morexGenes - Barley RNA-seq Database

Contig contig_64150
Source Contig contig_64150
Contig Data
|Contig Location|
|Microarray Probes|
|Predicted Genes|
|CDS Structure|
|DNA Sequence|
morexGenes
Links
Map Locations of contig_64150 (6576 bp)

Morex x Barke POPSEQ 2013	Oregon Wolfe POPSEQ 2013	Morex Genome Release 2012
Predicted Genes from contig_64150

Gene ID	# CDS Predicted	Max CDS Length	Probes in Cluster	FPKM by Treatment	FPKM by Replicate	Top Rice Hit
MLOC_73686	1	1799 bp	MLOC_73686.1	Available	Available	LOC_Os01g15990.1, FRAME:+2, EVALUE:3e-118, 13101.m01772 protein expressed protein
MLOC_73685	2	1626 bp	AK251161.1	Available	Available	None
CDS Structure of MLOC_73686

CDS Structure of MLOC_73685

Contig Sequence (6576 bp)

>contig_64150 6576 assembly3_WGSMorex_rbca.fasta
CCCCCCCCCCCCCCCCCAGCCACTCATCAACTCAAAAACCTTCAGGTCTACGCCCCGATT
TTCAATTGGGTTTCATCTTCACAAGAGTGGCTGAGTTTTGATGTTGTCTGGTCAAGCCTA
TCACAATCCTCCTCCTTTACTCGCGGTTGGAACCGGCTATGTTAAGACAAAATAGGCGGA
GTTCTCTTTTTCTTTTCTTGACTTGTCATCAAGCTCTAGTTTTCTTGAAATTTCTTTAAG
CACACATCAGTCCTGTAGTCTGGTCTGTAAACAAAGCACTGAATATTCACTGTGTCCATG
TGCTGAGTTTCATACCATTCGTACGTAAGCAATTTTATTACTGGCAGGGCCATACCCGAG
AAGGCGGTGGCCCGGAGCAAAATCCAAATATAGGCCCTTGACATTTTTTATTTTTCCTAC
ATTTTCATATCCTGACATGACTCATACTTGCTAGTTCCAGAACACATTGTGGGAAGTAAA
ACTAAGAGACAAATATCAAGAACTAAAAACTGAACATGTGGAGATAAAAAGGAATGAAGC
AGCCTTCAATTATATAGATAAAAAGGAATGAAGCAACCTTTTATGTATTTGGGAAGCAAG
ATTACGGGCCAGCAGCTTGTGTTGCTCTCGCTTTGGCTGCTCATGTCGATGAACCAGCAT
TAGGCGACCAAGAACTCGAAATCTCCAACTTCAGTCAAGGCTCCTACTGATGCTTATGGG
TTGCACGGCCGACAACAGTCAGCAAAGGAGGTCGAGAGAAATACTGATATGCAGACTTGC
AGATTTGGTATTTGGAAGAATAAAACCAAATAAATATACGAGTGATTGGGAGTAGAGCGT
TACACATTTTGCTGTTATCACAATGGATTATTTTGAGAAAATCGCTTAGAGTTTAATTAG
ACGTGGATTGGAAAGATCATTAATGATTTAATATTTTAAGTAGGAAGGAAAAATATGCCT
GGTGTTTGAGGAAGACGAAGAGGAAGAGAGTGTCGTGTGTGAGGAAAGGATGGATGATTA
ATTCGTTCAAATTCCCACGCATACTAGTTGGGTGAGTTAATTCATTGCTTGAAGAGTAGC
