Contig Data
morexGenes
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Map Locations of contig_64311 (5398 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_64311

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_73744 2 1326 bp AK363707 Available Available None
MLOC_73743 3 1936 bp MLOC_73743.2 Available Available LOC_Os03g55240.1, FRAME:+2, EVALUE:1e-114, 13103.m06009 protein cytochrome P450, putative, expressed





CDS Structure of MLOC_73744






CDS Structure of MLOC_73743






Contig Sequence (5398 bp)

>contig_64311 5398 assembly3_WGSMorex_rbca.fasta
TTGCTACAACCGGCATCATTTTTTGCTGCAACCGTTTATTAAAAAAGTTGCATACACGTC
ACGTAAATATTTGTTACAATCGGCGTTTGACTTTTGCTACCACGTACCATCAACATCTTT
TTTTCTACTATCACGTAGATTTTTTTTTTGCTACAATTTTTTGTTTTTTGTTGCAACCGT
TGAAAAAGTTGCTGCGTCGCATTGAAATTTTGCTGCATCAAAGGAAAAATGTTGCATGGA
AATTCAACGATGCGAACGCGCGGGGTTAATGGATCACGCGGCCTGCGGGCGGCCGGCTCC
CCTTTCGGACAGCCTGATCAGCCAGCTTCGTGTCACGTATTGGGCCGCGAGATGGGCTCT
GCTGGACATTGGACTGGCGTGCGTGGGAGAGAAAAAGGCATACCTGAGAAAGACGAATTG
TCCATGTCTCCCCGACCTAGGCTCTTCTTCCTCCTCTATATCTTGGGATTTCCAACCAAT
CAATCCCTAGTGAGAGATTGCTTCCGTCTACCTCCTGAACCCCAGCTTCCCTCTCCAACC
CTCCTTCTCTGTGTGATTTATGAGGTACTCCGTTCTAGGTTCGTGACACTTCACCGCAGA
AACAAGAACAACAATGGAGATGTGTAGCGTCCCCTTCTTCTACGTCGCCGCCATCACCTT
TCTGACCGTCCTTTTGCTCCACTCCTTCCTCACCAAGAAGCGACGGCTGCCACCCGGCCC
GGCGCTGGCTCTCCCGTTCCTTGGCCACCTTCCCTTCCTCAAGAAGCCGCTGCACGCCAC
GCTCGCGCGCCTCGCCGCGCGCCACGGCCCGGTCTTCTCCCTCCGCCTCGGCTCGCGCCC
CGCCGTCGTCGTCACCTCGTGGGAGGTCGCCAAGGAGTGCTTCTCCTCGGACCTCGACGC
CACGCTCGCCAACCGCCCGCACTTCCCGTCCGTGCGGGAGGTCTCCTTCGACTACAGCGT
GCTCACCCTCGCCAACTACGGCGCCCACTGGCGCGCCGCGCGCCGCGTCGCCGTCGTGCA
CCTCCTCTCCGCGCGCCGCGTAGACCTCATGTCCGACGCCGTCGTCGCCCGCGAGCTGCG
CGCCCTGGTGCGCCGCCTCGCGCGCCTTACCGCCGGTGGTGGTGGTAGTGCGGCGAGGGT
GGAGCTGAAGCGGCGGCTGTTCGACCTCTCCCACAGCGTCCTCATGGAGGCCCTCGCGCG
GAGCAGGAACACCTACTCCGACGACGAAGCGGACATGTCCCAGGAGGCGCGGGAGATGAA
GGACGTCGTGGACGCCATCGTGCCCCTCGTCGGTGTCGCCAACCTGTGGGACTACCTTCC
GGTGCTGCGCTGGTTCGACTGGCGAGGCGTCAGGCGGCAGCTGGAAGACGTAACGAGCCG
GAGGAACGCCTTCATCTACAAGCTCATCGACAGGGAGAGACAGAAGCAGCAGAAGCAGGA
