morexGenes - Barley RNA-seq Database

Contig contig_64006
Source Contig contig_64006
Contig Data
|Contig Location|
|Microarray Probes|
|Predicted Genes|
|CDS Structure|
|DNA Sequence|
morexGenes
Links
Map Locations of contig_64006 (6507 bp)

Morex x Barke POPSEQ 2013	Oregon Wolfe POPSEQ 2013	Morex Genome Release 2012
		No map location
Predicted Genes from contig_64006

Gene ID	# CDS Predicted	Max CDS Length	Probes in Cluster	FPKM by Treatment	FPKM by Replicate	Top Rice Hit
MLOC_73598	1	1632 bp	AK360353	Available	Available	None
CDS Structure of MLOC_73598

Contig Sequence (6507 bp)

>contig_64006 6507 assembly3_WGSMorex_rbca.fasta
CCGGGACTAATGGGCTGGCCAGGGCCGAACGATAGCCATGTTTTCTACTAGTGTTCATGA
CATGGGTTATGTATACACATAGTTTCATTTTTGCGTGTAATGCACTCGTATATAATGCCG
ATATACGTGTTGCTCTGGGTCCAATACATGTTCCATGGAGTCCGTTAATAATGGAGAACA
AGAACGAAGATACACATATAGAATGGATGAGCAAAAACGATTCATTATGTCATTGTTGTA
TTGTTCTTCTTAGTTCCTGTTTCTTTTTATCTTTCCGTCCCTTGAAAAAGAACATCCTTC
TTTAAGCATTATTTCTATCGAGGAAAGAAAAGAGATCATCTTGTGTTCTTACAGATTTAA
GGCCTTGAAAGATATCAATATCTGCAGAAGTACATTTGGCGCAAAAAATTACATATTTCA
AAAAGGTTCGCTTTATTATATATTTGGTTGTGATCTTGTTTCTTTCAGTACAATCCTTTA
ATGTCTCGTATAGTTGGGGAATCTCATCTTTGATGTTCGTCTTGCTCTTATTTTTGTACT
CACTAGTTACCATGGAATAACTTTTCTTCTCGATAAATTGAGCTTGTCTAATACTCCCTC
CGTTCTTAAATATAAGTCTTTGTAGAAATTTCACTAGTGGACTACATACGGATGTATATA
GACATACCTTAAAATGTACATTCAATCATTTTGCTTCGTATGTAGACATCTAGTGAAANN
NNNNNNNNNNNNNNNATTTAGAAACGGAGGGAGTATGAAATGGTAGGAAGTGAAATCTTA
CGATGCACGTGAAAAAAGTGTCTGCATCCTCAGTATAACTTGGTTTGATAAGAGGCAACA
CTGTCTCTAAGGTAGGTCTCACATGTGATGCTTCTAACATGACAATCTTGCAGAGTTGGC
ATGTAACTCTTGGTCCCACCACTGCCTCTAAACATGATCATTTTGTTTGCAATATTTCCC
ATTTGTATGTGTTCACAAGCAAATAAATATATTACTATTCTATTTATTAGATGCATTCTC
TATTTTATTTTTCTTCCTTAGAGGCAGTTGTGCATAGTTTATAGAGGCAACCTTAGAGGC
AGAAATAACATTATTGCATGCTCTAACTATTACTTCCTCCGTTCCTAAATATAATTCTTT
