAAACT
AGGACTGTCAAACTTCTTTTTTTTTCATTTAAGAACTGAAAATTCTACAAAAGATTTTTA
AACAAGTAATTCACAACTAATAAAATTCATAGACCATTTACCGCAAATTCACCATTGTCT
TGTAGCAGTCACAGGAACAATTAAAAGACAAAAGACAATACTATCATTCTTTTCTGATTA
AGGACACACACACTAGCAGCATGCAGGAGCACTTCCCAACAAGCAAAACCAGGACTATCA
AAGTGGCAAAGAAGACACAAATTCACCATTGTCTTGTTTCAGATGCCTACACCTGGATAG
GGGTGTAGACAACATAAAGAGGTACAAGGTGGCAAAGAAGACCGCAAAGCGAGCTGTGAG
TGAAGCAAGGGGGCGGGTGTATGAGGACCTCTACCAGCACTTAGACACGAAGGAAGGCGA
AAGGGACATCTATAAGATGGTCAAGATCCAAGAGAGGAAGATGAGGGATGTCAACCATGT
CAAATGCATCAAGGACAGAGCAGATCAGCTCATAGTGAAGGACAAGGAGATTAAGCATAG
ATGGCGGGAGTACCTCGACAAGTTGTTCAATGGAGAGAATGAGAGCTCTGCCATTGAGAT
GGACGACTCCTTTAATGATACCAGCAGGCATTTTGTGCCACAAATCCAGGAGTCTAAGGT
GAGAGAGGCTTTAAAAAGGATGAAAGGAGGCAAGGCGATGGCCCTTATTGTATCCTCATT
GAGGTGTGGAGAGGCCTCATAGACACATCGATAGTATGGCTAACTAAGCTTTTTAACCTC
ATTTTTCAGGCAAACAAGATGCCGGAAGAATGGAGGCGGAGTATATCAGTACCAATCTTC
AAGAACAAGGGGGGTGTTGACAAGCATGAGCAAAAATCAGCTTGGTTTCATGCCTATGAG
GTCGACCATGGAAGCCATTTTCTTGGTACACCAACTCATGGAGAGATACATGGGGCAATA
GAAGGATCTGCACATGGTGTTCATTGACTTGCAGAAGGCCTAGGATAAGATACCATGGAA
TGTTATGTGGTGGGCCTTGGGGAAACACAAAGACCCAACAAAGTAAATTATCCTCATCAA
GGACATGTACAATAATGTTGTGCCAAGTGTTCGAAAAAGTGATAGCGACACTGATGACTT
TCCAATTAAAATAGGACTGCACCAAGGGTTAGCTTTGAGCAGTTTTCTTTTTCTTTTCTT
TGATGATGGACGAGTTCACAAGGTTATACAAAGATATCCCATGGTGTACGCTCTTTGGGG
ATGATGTGGTGCTTGAACATTTAGGTGTAGTGGAGATGGGCATGTTGAGATGGATGTGTG
GCCACACAAGAAAGGACCAGGTCCCGAATGATGATCTACATGATAGAGTTGGGGTAGCAC
CGATTGAAGAGAAGCTTGTCCAACAACCGTCTAAGATGGTTTGGGCATATACAGTGTAGG
CCTCCAAAAGCTCCAGTGCATAGAGGACGGTTCAAGCATGCTGATAATGTTCAGGGTAGA
CCAAACTTGACATGTGAGGAGTCCATAGGGAGAGATCTGAAGGACTGGACTATCATCAAA
GAACTAGCCATGGACAGGAGCGCGTGGAAGTTAGCTATCCATGTGCTAGAACCATGAATT
GGTTTTGAGATCTTATGGGCTTCAGCTCTAGCCTACCCCTTATTTTATTAGAAGTAAAGG
CTTTGCTGTTGTTTTTGTAAGGATGAACATAGTTCCATAGAGATCCCCAAAAGTTTGATA
TTATACGGCCAAATAGAATCAACGTCCATACCAAATAAGCATCGTGTTAACAATAACACC
ACCAAAGTAAACCTTAAACACGTAAAAGAACTACTGAAGATCACTGTAAAAAATGATCAA
GGAAATGGTCTATTGAAGAAATTCGTACCCCATAAACATAGAGATTGAAGCCTGCTTCAG
ACACATTAGAGTTCTCTATATGTCCGTTGGCAGAATCAAGATTAAATGCAGAGTCCAAGC
TTGTTCTTGCATTACTTAAGGAAGCAACTTCAAATTGAGACACAATTTTGTAAGGATCAC
GACGAAATTGATCCTTCTGCACAGAAACTTCCTGCTGCACTGAGCCGGTTGAACCCAACT
TACGAATTTCAACATTAGGCATTCTACCTGCACCAACAAAACAAAATCTAATCATAATGG
CATCACAGCCTCATGTATACTATTACTCTGAGAAAATCATTGCATCAAATGTAACGTGAT
AATGTAGTTGATTAGTCGCAAAATTAGAGAGAACCTGCAAGCAGAGCATCTACTGTAGCC
TCCAGACTACGATGGACACGTAACTCAGTTTTTGACACAATCTCTACAGCATATGCGAAT
GTTGACGGGCCCTTGCGCTCTAGGACCGTTTTTTGGACCCTTCTCCTGCTTGCTTCTTCA
TCGCCAAGGGTGACGCTCTTAGAGAAACAATGATGTAAATTAGCAACCATGGTGAAACAG
AAAACAAGTAATATTTGCATCGCTTAGACCATCTCGCGATACTGATTTTGGAGTATGTAA
TTTAGTATGTTCTAAAGCTACACAATCAGAAAATCATACTTGTCTCTAAAGCAAAGTTAA
ATAAGGTTATTTAGATGGACTGCATCACTGCTCATAACTTCAACTGGAATGACACAGTTC
ATCTTGCTGCAGCGTGAAAATACAATTGTTTCGTAACAGTAAATAGAATCAAGTGCAGCA
TGTCATTACCTGTATTCCTCCGACAAGCATATCTAGTGAAGGATTCATGGTCAGGTTCTC
TATTGTTACACCATGAGCGGAGGCAACAAGTTGTATCCCCCGCTGTGCAATGGTGCTAGC
AGCCATAGCCTCTAGCTTAGTTCCAATTTCATCAATGACGATTGCCTGAGGCATGTGATT
TTCCACAGCTTCTATCAACACCTGATCGGCATTAAAGGAACAGATTTAACATACAATGTA
AGTGGTAAAAGGGATATAAATGTTCCGTACTGTATGAAATGGTTTGATATAATTGATAAA
CAAGTACATCTGTTTTAAGTACGTGTGTCAATGAGGAGCAATAGGCTTGTGAGCAGTACA
ATACAGTCATATACAATCGTGCAAACTTCAAAAGGCAACAAGGTGTTAAACTCAATAGAG
CAAACCTTATGCTGCATTTCTTGGTTAGGCACTTGCAACCTACGGGCATTGCCTATTCCT
GGGTGAGGAATGTCGCCATCTCCAGCTATCTCATTGGATGTATCAACAATCATCACCCGC
TTATCGTAGTCATCTGCTAGCAT