GGAGGAGCAGGGCATGATCGGCGTCATGCTCTCGCTGCAGAAGTCAGAGCCCGACCTGTA
CACGGACACTTTCATCGCCGCCCTCGTCGCCGTGAGTCTCGCAGCTTTCGTTCCAGCTCT
CTCACCGTTCCGTTCATGCCCTGGTTATATGACACTAATTTTCTCGTGTTTGGATCCAAG
AACCTTCTTGGCGTCGGGACAGAGACGACGTCGACGACGACGGAATGGGCGATGGCGCTC
CTGCTGAACCACCCGGCGGTGCTAAAGAAGGCACAGGAGGAGATCGACGCGCACCTCAGC
GGCGAGCCGAGCCGCCTCCTCGACAAGACGGACCTGCCCCACCTTCCTTACCTCCACTGC
ATCATCAGCGAGACGATGCGGCTGTGCCCGGCGGCGCCGCTGCTGCTACCGCACGAGGCC
GCCGCCGACTGCCAGCTCCACGGGTACGACGTCGCCGCGGGCACGATCGTGCTCGTCAAC
GCTTACGCCATACACCGCGACCCGGCTGCGTGGGGACCGGCGCCCGAGGAGTTCAGGCCG
GAGAGGTTCGAGGATGGCGTCGCCGAGGGGAAGCTCATGATGCCGTTCGGGATGGGAAGG
CGCAAGTGCCCTGGGGAGAGCCTCGCCATGAGGACCATGGGTCTGGTTCTTGGCACGCTG
ATCCAGTGCTTCGATTGGGCAAGGATCGGGGATGAAGACGTCGACATGGCCTCGAGTTCC
GGGACCGTCATGCTCAAGGCTGTTGCTCTGGAAGCTCTCTGCACACCGCGAGCCGGCATG
GATGCTCTTCTTCACAAGCTCTAAACTGAAAATTATTGTAAAAGGAAGCAGGAAATAATT
GGCACAAAAGAGCACACACTAGAAATATAAATGTAGTGCTACTACTATAGTGTAACTAAT
AACCCCACAGTACATACACATTGCATGGTTTGTTCAACAATGTTCTTGTGAATACATCTT
CGCGATATTAATATGTTTTCTTTCTTTGTCGAAAATCTCCGCAGATGCACATTACTCAAG
AAGGAATTTTGGAAACTATTTCACCAATTTTGGAAACTCAAAGAGCAAGAAGTGAGAGAT
ATGAGTTGTACACGAAATTAGTTGCCGTATTACTTGACCAACAAAGGCATCACTTTACCA
GAAGTATAATGCTATTCATTAAAAGACTAGAGTAGCATATTACAATGGATGGCAAATTAG
CCACTTAATAGTAGTTCAAAATTAAGGAGTGTCGCAATTCGGTGCAATCAAATAAAATAC
CAAACAAATTCAGGAAAATCTGGAAATAAAATTGGCATCCAAGATGCCCGAATGAGTGAT
ATGCGTGCAAAACTTCTTTGTGTTTGAACATTTGAGGAGGTCGTGACAAAAAAACAAAAA
ATGGCTATGAAAGAAACTTCAGAAAAGAACACTATTTTGATCCAATTTATTTTCTTGTCT
AAGGCCCTAGAATGTTCAAACACCGCAACCATTTTCGATGCCGAAAAATACCAAATCTTT
TTTACTACCCTCTGTCCCAAAATAAGTGTTTCAACTTTGTACTAGCTCTANNNNNAAATT
GTACTAAGCTTGAGACAGTTATTTTGGAACGGAGGGAGTATTTTGTTAGATTTACTGTTC
ATCAGAGGCAGATGAGCCCAGGCTCATACGCGAATTGCCAAAAATTAAGCAACTTAATAG
TAGTTCAAAATGATATGCTAACGCTGGAACAACTCAATGACTAAACTTAATAATACTTCA
ATAAGTACAGCCGCATTCATGATACTGATGTATCCAATTTACAAATGAGTTTACAGCTGC
ATAAGATCAAATGCAAAAAAGACGACGAGTAAAAACATGTAAGCATACGCAACTGATTCA
TCTGCACACCACACCATTCCAGTCTATTATCAGCTCAAACACATACCATGCATATCCTTC
ATCTTTGTGTCATGTGAACTGGATTGCTTTTCCAAAATCCACTCTGTAGTGAAAAGAGAG