TAACAGATTTCACTAAAGGTCTACACACGAAACAAAACGAATGAATCTACACTCTATAAT
ATGTCTATATACATCTGTAGGTAGTCCATTAATGAGACATTTTAAAAGACTTATATTTAG
AAACGGAAGTACCAAGAACATCCACAATGTATGAGTTATGCTACCTCTAAGCCCCATCTC
CTCCCTTTTAGAGACCGTCTCTATACATTGCGCCACTTGCCTTTGCCTCTAGTATCGCCT
TAAACAACTAAAAATTCAGCCAGTCCCACTTGTCAGCCTCAGGAAGACATAAGAAAGTCC
AAGAGAATGGTGGTTGGTTGAAAGTGTGGTGCTATTCAACCTTTAAAAAAAACATGCAGG
GACAGGGTTGCCAGTCTCTATACATGTATACCCTGAAAAAGGGCAAAAACCGACGAACAC
ACCACGACATATGCGGCGGCAACAAGAGGTTGGCAGGCGGAGAAGAACCGGCAAAGGCAC
AATCCCTTCGGAGGAATCTCTCACGTATGTAAAAAGGAAAAACGGATGCACTGATGAAAA
CCAGTGACCTTTGGCTTTGGGCAAACACAGGAGGCCGCCATGAAAGCTGCCCGTCCATGA
TCCATCCATGCACCCTCCCCTCGTCGTCGTAGCACCATGCATGCATGCATGCATGCATGC
ATGTCTAGCAAGCGGCCAGCAGCGGCACTCACAGCAGGCAGGCATGCACCACTGCAGCAG
CGAGAGAGCCTGGCACTGCACTGCACTGCACTGCGCTTTCGACTGCATGCATGCATGCAT
GCCCTGGATTCTTGCCGGTGCAATTATTTTCCCGTCGAATCCAACCAAAAGTGTGCGTGG
CCTTTTCGCCATGTGAACCTGCCTTGTTTTCTCTAGCCTAGGCCAAGTTTGGCGGCCGCG
CTCGTGAGCCGTAGCCGGCAGCCGCGTAATGTACGTGGGTCCGAACTGACGTACGTACGT
GGCTTGCCCGCTGGATCCACATCTCCCGTAGAACAGAACGGAGGACGGAAAAACACTAGT
AATCCATGCTGGTCTGTTGCTTTCAGCCGCTCTGTTAACACAATCATGCACGTCGCATCG
CATGGGCACTTGATAGATATCCTCTCGGGCAGCCAGCTGATCATCTTCATAGCCCGGTTT
TCACTGCTCAATTTCAGTACTACAGTTTATAGCCTATTTTCAATTTCTTAGAAGAATGTG
TGCATGAATGTTGATGGAGAAGAATGGGACGTGTTGACTTGGTTGCGACGGATTGAGCTG
GAAGCCACAACAAGAGCACTAGTACGACTAAACCTTCCACTTAGTGAGTCTCAAGATAAG
AAAACCCCATCCATTACAGCATGGCCAGAAGAATTCAGAGTCCAACCCAACCCAACCCAA
CCCAAGACCAACACCGGAAATGCGGTGGTCAATCAAGTTAGGCACCGCAGGCGCAAGTGC
TACCGGCACAAATCAGCGCAACCAATACGTACACTCGCTTGCGATGTGAGCTCCACCTGC
ACGCACAAAAAAAATGCAGCACTTGCTCTAATCTTATTTTTACTGCAGCCACTTTTCCAG
GCGATGTGATGACGAGCCAGTGTGCCACCGAACCGCACGCAAAAAGTTGGCATCTTTGCA
CATCTTCCAAGAGCTAACGCTTGGTTACACACTTTTCTCCAGAAATCAGAATACAAAAAC
ACATGCTGGTGCTCACACATGCACACAACTCAACAGAGGGGTTGGTTGGTGACCATGGGA
GGAATAGAATAATCCGAGGCACAAGAGAACCCAAACCAAACAGGCCTGTTTCTCTTCAGA
