Map Locations of contig_64109 (8722 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map locationNo map location




Predicted Genes from contig_64109

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_73664 2 1224 bp AK363167 Available Available None





CDS Structure of MLOC_73664






Contig Sequence (8722 bp)

>contig_64109 8722 assembly3_WGSMorex_rbca.fasta
CTCTAGGGCATATTTCTAACACATACCTTGGTCGTCGAATCCCACGAGGTTGATCCCCTT
CTAGCAAGTGGAGAGGGGGGTCGCGATTCGTCCGAGCTTCCTCCGGAGACAACTACAGGG
ACCTCCGATGCCGCCTGTGACAGAGCGGGTTGCGGCCAAGTGGCGTGCAATGATGGAGGA
GGCTTTATCCGGCTCATAAATTGCCGATGAACATCTCACCCTTATTTGGTGCAATTCTAC
AAAGCATTCAATCCATTGATAGCGGATTGAAGGGAGCCTTCAGCGGTTTGTTGGCAGGTT
TCAAGGTAAACCATGTAGTGTTAGACTTATTTATAAGATTTTACATGCCTTATTGGTATA
ATAGCCCCCGAGCCATGGGTGAGTTGAAAAACTTACCTGTGGCTCAAAAGAACTTATAGT
CATGAACAAAAACAGTCTAGGGACCCTTGAACTATAACAGCTCAGGGGGTACTTCGGCCG
AATGTCCCAGTCCCGATAGCTCGAGTTCTTATTAATCCATAACTTGTCTCGCATGCCTCA
TCCTAGGTTGTGGCCACCAATGCCCTTGAACTTGCAGAGCTGAACCAGAAACTCAAGGTT
TCTGATGAAGAGCATATCCTTCTTAGTAGTCGGCTCGACAAGAAGCAGGGTAAGCTTCAT
GTGTGCCGCTAAGACTCTTGTTGTAGTTAATAGTTTAGTGTCGTCTCACTTTGGTATATG
ACATCTTGATTCTGATTATGTGAGCAGCTATGGACGCGGAGTTTGAGAAACTCAAGGCCG
AATTGGAGAAGGCCAAGTAGGAGGCCCCGCTCACAAGATGGTGGTCGAACAGACAGTCGC
CAAGCTAAGCCCGGTGAAGGTTGAGAGCGGCGGGCACAAGGATAGAGTGGTTGAGGTCCA
GCAGGAGCTTCAAGATGCGAGCGCTAAGAGCGAGGCCTTGGAACAAAAATCCAAAGAATA
AGCAGCTAAGCTATCCAAGTCGTCCTCCGAGATCAAATCGGAGTGGGTAGAGAGGCAGTT
TTTCAAAGAAGAAGTGTGCCAATTCAAGAAGATTACGGATGGTAAGCTATTTTACACTCT
AAAGTATGTATATGTATATCCGTATGTAGTTTATAATGTAATGTCTTATAAACTTAAATT
TATGAACGGAGGAAGTAGTTCATTTGAACCTATCATGTAGAGGTGGCAAATCCTCGTAGC
CAACTATGAGTGAAGAAGATTTACTCCCACGATGACCATTAAAGGAAAAACTTCACGCTC
TCGTTGGTTCATAGGATAGAATATTATGGGAATTTTTTCACATTATGGGAATGTTTTCCA
TTAAGGTCATGCTAGTGTTTATTTTCACAAGAGGATTTGTGGCACGCACGTGCGGGGCAC
CGAGTAGCTCGCCCATTCTGTTTCTTTTGGCTTTCAATTTTTAAACCTTTATGTCTTTTG
