Contig Data
morexGenes
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Map Locations of contig_64122 (4970 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012




Predicted Genes from contig_64122

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_73673 1 518 bp MLOC_73673.1 Available Available None
MLOC_73672 3 1472 bp AK368534 Available Available None





CDS Structure of MLOC_73673






CDS Structure of MLOC_73672






Contig Sequence (4970 bp)

>contig_64122 4970 assembly3_WGSMorex_rbca.fasta
TTACTTTTCGCTTGCTACGTTTCAGCCTCCTCTCCAGATCGGGGAACACCGACGCGGCCG
GGAATGCCATCGCCCCCTCCTGGACCGTGTTGTATGTTTTTATCGTTACATGGGCGATGA
GGCAAAAAAACAAAGGGTATAGATTATGGGGGAACGAGAGACGATAAAACCCAGACAAAG
AGTGAATGTGGTGGGAGGAGAGACGAAAAAAAACGATGAACGTCGAATACCAACTTTCCT
TTTAAGAGTAGAGATGGGCACTAACGTTTATCCTTATCCACACGGTGAGATGGGATGGTG
GAAGAAAAACAAACTTGCACGCATTCCAATCTCCTCAACGAACGGACAGGCAACTTTTGC
ATCCAGCCCCTCCACTTTACACACCTCTTTTCTCCCGCCCCCACAACCACCTCCCCTCCT
CCGTCCTCCCCAGAGTCTCTTCTCTTCTCGTCTCTCGTCGCCTCCCGAGTCTCCGGCGAC
CACACACGCCACCTCGACGGCCATGGAGCAAGGCGCCGACTCACCGGCGGCGAGGCGGAT
GGCGAGGGTCGCCTCCCACCTCCGCCCGCCCACCTCGCAGGCACGAGCCCACAACCACCC
TCCCTCCCTCCCCATCTGCTTGTTACTGCCGCCTCTTCTCAGATTCGGTCGGAGAACGAG
ATCCTACCCAGAGGGGGAGTGCCAGTCCTTAGTTCCTCCGATTACCTGTCGCCGCCGGCC
TCAGTGGCGTCCATTGTTTCCGGGATCCTCTACGCGGGCGAAGACGCATGGCTAGTACTG
TAACACTTTGTACCTAGCGATCTACTGTATAGACCAGCAAGCCATTGTCCAGTCCCCTTG
TCAGGATTCCCGCTGAGCTTGCAAGGTTTGAGCCTGGAGCTCATTTTGCTCCCGGAAAGC
CTAGGTAGGAAGCACTGCTGCCGAAATAAAATCAAGGACCATTAGGTTTGTTACAAATGC
AGCAATTGGGCTGTTCTGTTTGTCTACAAAGTAGGTTCCTCGAGTGAAGGAGTGTTGGCA
GACCCCAACAGTTTTTACTTGGGATCTATTGACGATGGGATGTAATTTGGTCTGCCATCC
GCAGATTGATTCCGTGCAGTTGAAACCTTGTCAGCCACATGTTTATCGAGCATCAAAACT
AGCTATCATGATGAGTACAAGCTCTCATCATTATGTTACTTCAAGATCAGCAAGCTATCT
AGCTGTTGAGGGAACTCAGAAATCACTATCTAGCTGTTTTTTTTAAAGGATCGCTATCTA
GCTGTAGGTTGAGGAGACCCAGAATCAGCGTCTGAATTATTCGGAGCTGATGGTTTTGTC
