morexGenes - Barley RNA-seq Database

Contig contig_64040
Source Contig contig_64040
Contig Data
|Contig Location|
|Microarray Probes|
|Predicted Genes|
|CDS Structure|
|DNA Sequence|
morexGenes
Links
Map Locations of contig_64040 (8999 bp)

Morex x Barke POPSEQ 2013	Oregon Wolfe POPSEQ 2013	Morex Genome Release 2012
		No map location
Predicted Genes from contig_64040

Gene ID	# CDS Predicted	Max CDS Length	Probes in Cluster	FPKM by Treatment	FPKM by Replicate	Top Rice Hit
MLOC_73614	1	1614 bp	MLOC_73614.1	Available	Available	LOC_Os04g45020.1, FRAME:+1, EVALUE:2e-117, 13104.m04507 protein MYB family transcription factor, putative, expressed
CDS Structure of MLOC_73614

Contig Sequence (8999 bp)

>contig_64040 8999 assembly3_WGSMorex_rbca.fasta
AAGCCATATCAAAATAACTAGATTAAATGACAAATTTAATCCAATCCTATCACCACCAAG
CAAGCATGCGAGTGAATAACTCACTCCCGGTGGTGAGCATCATGGAACTGTGGATGAAGA
AGTGTTGATGATGATGATGACGACGAATTCCCCTCTCTAGAGCTCCAAATAGATACCAGA
TCAGCCCTCCCAAGGAAGAACAGGAGGTGGTGATACCTCCGTCTTGTAAAACGGAATGAA
ATCTTCTCTTTGATTTTTTTTCTCCACGAAACGGAACTTATAGCATCGGGTCAGACGGGG
CTACGAGGGGCCCACAAGCTTAGAGGTTGTGCCCTCCAAACTTGTGACTCGTGGGTGGCC
CCCTCTGGTGGATCTTCAAGGCAATATTTTTATTGATTCCAGAAATATTCTTCATAAATT
TTCAGCTCCATTCGAGAACTTTTATTTCTGCACAGAAACAACTTCATGGTAGCTCTGATG
CAAACGTCGTGAGTCCGGGTTAGTTTCATTCAAATCATGTAAATTATAGTTCAAAACAAG
AGGAAAAGTGTTTGAAAAAATAGATAAATTTGTGACGTATCGAAACGGAAGTAGGGAAAC
TATGATGGTGTCGTGCGTGGTGTGAAGTAATACCTAGAGAAGAATGTATCATGTACTTGG
GTCCGCCTGCTTAGGCACATAAAGATTAGCTTAGGTATACGACATGGAGCTATGTTCGGC
ATATGTAGCACATATAGTAGTAGTAGTGATGAATCCGGATTCCGAGAGAACACCTCAGTG
CTCAAGCACTCACCTTGTTAACTTGTATATTTTTAACTTTTCGTCTATATTTTATATAAA
ACTCAATTTTATTTTGTTTTCATACCAACTTATAGAGTAAGATATTTACAAACTTCGGTT
TGGGTGCATACAGAACTACGTCGGTGACAATGTATTTGCGGGATTAGTAGTGCCTTCCTT
TTTTCCAAGCTCTGGGTTTGACACTTCACTTATCATGCTACAACACCATGTGCTCTTGCA
TGACATCATGTATATAAAGGGGAGTGTGGTTCATGTTTCAGGTTGATCCTTTTCTCCCAA
CTACATCCACCACCGCCGCTCGTCACACCCAAATATTTAGTAACCGAACCTAACAGTATG
TCATCCGACATTACTCTCCGTACGTGTGGATACCTTGGAGGCACTGCCCCTATGACGCTC