AATAAAAAGTTCAAATTAAGTAATGTTTTCATATTCATGTTACTTGTATCTAGGGAGATC
CATTATGAATATGTTTTTATTTCTTTTCAAAATAAATGTTAAATTCCAACTTTTAAAATT
TGGTACAAGCGACCGACAAAATTATGATTTTTTTTGCCTACGTTCGATAAAAATATGCTT
TATAATTTTATCTATGAAACTTGATAAAAGCAAACGAGAAAACTCAAGTCGTTGACCAAA
ATTATAAGTTTCCATTATTTAAACTTAAAACTTATTGTACTCTTAGGCCTCTGTCAATGC
AAGCCTCTTAGCGCAGTTTCAAGGGCATTTTGCTTATTTGATACTGTATTTAATAAAGAG
AGATAGTGAGGTTGTATCTTAATTAACATACAACCTTAACACGTGGTCATAGACAAAAAG
GAGGTACTAACCCGATCACATGCATGCATGAGCCACAAATCATTAAATTTAGATACAACA
CATAAGACTGGCAATAATGGGGAGTATCATATAGTAGTATCATGCATATGATATTATTGT
ATGATACTATCCTCATAGTGCATAGTATCATAAACTAATATCATAGATGTCCTTATTTAT
TGCCATGCATGACACATAGTAGCATAGCANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNC
TCTAACTCTCTCTCTCTCTCTCTCTTCTTTAATTGTCTGCCACATCAGCATGTTTGCTAT
TCCTAAGTGACAATTAAAGAAGAGAGGGGGTTGGAGTAACATAGGTAGGAGTAGATACCA
TAACATGTTAAATGCAATGCTATTATGTGTCATGCATGTCAATAAATAAGGTCATCTATG
ATACTAGTTCATGATACTATGCATTATGGGGTAGTATCATACAATAGTATCATATGGGTG
ATACTACTATATGATACTCCCCACTATGACCAGCCTAAGGTTGTCTGCAATGGAGTATTA
TAGGTAGTATCATGCATGTCAACTAGACAATTTCGATGAGGTGGCATAGAATTAAATGAA
GAAAGGGAGTATTGAGTATCATGTCATGATACCGTATCATATTAAATGATGTGCTATTAT
GTGTTTTTATGATAATAAATGAACTATTCTATAATACTAACATATGATACTATGCATTAC
GGATGTAGTATCATAGACTAGTATCATATGTATGATACTACCATTACAACCAGCCTGAGA
TACAACTCATTGTACTAGTTGTTTTTATGTTTTTATTACACATATGATTACGTGCTAAGA
GACGATGCATCGACACATGCCTCACGTGTGACCTAACTACTTTACGGATGACGAGTCAAT
CAAACGGCTAGACATGGCTTGTCAGGTGTGTGTCCCTGCGAATTTCCATCTCATTTGCTT
TGAAATGCGAAGGACAAAGACCAATCTTACATAAGAATAATAGGAATCCAATCCTGCAAA
CCGAATGGCTCTAAAACAATTCTAAAAAAAATCTTATCCTATACAATTTCGATGAAACTT
CTCCAAACCAAAAACCAAAGGAGGCCTCGTTGCCGGTGCCTGATACGAATGCCCCATGCT
CTCATTTGGTTCCCGACCTTTTCGAGCGAGACGTGGATGATTGCGTTCGTTTAAGCCAGC
GTGCGTCTGTGATACGTACGCGGATGGCATGGATGATGATAGCGTCACGACTAGATTAGT
GCAATAGTGGAGCACGCGCGATGGGGAAAGCAAAGGAAGAAATCCCGTCTGCACGCGTGC
GCCCGGCCGACTCATCAGCCGATCGCCATGATTAGCCACTCAGTTTGGCCAAGTGCATCA
