morexGenes - Barley RNA-seq Database

Contig contig_64041
Source Contig contig_64041
Contig Data
|Contig Location|
|Microarray Probes|
|Predicted Genes|
|CDS Structure|
|DNA Sequence|
morexGenes
Links
Map Locations of contig_64041 (7287 bp)

Morex x Barke POPSEQ 2013	Oregon Wolfe POPSEQ 2013	Morex Genome Release 2012
	No map location
Predicted Genes from contig_64041

Gene ID	# CDS Predicted	Max CDS Length	Probes in Cluster	FPKM by Treatment	FPKM by Replicate	Top Rice Hit
MLOC_73615	1	295 bp	MLOC_73615.1	Available	Available	None
CDS Structure of MLOC_73615

Contig Sequence (7287 bp)

>contig_64041 7287 assembly3_WGSMorex_rbca.fasta
ATGCAACTTCAAGCATTGAAACCCCGGCTGCAATTGTACTGGGTGCAAAGAGACTGCAAC
TGGGTTCGGGACAGGGGTTATCAGACCAGTTGCATGTGCACCAGTAGACGTGCAACTTCA
AGTATTGAAACCCCACTGCAATTGCACTGGATGCAAAGAGACTGCAACTGGGTTAGGGGT
GGGGGTTGTCAAACCAGTTGCATGTGCAACGTTGAAACCCGGCTGCAATTGCATTGGATG
CAAAGAGATTGCAAGTGGGTTCGGGATGAGGGTTGTCGGACTAGTTGCATGTGCATCAGT
AGACATGCAAATGCAAAAAAGAAAAAGACACAAGCAGCCGTGAACATGATGCATCGTATA
TCCTAGTTGACATGCGCAGAAGATTTGCGTGTAAGCATTTTCTTCCTTTTCCTCAAATAT
TCCAGCCATGCAAATGTAGAAAAAACAACAAGACACAGAGAATTATATAGCTACGTAGTA
AAAACAAGCCCAGCCGAGCCAACATAACATATTAACACAAAAAAATAGCACAAGAAAGAA
ATAGTAATATAACATAAAAAAATGAATGAGATCAAATTATATATCATCTAGATGAGTTCT
AGCCAAACCCTTTAAAATATTGAAATTAAATAAACTATATCAGATGATTGATATATATGA
TTGATTATTGTGTATGAGGATACAAATATGTGACGCAATATGTAGAGGGCCGGCGAACGT
TGTCCACGGCGCATCGGCGGATGTATCGGGGACTGAATTTACCAGTCCGGCTGTAGATGC
TCTCACAAAGAGAAGGGCTGGTCAGGCTGGGGCGCACATGCCGCCGGTTTCCCCCGCAAA
CTGGAAGGTGCCGCTCGCCGAAACGAGTCACGACCACGAGTGAAACTGGCGGCACTTGCA
GCCGCACATGCTCTGTTTCGTTTCTCATCCCACAGTTTTATATGTATTGTGATGAGATCG
GCACTGTGATGTCTAACTTTAGATCTTTAGTGTGTAAAGAAAGACGAGGGCGCAGTGGAG
GATACTACCAACAAACATCATCAATCCTATGGATCCCTACCATAGTTTTGGATACAGTTC
CGCACTCCAAGTCCAAACGAGTGAGCAGAGAGAGCACCCACGGTTTCCGCCCAAAACCGT
GCGTGGCGGCCACCTTTTTGCTCGCTATAAATACATGGCTAGCTCCTCGTCCTGGAGGCA
TCAAGCAACAACAAGCCAGGCAGCGCATCTCATCTCACTCTATCGCACTCCTTGTACTGA
GCCGTTTCTGTACAAGATCACGGCCAAGATGTCGTCGACGGCCACCGTCACCGGCGCCAA