TGATGAACTATTCAAGGGATCCACGAGGAACTGCTCGAGGGAGATCGGCTACTTGATGAG
GAGATGCAATAGCCAATCTACAACTCGTGTCACCAATGCTACTTTTACTAGAAACCCCGA
TCCCTGATCTATCCCGAGCAGTATGTTCTTGATTGCGCTGTAGAAATTTTTAATCTTCAC
TAGTGTATCGTTTTGTGTATCCCAACAGGGGAAAGAGAGAGGCGTGTGTGGGCCCATAAG
AACTTGTGGCCAAAGTGCGTATGAGGGGCGAAACGGTCGATCAATCCCCAGTTACAAAAG
ATTTGCCTTTGTTATATGTTTTCTCTTTCTTTCCCCTAAGACCCGATATGCGATACCACA
TAAACGAGCCAAATCTCCATTTATATTGTTAAATAAATATAAAATGAAAGCCAAAGATTA
TATTATGCAACTAAAAGGCTTGGATTTAATATACTCTTATAGTAATAACTTGAGCATTGC
TCAATCGCCCTAATTCAAGTCCTAGGCCGAGGTCTTTTGAGTGATGTCCCAGAATCTTGA
GAAGAGCTCCCCCAGCCAAAAGATCCGGGCCCTAGTCTTAGACACGAGTGCTCATATCTT
TTGAATTTATATGAAACTTATCTACACTATTCTTAAGTGGTATTGCATGCCCCTCAACAA
AATAGGTGCACTTCCATCAATATAAAGATCAATCATCTTAGTCTCTCGATGATATGAAAA
TCAGCAACAAATAGTGAAAATACAATACAAAATCACTAATCATGCGTAATTTTGTTTTCA
TATCTCCTAATTGAATATGAATTTTAAATTCCACATGTTTATGCAACATCACTTTTCTAA
GATATTGTATTTGTTTGAGAGTATTTTCAAGCTTTCATACATGAGTTTTGTGGAGTTTTT
CATTGTAACTAGATTTCCACAATATACTTTATCTAGATTATGGGAGTAGTAGGGAAGCTC
TACAATTAAGTATGGTAAATTACTTTTTATTTTGGATTCTTATTTCTCTTGAACCGTTCC
GATATATGGTGCCAACAGGAAAAAAATACATTATTTATCATGATTAAAATTAGGGTAATG
CAAGCCACACAATTGTACGGGTCAACCAACTAGTTATTTCTAAAATAAATATCAACCAAA
ATTGCCCATGGTTTACCTTCTATAGGTCTAAGAGGACAGAGAATTATAAAATTGCAATTT
GCAGGACTTTTAATTTGGTACCTCCTCTCTCCTCCAAAGATTGTGACATGTGCCGCTTTT
ATTGATTCAACCCCTCACTCCACGGAACCTTGACACTTCTACTTTGAAAAATTCTGATTG
AAGCTATACAATTTTCATCAAGCCTTGGTTGATGCCTAGGCCTCCGTAGTTCCCAACATA
GACCCCTTTTGCCGTATATTTGTGTGTCTTAAGGTCACTGCTCGATGCGTGTAACGATGG
AGCAACAAGTTTGTGAGTCATTCCCCCGCAGAGTCCTGATTACGCTAAGCTCATTGATGG
TTCAAGGTCGTGCGGGATGCCCGTCCCCTCTTCCCGATCGATACATGGATGTACCTTAAG
CTAAAAGGATCCTACCTTGGGCTCGCCTTGCTCGATAAATCCTATACACCTCAACAAACA
CGTCTTTACTATCTCAAGCGCGCGACACCAACTCGGCCTTCTTTGGCTCCAAGCCGTGCA
CCACAAACAAAGAACATGATCTTTGAGTTACAACTGAGTGATGGCATCGCTTCCATCCAT
GAGGACATGGAGCTCCTCATATGTTCGAGGCTTCACCATCGATCTCAATGTGCTTGATTC
ATGGCCGTTTGATCTCAACGAACTAGAGCAATCATTCTCCAAGGAGCAAATTTGGTGGGC
CATTAGGAGGCCCCCGAAAGGCAAGGAACCTGGGCTACACAACTTGTGTGTGTTGGGATA
TTACCAAAGGTAGACATTTGTGATGCCTTCGCCAAGATATATGCTCTCAATGATTGAGGC