TCGGTTGGTCGGTCACTCATGCGTCGCCTTTTGCCCGGCCGCCGGCTACCGGGAGGTAGT
ATCATAGGAGGAGGCGGCTTTGGGCACTACCAAGTGCTTGCTTCATATTCTGTTTTGCGG
CGTGCCCTGGTTAAGGGTATACATGACCAACGATCGGCTTTGTTTGTTAATACTGAGTTG
GATGGACGCGAACAAGTGGCATATGCCTAAGTGCCAACCCTGTTCACGTACCTACCAACG
CGCGACCCTAAATGATCCAACCGCATTAAACGGATATAAAACACGGTTAACATATGGAAG
CAAATGGACAAATAACTGTTTTTTGCCGATCTATTTTCAACCCGAATTCGGACCGCGTTT
GCGTTCAGAGTGATAGCGGTCAGAAGGGCGGGACACACATCATTGTTCTCCCCTGGCCTG
CTCGTTGGTGTCACATACGCCTTTTTATCTTCCACTCCCCTCCTTTCGCCCCCCTGCCAT
CTCCGTCGTCGCCCGCTGGTACCCGTTTTTCCCGGCCGCCTTCCTCGCTTACTTGCCAGG
CCATCTAAACCACGACCACAACATGTCATAGCCGGCCCACACAAGCGTTTTGGAGGAGTT
TTTGCCGGTGTTCGCGGATCTTCCAATTCAAAGAAAAGCTACGCCCGTCGACAACGCCCA
TCCAACCTAACACCTTCCGGCAGGTTGCTGCATAGCCGCAAGGCGGCTCCCGACAACGGG
CGTGCTGCCTATAGGGGAGCTCGAGGTGCTCTTACATCACTACGACTGCAAGGTTCCATA
ATTTTCTTACAAGGTACCATGGATAGTGGGGATGAGTATTTTTTCCACAACTTCATTTAT
TCGTCGGATGATTCGTCCTTGGATGATGAAGACGCTGAGGTAGCTGCATTGGTCATTTGT
GACCACATTGCTAGGCAACGACCTCGGTTCAAGGGATCAATCTCGGGTCATGCTCTTGCC
TTAAACCGCAATAGGGAGAGCGGCCACACCCTGCTCTCTATGCCTACTACTTTAAGAATA
CCGCGCCTGACAAACCACATCAATTCCGTCGCCGCTTTCGTATGACGAGACATATGTTCA
ATCGTATTCGGAAGAGAGTGGTAGGACGGATATGGAGCATGCTTTTTGGTGTTATTTAAT
CACGATGGGGTATCATTCGAAACCCTGCACTGACATAAAGCACCCAGAAGATTTAGAAGG
TGGTGACTGTTTGTGTGATCATGCACAACATGACATGGAGAATGAGCATGATGACATCAT
GTATGACCGAGGATTTGATTTTTAGTATGAAAATGTTGAGCCTGAGCACCAACAACGGAT
AACCTTTGAACAATTTATCCAATTTAATCGTGAAATGCATGATTGACATACTCATATGAG
TTTCGGGATGACTTGGTTGAGCACATATGGACTCACATTGGCAACCAGTACATGTATCGG
TTTATTTACGTTTTATTTATTCAAGACAATTTTGATTGGGTTGTAAAACTGTTTGAATGT
GTTTTTATTTGAACACTGGACTATTTTATTTGTAAAACTATTTGAAATGTTTGATTTAAT
TGGTTATTTGCATAGTCCTAGGGCATTTCCCTGGATGTGAGCGCACGTTTGGCACGTCAG
AATGTGAAGAGACTAATTATGTATGAAGAAACAAAAAATCTCTCATTTTAGACGTGAATA
GATTTCTTTTTATTTCAAAATAGAGGTTTTTGTCTTATGGGGATCGATGCACAAATTTTT
GGAATCCGGTACCAACAAGTATAGTTCCTCCTCCCGTCGATCTGGGACATTTCCCATGAT
TAGAACTCCCCAGTCCTTAGATTCGGGAATAAGGAAATTCGATGATACGCGACGATATAA