GGACAACTTCCAAAATTTCGATATTAAACTTAGTTGAATCTGCAAAACTGCAGTGGCTGG
CAAAGTAGGTTACTCGGGTGAAGGAATGTTGACAAATCCGTCGGTTGTTACTAGGATCTT
ATATGACGATGGAATGCAATTTTTGTCTGATATTCTCAGATTCTGCGCAGTTGAAAACCT
TGTCAGCTCACATATTTACTGAGCATCAACTAGCTCTCCTGACGAGTACAAACATTATAT
CTTATATTATTTTACTTTCAGACCAGTAAGCTATCTAGCTGTTGAGGAAACTCAGAATCC
GCAGCATCCTAAATTTTAGCTCTTAAACTTTGTTGAATCCGCAGAACTGCAGTAGTTGGC
AAATAGAATAAGAGGTATCATCCAGTCCAGAATCAGCTCTTGCTAGGCTAAATTTTCTCT
TTCCTTATTTTGAAGATTGAGGAGGTTGCCATCTTGAAGGGCTCTAATTGCCGTGCGAAA
GGTGCAGCGCCAGGGTTCAAGGTCGCTGTCCTGGGTGCATCTGGTGGGATCGGCCAGCCA
CTCTCGCTGCTTATGAAGATGAACCCTCTTGTTTCGGTGCTCCATTTATACGATGTTGTC
AACACACCTGGTGTCACAGCTGACATTAGCCACATGAACACTGGTGCTGTGGTATGCCCC
CTTGACCTTGTATTTATGTCTTCTTCTTGTTTCTGCGAAGTTGCTCACTGGAAAATGATT
CTGAAAGAATACTGTAGTTGCATGTTGGTAGGCCTCTAGTACAGTTGCTCCCCATGTGAT
TCGTGTAGGTTATGTTTAGAGGAAATTAATTACTGAAGGAATGTATGTCTTCTCTACTGT
CCTTGTAGGTCATACTGTAGAGGTTTGGATATTAGCATTAGCCAACTGGCTGCCACAATC
TTATAATCCATAACTCGGCTAACAAGTAGCCAATTTACAGTGGCATTATGCATTGTTCTT
AAATTCATATTGCATCAGGAGTGCGACAGAGGTCTCGGAAGAATATATGTAGTGTCTGAT
CATTCAGTACTGATTATGGATTTAAATGTGAAAACAATAAATAATGCTGCAAGGAAAGCA
TATAACCTACTTAAATTTTATGTAACTGGCAGATATTTGATTGCCACAATATTAATAGCT
GTCCACATATCGTTGACCGCCCTAGGCTATGCATACGATTATCGTCTGATTCTTGAACCT
TAAAGGTTATCTGATCATTTGGTGTAATTATGCTAAGGTATAATTTCTACAGGTGCGTGG
CTTCTTGGGTCAGCCACAATTGGAGAGTGCTCTTACTGGAATGGATCTTGTGATCATTCC
TGCTGGCATTCCTCGGAAACCTGGGATGACAAGGGATGATTTGTTCAACATCAATGCTGG
GATCGTTCGGACTCTTTGCGAGGGAATTGCAAAATGCTGCCCAAATGCGATTGTGAACGT
GATCAGTAACCCTGTAAATTCCACAGTTCCGATTGCTGCTGAAGTATTTAAAAAAGCTGG
AACATATGATCCTAAGCGCCTATTGGGGGTGACAACTCTTGATGTAGTGAGAGCCAATAC
CTTTGTGGTATGTACTTCAAAATTGTTTGCCATAGTGCCCAATTATGTTGCTAGTTTCTG
TATGGACAGGTTCTCAAATTCCTATTCCTGCCATTCTCTGTCTACAGGGAGAGGTTCTTG
GACTTGACCCCAGAGATGTCAATGTTCCTGTTGTTGGCGGGCATGCAGGAGTTACGATAT
TACCACTCCTTTCACAGGTTATTTGCAGCTGCTTCAAATTTTGAACATATATATATATAT