TTCAAAAAACTTAACGAAGCTCTCCTCACCTTGCTCCTCAAGAATTCGGACACACCGTCC
TCTAACTATTGGCTGATCAACCTCATCCAATTCGTCTCCTAGCTCTTCATGTAGCTGCTT
TTCCATAGACTCGTGTCGTGTCTCGAAGACATGATATTTACCAACCATACCGCGTTCATC
GTGGGTTGGTCCATTTGCGGCTAGTTTTTTGCTCGTCCACGGTCCACCAAACCATGCGCG
AGATCCACAACCTCAAAAATCCATTTGTCAAGATAAAGCTGAACATTGCACGCGCCTTTG
ACTCCATCTCGTAGCCCTTACTCCTCGAGACACACCACCACATTGGGTTCGATCACCACA
GGTGCGAATGGACTAGTATCGTCCTCTTCATGGAAATCATATGTGTTCTCCTCAATTATG
TCTCGGGTCCACCGATGCAACACCAAAAATTTCTCTGCCAAGGGCCCCCCTCTATCCCCA
TGCTCTTCGTCATGGTGATCGATGCCCTGAACAACCTCATCCATCGCATCATGGCCGCTG
GGGCTCTCCACCCATCACATGGCCTCGATTTTTTTTCATTTATGCCGATGACGCGATCAT
TTTCCGTCGCCCAAAAGTGCATAATCTCACCGCCTCCACAAGCTTCTCCATGTCTTTCGG
ATCGTTTTGGTTCACGCACGAACTTCGCCAAGTGCTTCAGTACCTCAATCACTACACGCG
ACCAACCATGTGGGTATCGAGCGCAACCTCGTGTGCCCTATTGTAGACTTCCCTACTAGG
TAGGTAGGGTTGCCGCTATACATTCGAAAGCTTCCCACTTCATCCCTTCAACCCATCATC
GACAAGATTGAGCGAGAGCTTTCTCCATGGTGGGTCTCCTTGCTCTCCCAAGGCAAGAGA
CTTTCTCTCAGTCACCATGGCTCTATGAAATCATGGTTCACATCCTTCCCGCCTTGGCAA
TCAACCATGACATCCTCAAATAAATGAATCGGCTCATCCACAACTTTCATCTAGTATTGT
CATATGGATGCAAGCGATGGATATTGCCTTGTTAGTTGGAGCAAGGTATGCAGGCCGATC
GCCCTTGGTGGCCTAGGCATCCTTGATCTACAGCGCCTTGGAATCTCCCTCCATGCTGGC
TGGCTTTGGTTTCACTAGATCAAATAGAGGCGCCAATGGCAGAACCAACACATTCCCTCC
TTGTCTGACCTCCAAGTGATCTTATGCGCTTTGACTTTCTGGGTCCTGGATGACAACTAC
TCTTCCAATTTTGGAGAGATCACCGGATCGATGGTCTCTCGATCATGGAGTTCGCCTCAC
TCATCCTCTCCATGGTCCAAAGTCACCGCCACAAAGCTTGCTCTATTCGTGGAAGCCTTC
TTCAGTATGCTTGGATTCATGTCAAGGGTGTTATCGGTCGAGTGGCTTTCATGCAATATG
TTTGGCACCGCCTAAGCGATGTCGTCCTCTCCAACGTGCCACACACTCTCATACGGTGTT
GGTCTGCCAATGGGTTATATAGCACGAAGACCTGCTACCAGGCGAAGTTATCGGGCACGA
TCACTTCTCCTCATGGACACCAAAGTTGGAAAACCTGCCCAACTCCCACTAAAGCAAGAT
CTTCGTGTGTGTGGCCCTCCCAGGACGATGCTGGACTATGGCCCAGCAAGCCCGACATGG
CCTGCCCCACAATGACGACGACTACCCTCTTTGCGAACAGAAATCAAAAATGCTGCACCA
CCTCTTCATTGGATGTTCAGTTTCATGCTAGACTTAGCATCAAGTGTTGTCTTGGTGCCG
CTCGAGAGCTCCCCTCCCTTGCCAGATGATGAGTTCATGAAATGCCTCACGAAGACACTC
TATGACCCGACTTCTTATTTTCGCCGATATCTCGTCTCTCTCGTCATCCTCGCCATCTTC