ATAGCACATTACCTTCTTTGATCATACCTAGTACTCCCTGCTAATATACTCCTAGTTAGC
TACTACGCCGGCTGATTTGGAGCCCTGCTGGTTTGGGGCCCCTGTGCAGGCGCACACCCT
GCACAGTTGCCCGGTACGGGCCTGATTACTGGGAGTGGTTCCCTCCCAGATTAGCATTGC
TTGAGTGTACAGCCAGCTACAGTTGCATCCCAAGAGAATTTATCGCCTTTTATTCTTTTG
TTTGAGAATTTTTAAAATGATGCAGGGCATTTGGTGCAAAGATTACATGGGGATGCTGTT
TTTAGTTCAATCCGAGGTCCTTTGTTCTGACCCTTTTCCTCCTGCAGGCCCCTCCAGTTG
TTGTATTCTCTTCTGCGTGTGCTGGATTAGCAGGTGAAGCAACACTCTTCTGTATTTTAA
TATATTTATATCTATTTTATGCTTATAATTTTGCTATCTAAAAATGTGTTCTATTATTAT
TTCCTTGATATCATGGCTGGTAGATTATTTCCTTGATATAATGGAGCTAGACTGTTATCT
GATGAACAGTTATATGCATTTGATGAGCTAAAGTTTCAATTCTATTTGCAGCTGGTACAA
TACCAGCCGTTGCGCAACTGGTTTCGTCGTCCTGTCATGCTGCCATGTCATCGCCCTCCT
TTGCCCGCCCTGCTTCTCACGACGATATGCACAAGAGCAGAGGCTCCTCGCCATTGTAAT
TTACTGGTGCAACAGACCAACCACAGAATTGTAGTGATCTAAGAAATCTGTGCCACCTTA
TAACAGGGGATGCTTTTGTAAATGTTAAGATGTTCATGCAGAATGATGATGACTGACATG
CGCTCCTTTCACTTCTATTTTTTTGGTATGTATCTCTATGTATAGGTCATGCCCTCGGTC
TTGTGTTATTTTTTTTTTTGTATTAAAATAAGTATTGCGGTGTTGTGAAGCAACTTAAAC
TAGCCTGAGGTTCAGTTACTTTCTATTGCAAAATGCAAGCATGCGTTGGTCTATGACTGT
TCAACCTTGAATTACATTTGATAGGGCATGAGTTATGTAAATGCAGTTGTTTGTGATTTG
TTAGCTTGTATCGTATTTACTATTGTTCTAGATGTGCTTGCCCTAAAGGTTGAAACACTG
GGCCTTTGGTTTGTGAACTTTTTTGGGGATATATTTCCGTAGGAGTGGGGCATGGCATCC
CAATCCTTTACTTGTTGCATTCCTTTGATTTGAAAACCGTGGCCTAGTTTGCCAATGATA
GAATTACATAAGCGATTGCTAGTTGAGTGGATGGTATATTGTCTTTTTTTTTTGCGAGAA
GAGTGGATGGTATATTGTCTTTTTTTTTTCTCGAGAACAGTGGATGGTATATTGTCACCG
CTGATTCTGTCGCCGATTCGGTGGTAGTGGCTTGTTTGGACGCCACGTAGTAGATCCTGG
CCGTTCCCCGGTTCGTACACTGCATGCAGCTACGTATCTGTATCTTGTAGGAGTGTCGTT
CATTGGATCGTCGCGCTTGGTTTTGGATGCCATGGAACTCATCATTCGTGAGGAATCGGA
AACGCACTCCGCCTGTCGATGATGATGCAGTGCACTTGCGACGTGCAATGCATCTGGCTA
CCCACCAATGCCTGCCATGAACTAACCGGAGCTCGATTGGAATCAGTTTCGGGGTCTGTT
GGTGTTATTTCAACTTGGAAGCATGCGTGAAGAAGTGTCCTGCATGCTCCCGGAGAATTT
GTAGGAGAACTGGGCGATGAGAGAGGCAGGATGACGAGAGGATGGCGCGAAAAAGAAAAC