TAAAAATGACTACTCAACAGAAATAGATTATTTTTAAGTGCAGATTTTCAATGCAATTTG
TCTATTTCGTTTCGAGAAAAAAGCCAATGTTGACACCTTTTTTTTTCGAGTCTACAATAC
AAATCTTGTTGCAAAGCACTTTTATTTACGGCTTTGGATGATCAAAAAGACACCGGTGAA
CATCCATTTTAGCGGATCCAGCCCTATTCTCCATCCTGACCTAATCTACTGCCTAAACTT
CATGCTTTTTTTTTGTGGAAGACGGAACTTCATGCGAATCTACAGACCCGACTTATCCAC
GAAAACAGACGGAGGCCGACCCATTGCCCTACTCAAATGGATAAAATTTTAAAAAAATAG
ACGTTCGTTTGAGTCATGCGTTGGAGTTGGCCTAAGCACGAAACACGAAACATGAAACAT
GATGGGCCATGTCCATTACAGTACTACTTCCCATAACATACCGTGTACATATATGTATAA
AAACCGTACGTACAGAGGATCCACATCATCATCATTCTATACTGCTACGTGCTTTACGCA
TAATAACATCTGAGATTCCATGCACGTGAAGTGAAGGGCAGAGTGGTGCAGCGTCCGTTC
CTCACGCCTTGACTTTGGCCAAAGGGGCACGGGCCGGGAGTTGCTGACGAGAAACACGGC
AAACACATACAGTACCCCCAAAGTTCAGAACCGTCACAAAACAATAAATCCTTGAGCAAC
GAAGAGAAGGAAGGAGAGGTTTGTTACACAAGTGACTGTATACCTGGTAGCAGGAGATGA
GGGAGGTGACGAATCCGAAGGCCCCGGTGACCCTTGGGGTGACCTTCTTGGGCGCCAGCT
GCAGCAGCCCCACGGCCACCACCACGTCCATGCCCGCCTTCACCAGCGCCAGCAGCCGGT
CGTCCGACTGCTTCATCTTCCCCAGGTACTGCTCGTCCTACGTACGTACGTACGTACAAG
GTCACAAAATCACAGCAAAATCATGTTAGTTTCAGACGCATCGTGTCGATCGTGGGCGGC
AGATTTAAAATGATACTACCAGTACCTCGTATTTGTCAGCGCCCCTGAGCTCCTTGGCGC
GCTTCCTCATCGCCTTGGATAGCCTCTTGAGCTCACCAAGCTGTGCAAATAACACATGTG
ATCAGCTAAAGCATGCTACTACATATATCGCGTGCTATCTCTAAGAAACTACTCCAAATA
TTTCTACTTTTGTACTATTTCTTCTCTACTACACATATTTAGGTACGGTAGAGATTATTC
GAAGCATGTGCATGCATGGAGTTCCCATGAGATGAAATTGTGCAGATATATGTATGTACC
TCAACTAGGCTTGCACAGACGGAGGAGGCCATCCAGCAGTAGAGGGATATCCTGGCGATG
CGGTCCGTGCGCTCCTTGTTCTACCGACAGCAACAGAAAACCCATAAGATAGAATGGACC
ATTTTAGAGGGCAAGACGCTTGAATCCCGGCAACGAACCTGGTAAATCCCCGATCTCCCT
AGCCACACGAACTGGTCCAGGAACAAGAAGGTCGACAGCAGAGCATTCTTGGACTGCAGT
CACAGAAACAATTACCAGTGAGTTCATCATCGTCAGTTCGTTACTCGGAGGGCCGGACTA
CCTACCTTCCCAAGCAGGACCAGTGTGAGAGGGGTGCCTTTGGCGGCTGGGCTGATGAGA
GCATGAAGATCGTTCACCCACTGCAGGACCAAAACCAAATTAACATAACACTGCGATGGA
GAAGTAGCTAGATTATCATGGTGCGAGTGCGGGCGTGAGTGCGCGAGAGAGCTGACCTTG