CTCACCATCTGGTGGATCTAGAAACACTAGAACAACTACATATTCAACGGTGAACGTCCC
TTGTCACGCATCTCATGCAGACCATCCAGGATGAAGCATGCCACGAACCAATGCTAAGGG
GATGCCTTATGTGCATGGCATATCACTCACCCCGCGACCATGTCAGTGCTTGTCCTATTG
TCTGATCAACCTGTATTTTCTTTTTTTAGCAATATAAAAAGGTAGGCAACCCTTTAATTT
TGCGTATTTGTGAAAAAATGGATTTCTCCTTCTACAATTCCAACGCCTTTTAGATTATTA
TATGCCAATAAAGAAGCTTTACTAAATATACGAGCATTGCAGAAATCAATGGATATGCTA
TCTCAAAGAGTTTGTGAGCACTAAAAACAGTCGGTGGCTAATCTTTCTTTATCCCCCCAC
GTTAAGGCGCCCAGCAACTCATCATTTGGTTCTATAAAGTCCTGCGTGGAGAGCCCTCAC
GCCAAACGCAGAGACCGACGAGAACAGTGCAAACAGCACAGCAATCGCAGCCCCTCCCAC
GCCTCTCAAACCTGATTTATTAAACCTTAACGTCCTTCGTTACTCCTACTTGCCCAACAC
CGCTCGTCCTCCAACTCCGGTGCGGGCGGCATTTCCACCGTGGTCACCTCCGACGAACTG
ATGGGGTGCAAGTCGTGCCAGAAGCCCAAGGCGCAGCACCGCAAGGGGCTGTGGTCGCCG
GAGGAGGACCAGAAGCTCCGCGACTTCATCGTCCGCTACGGCCACAGCTGCTGGAGCACC
GTCCCCGTCAAGGCCGGTAAGAAAGCCATCGCACGCGACTGTCCCGAGAAATTCGAGGGG
GGGTTGAACTTTTTCCTTTTTCTTTTTGTTTAACTTGCATCGCCGAGAGTCCAATTCCCA
ATTTCGCTTCCTTGCTTGCTTGCTTGTTGATGCTCTGCAATGTACCTTGGCTGGCTCATG
GGAAGGGGAAAGTTTGGGAAATCTAATTTCGCCAGAAAACAGTTGAGGAAGCTCTTTAGC
TTCGTCTGCTTGTTCGAATTCAGCAAAATTCTGCAGTGCTTTCGGAGAAGAATCCAGCGG
AGTCTCGTCAAATGTACCATGGCATGTGGTGCGGGGCCTAAAGCTTGCCGTGAATGAATT
TTGCAGGGCTTCAGCGGAACGGCAAGAGCTGCAGGCTGAGATGGATCAACTACCTGAGGC
CGGGGCTGAAGCACGGCATGTTCTCCCGGGAGGAAGAAGAGACCGTCATGAGCCTCCACG
CCGCTCTCGGCAACAAGTAAGCATCCCAAGCAGAGCACACATCCCAATTCTCACCTTCTC
AGAACAAAACGACATCTGGTTAGCATGCGGGATTGAATCAAGTCAATCAGTTGGTATTTC
TTTCTTCTTTCCTTCTAAATTCATCAGTCCGTAGGAATTTTAGAAGAATAAAACAATTAG
AGTATTCTTGCGCATGCTACATTTTGCTACCTACTGCTGCTTGCGCCAAATTTGCTAGTG
TCACCATGGTAGGGTCGTAAGAAAAAGGGAGAAAAAAAGGTTTTGCTGGTGAAAACAAAT
GGAAATGCTGATGTCTGCCCTGTAGACCGCCTTACGTGGTTGAGTTGATGCTGACACCTG
CTTTCAATAGATCCTCAAAAAAAAAAAAAAAAACACCTGCGTTCAATATCGAGGCACTCG
TTTGTCCGTTTGGCGATAGTGAACAAGAGCCTCACTTTCACAAACCTAGCTACTGGCTGG
AAAGGTTGCTTGGTCACGGATAACCTCTTTTTGGACAAAAAAAGGAAGAAAGAACAGCTA
AACTTGTGTCTAATCTAATGCTTCCTTTTCTAAAGGGTCTTTGCAGTTGCCTGCCGGTGC
AAGCAATGTCATATTTAGTGAGGTTCTTAATTTTCATAGTGAAGATATCTTTTTTTTTTT
TTTTTTTTTTTTGCGATGACATAGTAAAGATATCTGTAGTACAATCATTTGTGAACACGC