CCCCGAGAACAAGCTCGCCCTCGCCAAACGCTGCTCCAGAGGTAATAAATAACCAGGATC
CACAGCTGAATCACGCTTTCCAAGTTGTTTACTGCTAGTCTGACAGTAGCAATGCGTTTA
TTTTGTCAATCTTCCTCAGAGGCGACGCTCGCCGGAGCAAAGGCGGCGGCCCTCGCCACG
GTCGCGTCTGCGGCGGCAACGGTGAGCTAGCTCCTTTGTCTAACATGACTTGTTGATTTT
CGTTCACGTTGGACTCTGGTTTCCATAACTGAACTACTATTAATCACGCAGCTGGCGAGC
GTGAGGATGCTGCCGTGGGCCAAGGCGAACCTGAACCCCACCGGCCAGGCGCTCATCATC
TGCACCGTCGCCGGGATGGCCTACTTCGTCGCCGCCGACAAGACCATCCTCTCGCTGGCG
AGGAGGCACTCGTACGAGAGCGCCCCCGACCACCTCAAGGACACCTCCTTCCATGGCGCC
GCCCCTCGTCCACGTCCACCGCCACCGGCGTTCTTCAGCCCATGAGCTAGTGTTCCTGCT
AATGTATGCATCGTCGTCAGTGTCCCAAGAAACTGCTGCGGAATGAATAATTGAATATCT
GTCGTCGAAATTGAAACTACTACTTCTACTTATGTTATCATCGTTGTTAACCGCTGACAT
GTACTTTCTCTGTACCTCTTTTGGTTCGGTTGCCGCTCTTTTGGTTTGGTGGGTTTAGCT
GTGTTGTATCCTCTGTTCGGGTATATACAACGTCAAGTATATACATTGTTAATTAGTTTG
GAACAACGTCAAGCGCATTCGTACAGTCGAGGCCAGATGGATCGAACTCATGACGTTGTG
GAGCAGAGAGGAGCCTGCCGCAGGGCGGCACTGTATGTGCCGCTGGCATATGCAAGTCGA
GTGGGGAAGAACGGGCACAACGATGTCAGAATCGGCGTCGATCGGCCGGCGACATACAAA
TGGGTTCGGCGGAGCGAGAGAGGGGAGGGGGGTTAAGCCCGGGTGATGGCTTGTATGCCT
ATCATCTATCAGCCAACCACGTGCGAAATATAGGAACACTGCTAACCTACGTGCCGGCTT
GGCTGCTATGAGCATCTACAGACGGAACATGCAAATCTGCCCCCCTCAAACGCGTGCGGA
CGTGCACAATCAATGATCGACCGTGTTTGTTTTAAGACTCTACTTTTTATCTGTGCAATC
GCACTTTTCATATTTTTTCTTATATGTCCGATCGGTTACATGTGATTGATGGAGAAGAAG
AAAAAGAAATAAAAAATAAATAAACAAAGAGAAAAAGTGGTCCTAGGTGGCGGACTCGCC
AGGCGTGTCCAGACGCGTCTGCGAGCTCTCATATCGTCCTCATATTTGAGATGGATATGA
GGGTGCCGATCAGTCCAAACGTTTGAGATGGATTTGAGGGGTCCGATTGTAGGTGCTCTA
AGGGCATCTCTAGCCGGACGCCTTAAACGACCCCTCATATCCATGTACACGGCCGGTCAA
TGAACGTACATGACCCCTCATATCATCCTTATACGTCTGGACTATCCGCAAATCCTCATA
TCCATATCAAATATAGGGAGCATATGAGGGCTCGCGGACGCGCCCGGCTCACCGGTCAGT
CCGCCACATAGGGCGCGACTCATCCAAACCATCTTTTCTCTTTCTTTATTCGTTTTCTTT
CTCTCTCTTCCACTCGATCAATCACGTGCAAGTGACCGGACATATGAGGAAGAAAATAAG
AAAAATCTGACTGCGCAGACGGACAAATATCAGACATGCCCGGTCACTGACCGGGTGCGT
CCATAAACATTTAGGGGGTCATATTTGCTATGTACAACTGTAGATGCTCTAACGTCGCGT
CTATATGGCAGCGTACTTCTGGAAGGAGAACGCTGCTAAATGTTTGGGGTTTGAATTTTT
TTAATGTAAACACAATCTAAAAATTTGGAACTTTGTGTGGTATCATTATATTAAACTTTG