AGGAGCCTGAAGACCTTGCGAGCCAAGGTGGTGGACTTGTCGACGTTCTGCGCGGTGCCT
GGCTGGCCGTTGCTGATGAACTTGGAGCCGTACTGGATGGCCCTGCAGATCTTGTCCCGA
GCCTCCGCCTTGTTCAGGTACAGCACCGCCAGGCCCAGCTCCACCCTCGTAGCCTCCAAC
GAGCCCATCTTCCTTCCTGCCCTCTGAATCAACTTCGAAATTAATGGCACGAAATTCATA
AAGACAACCAGAGCTTATCGCAATCTTCTACTACGGAGTAGTATTGACTACGCGTGATAA
CTTGTGAACTCGGTCCAAAGCATCTCGAAATTCAGAAATACCCGTGCGTGACAACAAAAT
TCAGAGAACCGGAGGCCGAAGCAGACACCAGCACGTAATCTCCTAGCCCTACTAGCCAGA
ATTTCTCTAGGAAAGCAGGGTGTAATTTCTTGAAAAGAAAGCTAGGAACTGAAACAGAAG
CGAGCGGAGCAGGCCGGGAAATGCACAGAAAGGCTGACAGCCAGCAGCCCATTGCAACAC
TGCATCAGCAGGAAATTAGGCACAGGGAACGGCTACACAAGCCGGCACGGGAGTACGCAA
GCCGAAGCATCAATAGGTTATAGATAGGATGGATTATGACGAAGATGCATGATGGGCAGT
GCAATTACCTTGGTAATGACGGACCGGGGAGAGAGAGAGAGAGGGAGATGGAACTGCTTT
CTCCGGCTGCTGGGGAGGGGAACTGGAACTGCTTTCTCCGGCTGCTGCTACTGCTGCTTC
ACCATCCGATTTTTGTGTGGACTGAGAGGAGATGAGCCGTGGAGGGACGGACGGGGCTGG
CTCCCTCTCCTCCGGGCTGATGAGAGACGGACGGGTTTGGATTTTAGCCCTCCCAGTGCG
TGTGGCTACGCCCACACGACACGACACCAGGCCATGAATGGATTTAGTGATAATTCGCCA
GTGGGCTGCAGCTTAGATACATAAAAACTTTTTATTTCTTCTTACTAAAAGGGCCTCACA
TATACGAGTATTTATTAATACCAGCAGTACATACACGCCCTTGTTATAAGAAAAAAAATA
AAGAAAATACATGGAGAGCTAAACTGATCATACGCCGGGCCAGGCTTGCAAAAGCTTGAT
CCTGAAACTACAAGCTTGAGCCCAGCCCAAAGTCCAAAATTAACTCTCTTCTCAAGCTCG
AGCAAATCTTGAAAAGTGTTGGAAATATTAGCGTTTTTTTGATTGATTTAGTCCAGAAAT
AAATCATGAGCATAACATCAACCGTGTTAAGCACATACTGATTTGGTCACATAAGTACAT
ATTACGCAAAGCTATAGACGCATCTACACATAAATCGGGGCTTCCGGTGTTTAGACGGTG
GCGTGCTCTTCCTCGTCGTTGGACGTGTTGATCCAGAGCCAACATTCTCCTTCCCTCATG
TTCTGCTCGCGATGAGGACCTCTCCATCTTCGAGCTATGCTTCTTCCTATCGATCCTTTT
TTAGCTTGGTGTGTCTGAGAGCATCTCTAGCAGATCCTGTAAAAGAGCGACCCGCAAAAT
GAGTTTACAGGTCGCCGCGAAGCAATTTTGCGGGGCCATTTCGTGCGCCAAAGATCAGAC
CCGTATATGAAACTGTAAAATTTGAAAAAAGGGTTCGCGGGTGAAACTACATCATGGTTT
TCATCAAATTACATCACGGTTCTTCATCAAACTATATCATCCTTCATCAGCGACCTACAT
CAGTTCTTCAAACTACTACTAGGTAGGGGGGCTGCGGGCCGTGCAGCGTACCCGAGCCAA
GGCTACCAAAAATGACGGGTGC