GTAGCTGAAAATTTGTTTCCATCTGATGGAACTAGTACTTACCCTGTTCATCTTTATGTT
TTCCTTCATTGAGCTTTGTTGTTTTCATAGGTGAATCCTCCCTGTTCGTTTACCTCAGAA
GAAATTAGTTATCTCACTTCTCGCATACAGAATGGTGGGACAGAAGTAGTTGAGGTATGG
TTTCCCTTATCACCTAATGCCATATCTTGTACGCACAGTGGATGGAATAAAAGTCAATTT
AGAAGTTTCTTTTCCGATTGCCCTCTCTGAACAGTGGCTTAGTGACAAAGTAATAGTTTT
GCATTAGCTACGAATACTGTATTGCGTCTGATCGCAAGAGCTAGAATGTTCTTACAAATC
AAACACATCATTAATCTGAACTCACAGCAGAACTGGGGATCTGCAATAGATTGGAAAAGA
AGCAAGGTTAAAGAACTTGCCACTGCTGCATGCCTGTTAGTTAATGCAATGAACTTCCTT
TCTGACTTGCCGAAATTCATTTCAGGCGAAAGCGGGGGCAGGATCCGCAACTCTTTCCAT
GGTTGGTCTCCATCATCCTACACTGTTCCATACATGCATTTTGAAATTACGGATGGGATG
ACGACACTGCATCTTTCTTTTTCTTTTCCCTCTCAAAAAGGCCTACGCAGCAGCCAAATT
CGCGGACGCCTGCCTGAGAGGGCTGCGCGGCGACGCCGGGATAGTCGAGTGCTCGTACAT
AGCCTCTCAGGTTACACACCCATTCCCTTCCTTGAGCTCATTCCATCAGCATTTTGTTGA
TTCGTGAAATCTCCTTCTCCACTCCGCGCATGTATCTTGAAGGTGACGGAGCTGCCCTTC
TTCGCGTCCAAGGTGCGGCTGGGCCGGGCCGGCGTCGAGGAGGTCCTGCCGCTCGGCCCG
CTCAACGAGTTTGAGAGGTAATGCAACTAATAATAATTACATAACCCATGCAGGATCGTT
CGTTTGCGTCGCCCAATTTTTGTTTGTCTGATGTCGTTGCAGGGCCGGGCTGGAGAAGGC
CCAGGGCGAGCTGGCCGAGAGCATCCGCAAGGGCGTCGCGTTCGCCAACAAGTGATGAAG
AGAAGTGTATTCAGCTGCGTATTCTTGGCCCCCCAGCATAGAAATCTGAGATGCCTTTTG
CTTCCGTCTGCTCCTGCCTGGGAGCAACGGTCGCCGTGTGATGTGATATCCCTGTATATC
GTATAATAACAATAACAATAATAATGAAGTGTACTTTATTTTATACTGGAATACGATGCG
GACTACCCGATGCTTACGGCTGTATAAACAACTGAATAAATGCGACAGATCTGATGATGA
TGACGATGATTTATTATACTAATATAAACAAACATATACACAGACAAACCAAAGTTGAAG
TTGGCTCCCTCTCTCTTTCCCTTGTACCATTTCTTGTTCTCCTTTTGTTAACCCGCCGCC
CCCTGGATCTACCAACAGGCAGGCGACGCGTGTCACCGTCAGCCTAAACCCCACCTCGGT
GCGCTCCGCCGAAACCCACGGCATATTCTCGCCACTTGTTCCATTCCAGTCCCCGCCCCT
TCCACGTGGGCCCCATGACCGCAGTCCGGATGGCCCCACTCGCAGCGAGACGCGGCGTCC
CGACCCGTGTGCCCCGTGAAAAACCAACAACCACCAGCGGCGCCCCCCGTTCCATTTCCC
TTCGGTCGCCCGCCGCTTGGCTATAAGAAAGCAGGGGCCGCCCGCTCCGCTCCGCTCCGT
CCGTCCACCCGCTCCAGCCATCCGATTCGATCCGCCTCGGCTTCCTCTCCAAGCCACAGC
TCTTCCGGCCATGGCCGCCACGATCCAGTCCGTCAAGGCCCGCCAGATCT