TATTTTTAACCAAAAATTAGAAAGATTCCTTCCAAACCTAAGAGGTATCTCGACAGGTAA
TCCAAAGAATTTTGAAAAAAGCGTGCCCGATTTAAGATAAAGATGGTAGTATTGTCATTT
GTTTCACTTCATTGTCTCGATTTGTTTTTTTTATTCACTTGAAGAGTGTCTATGCCTTTA
GTATGCACCATTTTGTAGTTACATATCCACTTATGAATTTACTGAGGTTGTTTTTATTTT
AAAGAGACTTAATATAAAAAATTACTTAGCATCGTTTAAGTATCAAAACACACTACTAGT
GCGGACCATTAGGGCATGTGCTGTCACGGGAAACATTGTTGGTAGTATTTATGTATTTTA
GTATTTTAAACAGAACTACGGTGTTTTGTGTTTCAAATTTTATTAAGTAAACTTTCACGA
GACATTTCAAACACTACAATTTTTTTATTCATTTTAAGAAAATGTAAACACCTATGAAGA
AAATGAGACATGCGATGTTTTCGTTATACATGAACACTTGAAGGTGTGTTTATAATTTAG
GAGTGTTATAAAAAGTTTTCATATAAATTCCTTTGAAGTGCACATTTGCTTTCATGAAAG
GAATTAGATAATTCGACACAACATGTCCTTTTTTATTTCAATGAGCAATATAAGCGACGT
TTACAGGAGGACCACACACGACTGCCGCAAGCAAATTTAGCGGCGCCCCACACAAAGTAC
ACGCTGAAAATGTGTTGGTCCCGAGCCATGTTTATTCGAAAATGTGTGGGTCCCGAGCCA
TGTTTATTCATGAGATTCACATTTTCAATTAATGGTGCTCGAGTGAAAAACTAGCCGCGT
TCCTGGATCATAAACGCTGCCAACTGTTTTGGACTGGTGGGCATGTACTGTTCACCTTTG
TAGGAGCGTTTAAATAAGAGCTCTTTTACCGTACCGGCCCTCCGATAGATATGGCCGTGT
ATTCTCGAAATCCAAAGGTGGTAACCCATCTATACTGCTGAACCTGGCCAATACCATCCG
CCAGCAGTATAGGTGGCACTCGCCGCTCCGTGTGAGCAGTATAATTATGTAAGGATAATT
TAGGGAGAAAGAAAATTTGTAGCCCAGCTCCCGACTTGCTCGGCTGCATGCACGCGCCCC
TCGGCTAGGATTTCGGCGGTCGCCTCGTCGCCTCAACGCTGTTACCATGCTCGTTCGACC
ATGATGGTCGACTGCCGCGAGGCCTCCTCTTCCCCCATTCCTCTGTATAGGCGGCGGATG
TCGGCCTCATGTCCCGCCCTTCCTCTGTGCCAGCGGCCGCATCGCCGCCTCCACCCCTGT
CCATCGTCCTTGTGGACCGACGATGCTATGCCGCCGCCCATGATCGTCAACCGCCGCGAT
CGACGAGGCCTCCTATTCCTCCCTTCCTTTGTGCTGGCCGTCGTCGCCGCATCTCATCTT
CATCGGTGATTCTGCGTCTCATTCCTTGGTCATGCTTGTGGACAGAGCGCTTAGAGCTAT
GGCACAGTTGATTGATCTGCCTCGCAACCATCGGCGCTGGCTAGGGAAATTATACATAGC
ATTCAAAAGCTACTAAACGACGGGCTCCGACGATCAACCAAAATACAACATCACCATCGA
CTCGGAGTTGAGTGATTAACCACCATGGCACCAAAGACACAGAAGGTGAGAGAAGTTGCG
ATCTGTATTCTTTTTTTTGTTTTACAGGAAGTGGCATGTATTGTACTGATTAGGACTGAA
CATGTGAGGGGTGATACGTGTCCAGGCGGGAGGTGCTGCCGGCAAGTACGCAACGGCTAG
GTTAATGGGCGTCCGACGGTCTATGTCAAGAGCGCCGGTGAACGCTGCCAACTCGAAGTA
GCAGCAACACACTGGGAAATAGGGACGCAATGGCCCGTTCGGCGACGGTGGAGCCGACTA
GTCCGCACTACTTTGAGTTGGCAGCGGCGAGCAAGGGGACGACGAGACCGGCCGATTGCG