CGAAAGGTAATCAACACTCCAAACTCCAAGTAAGTGTTTTTACAAAAGAATGTGATTCTG
CTACGGGGTTTCACTTTAGTTGTAATCTGATGGTTCACTCATCAAGGGCAAGATATTCTC
TCTGTGCCGAAACACCTCGGCAATTTTAATTACCCTTCAACTTCTCCCCGAGGATTTTGT
TCAATAAAACAGGACTTGCTTTACCTTTCGATGCTTTCATCACCTAGAATCAATTTAAAT
AATATGATCAGCTATAGGGACTGCAGGGGCAAAAGAACATAGTGAAGGGAACACAGCTCC
AGATTCAAAAATATCACAAACCTGCCCAGCGAAAAATCCCTGCAACTTGGTTTTCCCAGC
CCGATACTGCTCAAGTTGCTTTGGATTCTCGGCGAGTACTTTATCTACCATGGCCTCAAT
TGCTGCTGGATCTGCTATCTGTCATATCCAGTAGTACAGTTTTTCACTCAGAAAAAAACC
CAGGCAGAAATTAAAGGCACTGAAATCTCATCTGCTACAGTAGAAGTAATATAGTAAATC
AGAAGGGCGCATCGATTTTTTTTCTCATTGGCTTCAGGATGGTTGTTACTTGATTATTCC
TCAGCACAGCAGGGCCGATGTGATCATAATATCTGACGACTTTCAAACTATTGTGATTCG
AAATGGTTCCAGTGTGACCACATTACCTGAACCAAATCTTTCTCCTCTATCACCGACTTG
ACAGTTCCGCCTTTAGTAATGAGCTCAACAAGAATCTGCAAGGGCAGAATCGAAACGGTA
TTATAAACTAACTGACTAATGGAACCTAACAAGACTGCAAGTTTTTATAACAGGAAGTGT
CAGGAAGGCATGCAAAATATTTCAGAATAACTGAAGTACTAAAGTTCATTCTTGTGCAAT
CTGCAAAAAATTCCCCAGAGGCGGCAGGGGAAAAGATAGTGTTTTTCTTTCCTATTTTGA
AACTGTCAAAATTCAAGTTTTGGACATCAAAATCAGTGTAGCACCATCAAATGGAAGAGA
CTGCAAACAACCGAGAAGTGCTTCAACTAAATCAAAGTCCCAAAGGCGTGACACACAAAC
AACAATACTTAAGAATAGTTACCTCCTTGCCAATCTTCCCACTGATAGTACCATTCTTTA
TGAATGCAATCAGTTCAGAAAGCTCAAGAGGTGTTAATTTAATTTCATCAATAGAGAGCT
TTTCATTCTTCAGATAAGCCGTAATGTCACCCATGATCCAATTAGCAGCCAGCTTTGCAT
CAGCACCACGCTCAAGTGTAGAATCGAAGAAATGAGCAACCTGGGAGGAACATACACATC
TCACACTTTGAAATATACTTCAGTAACATAACATCCATGACAAAGTAAAAATAAGAGTAA
TACAGAAGATAATTACAATATCGTCATTAGCAAGGAAAATAACATCTTGCATGCTGAGCC
CCATGTTCTCATAACGCCTACGCTTTGCCTCTGGAAGCTCCGGCATTGAATTACGAATTT
CATCAATGTACTCACTAGTCAGAACAACTTCAGGAAGATCAGGCTCAGGAAAATATCTGT
AGTCGGCAAGTCCCTCCTTTTTCCGCATTGTAAAAGTTTTCTGAGTGCAGACAATGAAAC
GAATTTAAATATGGTAGAAAAAGACCAATAGGTGAAAACAAAAGTCAACCAGCAAGGTGA
GGCAATAACCTGAGAAGATTCATCCCATAGACGGGTTTCTTGTACAATTTTGTCAGCCTG
GCTTTCTTTGTGAAGAAGAATCTGTCGGGATATCTCATAATCTATTGCCCTACTTATTTC
AGAAAATGAGTTCATATTCTTTATTTCAACCTGTCAGAAATTAGAATTAAAAGAAGCATG
TGATCCCACAATGTCATCTTACAATAGCTACAAAAACTCAGAAGTTATCGCCTTTTAAAA
TACTCCCTCCGTCCCCCAAAAAATATCTCAACCTTATTACAAATTTTTTTTTTTAGTT