ACTGCTGTATGTACCGCTCGGCCCGGCACACTCTTGGTGCCCACCCCTTGTCCCCGAGCT
GCGGTTGGCCGCTGGCGCACAGCAGCTCTCCTCCCGGCTCGTATGCCACGCACATTTTTA
AACGTGACACGGACGCTTACACCTCCCCGCCCGTAGCGGATGCCGTCCCTGTCTAGCCCA
GCCTGTCTCGCGCTTGGCTCTGCCCGCGCTCCCGCTCCTACAAATTCTTGCGCTCGACCA
TCCCCTCTCCGCCAACTCTCTCGCGCGCACTCAACGAGTGACCCAAGCGTGGCGTCTTAT
CTCTCCTCCCACATACATGGACCGCTACAGAGTGGCGCCGGCGCGCCCGGTCTTCCTCCC
CGTCCCCGGCGCCACCCAGCACCACCCGCACCCCGCGGCTGTGGCCCGGCGCTCGGGCGG
CGCCGAGCGGGAGCTCGACATCTTCACGGCCGAGCGCTACTTCAACGCCGCCGCGGTCCA
TGCGGACGAGGACGACCCTCCGCGCCAGCTGGCCGTGGATGCGGCGGCAAGCCAGAGCGG
CCGCACCGCTGCCTCGTCGGAGGCCAGCTGGAACAGCCGCTCCGGGCTGCTAATCAGCAA
CCAGTCGTCCTTGGCGGCGGCCAGGCAGCGCGACAAGGGCCATGGCAGCGGCGCCAACGG
CGTCGCCGCCCTGGATACGAGGGACGACCGGTACCACTACCACCGCGGCGGAAGGAAGCC
TGGCACCGGCGGCTTTGGGCAGCGCTGGGGGATCTTCAGCCGGGACTGCCCCTGCGCCGG
CAGGAAGGCCGTCACCGTCGACGTCGCCTCCGAGCCCACCACCCCGAGGGTCCACGCGAG
GTTCGACCCCAGCCCCAGGGAGGAAACCGCCGTCTATAAGGCCAACGGGCTGCCTCCCAA
CGACGAGCCTGGCGTGATGAAGATTTTTACGACAGGGAGCTGCGCGTTCCCGCTTCGCGC
CAACGGCATCCTCGCTCCGGCTCCAGATCATGGCACCAGCGCTTCATTCCCCGCTTTCCC
TCCCGACGTTGACCGCCGCGTCGTGAGCTCCGGCGGTTTCACGTTCCCGGTGATCAGCCC
GGCGACGGCGAGGGTCACCGTCGTTGACGAGCCGCCGCGCGAGTCGCTGGAGGTGTTCCG
TCCCATCGACGAGGACTCGGTGGTGCTCGTGGACCCGCCGCCGCCCCTTGCCACGGCCGG
CTTTCTGCGCGCGCCGGCGGTCGCATCGGCCATGGACGACGACGCGATGAGTGACGCGAG
CTCGGACCTCTTCGACCTGGAGAGCTTCGCGGCGTCATCATCGTACCCGACCACGTACCG
CGGGCGCAGCAGCCGGCGCAACTCGGGGGACGACGACCTGGCGTACGCCGCCGCCGCCAA
CGCCGAGCCGGCGCTGAGCGAGTGCATGTACGCGCCGAGCGAGGCGAGCGTGGTGTGGAG
CGTGGCCACGGCCGAGGGCGTGGCCTACGACGCGGGCAGCGTGGCCAACTTCTCCAGCGC
GGCGTCCGCTTGCGGCGTCGACGAGTTCCGCTTCGTCCCACCGGGGTCCGCCGCCGGCCA
CGATGGCTTCACCGCCGCCATGTCCCGAAGCGCCGGCCGCAAGAAAGGCGGCGGCGGGTT
CTTGGACAGCTGCCGGTGCGAGAAGGCCGTGAGCGTCGGGCCGACCCCGGTCCGTGTGGC
CCGCCCGCCGGCGGTCCCGGCCAACAAGACGGCGATGGGGCTGGAAAGCGGCGGCGTCGC
GCGGTACCACAACCGCCGCGTCCACATGCCGGTGCGGACGTGATCGATGCCACTGCTACT
ACAGAATTCTCTTGTTTGTTCCATGACGCGTGCGTGCATGACTATGACGTCGTCAGCTAC