GATTGTTAGAGTTATTTTAGAAAACAAAAAAAAATGACTAGAACTACCCTCACGAAATCA
TGGGTGGCTGATTGTATACTGCTATCTTTCATCTTTAACAGTACAAGGTACCATAAAAAA
GCTCTTGAATAATAGACACACTGCGACTAGACTTTCGTTAGCTAAGTAAACGTTGCCAAC
TGTTCTCGACGAACGCTGGTAGTGTTTTCGCCAAAGAGTTGTGAGGAAATTTCTTATATA
ACACTATTTTAAATGCTGGTTTCCTATTTAATACTGAAGAAATATTTCTTCTTTATGTGG
TACCGAGTGTAAATATTATGTCTTATCTAACATTTTCGTCCATTCTGTTAGTCCACGCCG
TTAAAGTGAACTTACATTGACGAAACTGTCCCTATTCATAGAAAAAAAAAAGAGAAAGGA
GAGAAATCCCCGGCCCCGAGCGACGCCTCTCTCTCTCCCGCGACAGGACCCAACCCACCC
TTTCTCTTGTTCACCCTAACCCTAGCGAGATGGACGGCGGCGGTGCCGCATATGGATCCG
TGCCAGAGGGGCCAGCCAGGCCACGACGCCGGATGGATCCGGCAAGGGCGCGACCCCGGA
TGGCCCCGGACAGGGCGCGACCCCGGATGGCCCCGGACAGGGCGCGACGCCGAAGGGGCC
GACCGAGGATGCAACGCCGGAGGGGCTGGGGCAGGGCGCGATGATGGAGGGGCCGGGGCA
GGGCAACGAATTTAGGTTTGTCGTTAACTTGCATGACAACACATGTTCTTGTAGACAATG
GCAAGTTTCTGGTCTTCCTTGCAGATATGCTCTAGCATTCATCACATCGCTTGCCAATGC
ACATATAAAAAACTTTGTGGAGTTGTATTACTCCGTTGACAAGTTTATAGCAGCTTATGG
CCAACTAATCCCTGCTATGTGTGACAAGACCCAGTGGCCTGAATCTAACCATGGATTCTT
CATGCATCCACCCTTGCTAAAAGCCCTAGCTGGTCGGCCCAAAATAGAGAGGCATAAGGG
TTGTGGGTGAGAAAAAGAGGAAAAGTGACCTGCACTTATGCCCTATTTGTAAGGAATACG
GGCACCATTGGAACAAGTGCATGAAGGGGAACACAGATCACATTGCTGCTTTGATGGATG
TGAGGTAATCAGCTATGCATTTTACTTTCTTACTGCATATTAACTACTTTCTTGCATTAC
TATTTTGTATTCAACTATGCATGTGAACTACTTTCTTAATGCTCGTGTAGAGAACCACCA
AAGAATAGGGGGGAGATTACCAAATCAACCAAGTCATCCATTGTGCCAAGAGGTGATGAA
GCACCCGCAACCATGTATTTTTCACCAAGGTTAATAATACTGCACCTATTCATTTTGCAA
ACGGAAAATGAGTTTGATTAGTGCCATATGAGATCTGAGTTTGTTTTGTGTGTCCCAAAG
CTTAGAAATTACAACCAAAAAGAAGGGAAAACATAGCCAAACCTTGAAGACTATAAATAA
GAAAAATGGAAAAGGGTGTAAAAGGTGACTTTTCCTAATTCTGAATTTTAATATCACATA
TAATGCATAGTTCATGTCGTTATTTGATCTGAAATTACTGCTGCAATACACGTACAAGTG
TAGATCGACGAAGGGGAAGAAGATGGAGCTTGCTAAAAAGGATGAAAGTTGTGCTATGGT
GCCATTTGACAGCCCTGTAATGGACACTAGAAGCAAAAAAGACTAGCCCAACCAGCTATG
CAATGAGCACAAGAAGCAAAAGAAGGCTTAGCTTGTGAATAAAATTTCATTTCTTTTGGT
TAAAGTCACTTCTGTTGCTGCTCGTGTCATATTGTGTGGACTCATGTATGTGAAGTTTTG
GTCACTTGGACTATGTACGCGAACCTAGATATGATGACAATCCTTTTGTGTTGCTCATAT
GATGTGAACTTGGATGTTGGACCCTGATACGTCCATTTTGCNNNNNNNNTTCATGTTGAT
ATTTATCGCTTCGTAATAACTTCGTAT