AACTTGACCACACTCCTCCCCAGAACGGAACCCAGACCAACATCTCTCCGAGGCAGAGAA
CAAACCCACATGTCAAACACTTGCCTTACCTTACCTAGAAATTAATCAACTCCTCGAACC
AAAACTTGAAACCAAAAACCAAGACAAAAAATATGGAAAAAGAAGAGAGAGAGGTGTGAA
CGAACTAATTTACTGGACAATACATGGGCGTCAAGGGGGTGCGTGTTGTCGTCTTGTTAG
GGCATGGATGGCATTTTAGTTCATCACATTTCTTGCTATGGACAGTTGGGGTTCTTCCCG
GGGCCCCCGTAGTAGAAGTAGGTGCCCCAGTCGCCATTGTTGCCGTTCTGCACGTCGTAG
CAGTTGGACTGCTCGGTGAAGGACCCGATCCCCCTCGGCGCCTTGAGGTTGTTGGACGAG
TCCACCACCTGGATATTCTTGAAGTAGCTCGACTTGCTGAACCCCTCCTCCGGGAAGTGG
CCGCTGCCCATCTGCGTGGACGTGTGGCTGCCGTCCGGCTCCGTGTTCACCACCTCGCCG
CCCCACTCGATCATCGACGCGCTGTCCGCCAGGTACGAGAAGAGGAAGGACGGCCAGTAG
CCCAGCACGTAGTCGTTGCCGAACTGCAGCCACCAGTTGCCCTCCTTCGGGTCCTGCACG
ATTCGCGCGCGCATAGTTGGTTAGTTAGCGGATAGGATCATGATCAGGAGATAGATGTTG
GTTAGCTTCCTTTTCTGTGCTATCATCATAGTATCATGCACGGGCAAAAAATAAAGCTAA
GTGGTGCTCCTCCGTTATAATGCACTATGGAAAAAGGTGGCCCCCTTTCATGAAAATGCT
TTGGAACTGCTTTTGAAAATGGCCAGGGAATATGATCTTGTTGCCTGTGCAAGTGGCAAA
TGATAACATAAATGGCACATGGCAATGCCGGTGGCAAGTGTTTTGTTTTCCTTCAGAAAA
TGAGTAGGAGTAAGCAAGTGCTTTGGCTGGCAGAAGAGACATATTTCAAAATTTCGATCG
CAGGGACGATGATGATATTATATAACAGGAGAAGCATGAACACAAGGACGAATATTCTTG
AATTTTCAAGTGTAAACTATAGCAAGCATAAGTGTGTGAGTGTGTTAGCAGGGACAGACA
TAGATCCAATACTACTACTTGTGTGAGGACAACTGTGAGAGCGTCCACTGTCCCCAAAAA
AGGACAGAGCCACGGTTGTTGTGGCCTTGACATAAGCCTCGAGAAAGACCAAGAAACAGG
TGGGCATGCACCATACATGCATGTATAGATTCCTCCGGCCCCATTCACGAATCTGATCGG
CATGTGAGGGGCGCTTGTAATTTACCTTCCATACCAAAATGTTGATATCATATTGGGAGC
CACCATAGTTGGAGATAGGGAAGATGCTCGCGCCCATGGCTATCTGGTTGTTTGTCTGGA
TGAACCCCGAGCAGAGCAGGTTGTAGCACCCTGTTGCCTGATACGCATCGCTCTACAGTG
TTCACAACAGCAATACAAAAGTCAGTACTCAGGCCATTCCAAAAGATGGGTATGTATGTA
TGTAGATCTAAGCAAGAGGACAAGAGGGGGATTGATTGAAAGGAATGTGATGTTATCTTA
CAGTCCAGTAGGTGAAGAGCCTGGTGTTGTTGTCTCCATACAAGTCTGGGCTAACCTGAA
ATTTTGTAGAGCACATGAATGAGCCACAAGGGAAGAGACTAACTACAGAGTCACAGCTTA
ATCAATCCAGCATCATAAGCAGTACGAAGTGCTGCTAGTGTATACAGCTCAGAAAGAGAA