TGTAAATCTGTAATTAGTTAGAGTATATATGAGCAATGATATCATTATACACTATTGTGA
AGTAAAACGTGCTGCCGCAAATCTGATGTATCGATCTTTAGTCGTATGTGCTATGTGAGC
GATCACTTTCGGATTGTCGACAGATCGCACGATTGATTGATATGATAAGGTCCAACAACT
ACTACTATACTAGGAGCAGCTTAAAACGAACGAACCAGCTAGCGTGGTGCTCGGCTGAGT
TGGTCGATCATGTTGAAATGTCGAGTGTGGAAGGCGAGTTTGCTTGATGTAGAGCCAGCC
TGATGCTGCTGCTGCTAAAGTGATGCAACGAACATTCGGGCCTCCCATGCCCACGTCCAG
TTACATCAGACACGCTAGGCATGCATTATGTCATGTGCGTGCATGACTGGAAATGATGCG
CGCGGCGTTGTGCGAGTGCGACGGGACGACGGCGGATGAACCCCTTTTGGCCTGTATTGC
GGCGCTAGCAGGTAGGAGATGGACCAACTAACCAACTTGCGCCTTGTGTCCTCGCAGAGA
TGGTTGATGAAACAGTGCGGAGTCACATTCTTTAACTGGCATGCGTGAGAGGCTATGACC
CTGTTTGGTTCATAAGTCCTTTGTGCATTTGTCATATACGCTCCATTCAAAAAAAAACTT
TTGCTTTCAAGGTACCACTAGTGGTAGGGACGCGCGCCTCATAAGCGGTCCTTTGCGCAT
TTGTCTTGTTGGGGTAGTGTGTACATGCATATGCATAACACAATACCTTAATTGTTAAAC
TATAGATAAAGTTAACACAAGCTTAGCAGAAGAATATTCAATTGTCAAATATAGCAAGGT
AATAGATGTATATTACTTCGTTCATTTCATAATATAAAAACGTGTTTCAAACTAAAGCCC
CTGTTTTAGCTTAAAAAACATTCTTCTATTACGAGACAGAGGGAGTACAAGATAGGTCAC
ATGCTTACAAGATGGATAATAGAACACATCACATAATTGAATTCGAGGCCTAATATGCTC
CAAAAGGCACGCGATCTCCAAACGAGAAGCAAAGTTCATCGAACCATCAGAACACATAAT
TATCAAGTCTTAGAGATTAGTTAAGGACAATAGATAAATCATATATATAGACAACAGGTG
CTACTAACGACGTTGGCGGTGGATGGTAAGGGAGAGGTGACGCCGTTCCTTGCACTTGAA
ATGTAAGGCATAAATGTAGCCCTCCTTGATGTTGACGCGGTGACGAAACCATGACCCGTG
CATCATGATGGTGCCCTCTTGTCAATTCGACGCATCAAGCGACTGTCACAACTCACAGTG
TCGTTTTTGAGCTTGAGTGGAAGGGTGTCATCATCATCGTGAATGTATTTTTGTACCTTG
TCTTCTATGTACTCCAGTTGAAGTATTGTCAAGAGAAGGAGAATCAGTTAGTTCATGGAA
AGAGTGCTTCTCAAATAGTTTGCATGTGAGTATAAAAAAATATTGAAATGAGAAAGAATG
TTAGCAAAAGAAGAGTTCAAAGTTCACAATCTACGTGCAAGTGTTCAAAAAGTTAGAATG
TTCAGAACAGAGCAACCGAGCAAGCATAGCAAAGCACAGGAAGACTGAAAGTTTTCTATT
GCAGTGCAATGTGATGGACTAAAATCTTGGGTTACCATACCACTCTGGAGCAATACGTGA
CCTTGTCNNNNNNNNNNNNNNNNNNTAACTTGATCCAAAGCTTCATGACCAGTATCATCA
ACTTCCACTTCAATTGGTTTAGGCACCACAGGAAGAACTTCCTGTGCCCTGCTACACACA
CTACTGGAATCCAGAAATTTGCCGTCAGCCAGTTCT