TTGTAAGACTAGTCAACTGTTGAGGCCAATGATAGTCTAACAGATGCTTTGACATTGACA
ATCCGAACGGAGAAGACTTGTACTATTGCTACAAGTCTGTGACAATCATAGCTTTGTTTA
TTGGAGTGACTGCACAATGATTTGCTTGTCTGACATGGTGAAAATTTTCTCTGGCGCAGG
TGGTCTCAGATAGCGCAGCACCTGCCGGGCCGGACGGACAACGAGGTGAAGAACTACTGG
AACTCGTACCTCAAGAAGCGCGTCGAGGGAGCGCGGTCACCAGCGAAATCCGCCGGCTCG
GGCGCGCCCCGGAGCCCCACGCCCAGCAAGAGCGGCTGCGGCCGCAGCACCGTTAACCAG
CCGTCCAGCTCCGGCTCATCCGGGCCGCCCGAGTCGTCGACGTCGACGTTCGACGAGTCG
AGCAGCCTCACAGTCCCCGGCGCTGCCGCCTCGATCCGGCCGCACGCGCCCGTGCTCCCC
AAGGTCATGTTCGCGGACTGGCTCGACATGGACATGGACTACGGCACCGGCCTGATGGCA
CCGAGCGCTCTGGCCTCGGCCTTCGACGGCAGCCCGGCGCAGCAGGGCGTGAGCCACCAG
GGTTCCGTGCAGGTGGAGGACCTGTGCGGCGCCGTGGACTCGTTGCACGGGCTCGGCAAC
GGCGGCGTCTGTTGGGAGTTCGACGCCGGTCAGATCGACATGCAGGGAGGAGGAGGATTC
TGCGACCTGCTGTCCGTGAGCGAGTTCCTCGGGATCAACTAGGCGATTCCTCCCAATGGT
GTGCCACCGTCACTGGCTCGCTGCCTCTCCATCACGACCAGCCAGTGATTGTTGGTCACT
GACAAGAAAGTTCTCAAGGCCACGATTCAGTCGTGCCAGCGGCATGGAGAAGAAATCGTT
GAAGTCGTTGTTGCCGGAAAAACACACATGCCCACAGAACGTGATGGAGATGAGGCGGAG
GAACAAACTGCAAAAGAAATTCGCCGTCATCTTCATGCTAACAAATATTGCAAACCCTTA
TGTCTTCGTAGTTGTAGTACAGGTTAGCAAAAAGTCAATGCTGGCTTGCTGTAATTTGTT
AGAAAGTAAAACAAGAAAGACAATAGACATGGATGTAAAGTGAATGGTTGTCTTTATTGA
TGATTGAGTACAAGCATATATAACCCCGAGAGGATACATACAATAGACGCGATGGTCTGG
AGAGACACGAGCGAACAGTCATGTCCCTCATACATGACGGCTAGGGATAGTGAAGATTCT
CCATAACTAACACCAACATGGGTTAATTAAACTCAACACTCCTTCTAATCTACGCTATCC
TTATAGACATCACCATCTTAAATAAAAGCTCCTCAAAAACCCCGTGGGAAAATGTGAGCA
GTATAGTGTTTGATATGTTGCTACAACTCATTCAAACCCAGTGGAAAAAATAATGAGAAA
ATGATGCAACATATAATGGTTATTGTCTTTTTTAACTCAATACGAGAAAACCCATAGAGT
TTATACGACAATAAATATGTCGTATATACTTTCCTAAAAACCCAGTGGGAAAAACAGAAA
GTATGACATTTGATCTCATGTTGATATTACCTCATTAAAAACCTTTATGAGAATCTCTAT
AGTAAACTCATGAAGGAAAAAAACAGTATAATATGATGCATGGAACGGGAATAATTGAGG
AAGATACTCTCCCTGATTCTTGCAAATTTCGAAGCTGTCACATACCCATTCCAAGAACAT
ATTTCTGGAATGTAAAAGTTGGTAGAGACTTCGTGAGAAATCAGTCACATGATTTGATTT
GCAAGATATGCATATAGTGATGTTGCTTATTGCGTAACCTGTTTGCATCCGGACAACACG
AGAAACATTATCGTCGAGATAATGGTTGGTGGATGTAGCTGATGGGGTTATAGTCCTAG