ATGCTATCAGAGAAAATGGAGAATGTAGCCCAGTCTAGCTTCTAGCCTTCTATTACTAGC
AAAGTGTAAGGGTCCTTTCACCAGTGCACATATCACTATTGCAACACAGAAGAAATTATT
GAACGCATGCTGCAAGGAGGAAATGCTCCTCCTCATAATTGAGAGCATGGAAGGAGGAGA
AGAAGAACAAAATTGGAAGCTGAAGCACAACATTTATTGGAACTTTTTGACTACTGCTAG
GTGGTTTTCTTTCCCCCCATCTCATGTAGTAGTATGTCTGAGCTCTCACCTGCCATCCTG
CTTCAATGCTGTTGAGGTCCTGCCCAAAGGAACCCCCCAGGATCCAAAGCTGGGAGAGGC
TGAACTCGTTGCCCTGCTGAATGCTTGGCTGCCACACGTTGATGGTGGCCTTGGCTCCAT
AATACTTATCCCCCTCCACATATGCTATCGCATGCTGAGACAGAGTCAAATGACAGGGTT
AAACGAATCAGTGACCACTTGAACAAGCTAGTGTAGTTACTTGCTGAATCTTGAATGGGG
CATTGTTGTACCTGGTGGCCATTCTCATTGAGCATGGCAGGGTCGACAGATGAGGGGTTT
GGGATGCTCAGGTGCGTCTTCTTGCCATACCTCTTGATAGAGCTGGCCCTGAAGACGTCC
TCCTTCTTGGTCCTCCTGATTGGGATGGTGTTCTCTTGGCACATGCCGTTCTGGTGCCAC
ATTTGGGTGATGGTCTGAGTGTGCTGCTTCTGGGATGCGACCTTGGATTCATCATACAGG
CCTTCTGGGTGGTAAGCAGGCCTCGTCTGAAAAGTGCAGCACCACTGAGTGTTAGTATCC
ATCATAATGTGTGGGGGAGAAGCTGTAAAAAAGAGGCAGTAGTGGTGGTGGAGAGAGAGG
AACCTGGATAGTATGGTTCTTGAGCAAAGGGTGATCGAAGGCAGGCTGGCTGGAGATGGG
CACGCAGTCTATGATGTCGCCATCCGGGCTCTGTTGATTTCTCAGAATCAGTTCTTGCAA
TAACTAGTTGATTCAAAAAACAAAGGCATGGTGCTAAATTCAGTAGAGGAGTGCAGATTA
GAAAATGCAGCATTGGCTTCAGAGTGTCAATCACACAACAGCTATAAAAAAACACATCCA
AAATTGTATATTTCGAAGGAACTGAAAGAAGAACACTAGTAGCAAAATATTGGTTTGGCC
CAAAAGTGACTGCTGCAGTTCTCTGTCTCCTCTCCTCTAAAGAAAGGAAAGCGAGGAGGC
AAAAGCAGGCGTGGCTCCTTTCAACGTCGAATGAACCCAAGAAGCACGGGCACCCATAAA
TCTCCCCCCGAAAGCCAGCCTTTTCCCTCCGGCGACGGAGAGAGGGATTAAATGCATTGT
CCTCGACGGATGCACTTGAGCGAGAAGAAGCGGTCAATCAGCGCCTTCCAAAGCGAGCAA
TGCAAGCGCGCGCATGAAGCCCATTAAAAGGCCTCGCCTTTCTTCGACTTCCATGCCGAA
TGCGCACCGTCTCTCTTTTCTTTTCGTTCATGGATTCATTCATTCGCTTGGGCGAGCAAA
GCAGCAGCAGGTTGAACGCGCGCCGTCGTTCTTGGGAGGAGACGAGAGGAGAGGGGACGA
GGCGAGACGAGACTAGAGGGGTGGCATGGATGTACCTCAATGCTGGCGAGCGGCGCCTTG
TTGAGACGCTTGAGGTGGTACTGCACCTGCCGGTGCCTCAGCAGCTGCCTCCGCCGCGCC
ACCCCCCTGCGGCCGCTCCCGGCCGCC