Contig Data
morexGenes
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Map Locations of contig_63943 (6926 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012




Predicted Genes from contig_63943

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_73568 1 1197 bp MLOC_73568.1 Available Available None
MLOC_73567 2 2100 bp MLOC_73567.2 Available Available LOC_Os07g17300.1, FRAME:+2, EVALUE:1e-26, 13107.m01814 protein conserved hypothetical protein
MLOC_73569 1 1993 bp MLOC_73569.1 Available Available None





CDS Structure of MLOC_73568






CDS Structure of MLOC_73567






CDS Structure of MLOC_73569






Contig Sequence (6926 bp)

>contig_63943 6926 assembly3_WGSMorex_rbca.fasta
TGGATTGGAGGGTTTACAGGATAATAAATGCTCATTAACTTGATTTTAGTATCTTTAGTA
GTTGGATCCAAGCATGGGTGAGGCTAGTAAGTTTTAGTCTGACTACTTTTAGTCATGGGA
CTAAAACGTATCAAGCACCCTCTAATTTAGGCCCTCGTCTATTTCAAAGGCGGCTAGATA
ATGCCGCATACTAATTCATCCAATCGCCGAAGAGGACCCCCTCCACTCTTGCGTTGGCTC
GATGGGTATCATACCGTCGACGAGTAGACAAGCTCGCTAAGAGCATAGCACCAAGAATGG
TGACAACGAAATAAAAAGGAGAGGAAATACAAAGGGTTGTTTTGCAAACAACAAAGCTAA
GGCCACACGACACCTAGGGGTGTAGAGCAGCATCCCGCGAGAGCCCGTCATAGTACTTAG
TTAGCACAAATTAAGCTAGAACCACCTTAGGCTGGCTACAACTAAGTCTGTCTAATCTTG
AGTACGGAGCGGGACGGGTCGGGTGCCGCCTTACATCCCTACCGACACCACAGCTACCAT
TGACTGCCTCACAACCACACATCGACCCGCATAATAGGGGCAAAACGTTCCAAGGTCTAC
GCCTCCAACAAAGTAATGAGGTTGTAGCACCGCTCCGACAAACGGGGACAATGATTTTCA
TTGGGAAAGCGAGGAAGATGAGTGTGTAACCTCGACCAGGCCTCCTGGGAAGACATTGAT
GTCCAAGAATATCATCATTGTCGGTACTTACCACTATCACGAGGGCACGGCGACACCCAT
CCATCGAAAGGCCTACCATTGCACCCGCTAAAAGGAGCGAAGGGAACTGGTAGTCAAGAT
GGCACCCAAATCTAGGCATAGTAGATGGCCCGCAAACCACGAACAATTGCCAGGAAGACC
ACTTTGTTTCCTTAGCGGCCAACCATCACTCCAGTTTGCAATGCTCACCCTTAGGACACT
ATCGTGACCACCTTCCAGGGCCGCCACCATGGCTTCCAAAGCCCACATCTTTACGGCAAA
AGTAGGAAGAAACTATATTGCCTTCACAACCAAGAGACCCAATGTCGATCAACAGATCTC
CAAGTGTGGACCACCAGTTTGCAACAAAACCCCCCTTAGAACTATTTTATTGTCCTGGTC
CAAGCACCAAAATACAACTTCCACATTGGGTGCATACTCACACACACTACTAGCTAGCAG
CACAGAGGAAAGAGAGGTGCTCCATCCAAACTTCCAAAGTGAACCGCCCCATCATCGTGT
CGCTAGAGCTCCAACCGCAAGAGGTGTCAAGTTATGATCCATAAAGCACCACTAGCAAAC
GAGGGTGTCGAAGGCGGCACTGGCTTTGGTCATCCGGAACGAGTATCTCATTGTCTCCCA
ACCACCAAACTTGGGTTCGCCACCCGCTCCTTTAACGGGGTGCACATGGAGAGCATCTCG
ATGTCGATGTCGTCAAGCTTTGTGAGATATCCGGCTGCCACTCAGCGAGGATCCGAGTTG
GAGGGGAAAGTATTTGGTGGGATAGATTGGTCATCTACCATGGCACTCGATATGGAGCGA
CACGGGGTCATGAAACCATTTCCGCATAAGGTATATGTGCTGCATAATTAGTAGATAAAT
TTGGAAAAGTACAGATTTCATTTAATTTTGTGTTAAAAGGTAAGGCATTAATTTGTGACC
AAACTCAATTCCCCGTGTGGCCCATGATGACTATTCCTCAAAAAGAAAAGAAGAGATGAT
AACATGGACATGGAGTATTTGAGCTCGAACTCTAAAGGGCACTTTCGTGATAACATAAGC
TATGATGAATAGCCAATAAGCTTCCCCGTTACTGAAGTGGTGGAAGGTGAACTCTAAACT
CATATGCTTTATCTCTTGTTGATTCTCATCCTTTCAAACCAAACAACTGATCTTGTATCT
CACTCACCCTAAATTCCCATTCCTTGCGTTTAATAATCTCTAACTAAATAGATAGATGCA
TTCAAACTTTAGCTACTTTCACTGCGTAGGTAAAAATAATATATTTATATTTCCGTCAAG
GGTAGTTAATTATATTGTACATCGTTGTGTCCTAGGAATACGATTATAGGAGTTTGTGGT
GAATGATACCTAGGGATCTTATTGATGTCCAGAATGACATAGTTTTTCTCTTTTGAAATG
GAGGTGAAATATTTCCCTCATCTCATCCATAAGTAAGAAATTTACATTATTTTCAAGTTA
GCCGAAGCATGGCACATAAACATCTATCCTCAGTTCAACATGATCGACCTCCAATGCTTT
GCCCCCCCCCCCCCCCCAACCCACAACCGTGGCCTCCCTTTTTACCTTGCACAAAATGAC
ACTATATATGGTTGAAAGATTCATAAAAAACCTCGCATTCCATCAATTCCTAATTTCCCA
CAAAGTAAACATAAGGAGAAAAGTGACCCACCTCCTAGTATTTTTGTTGATATTGATAAG
AGAATATAACCAACCTTTGACTGACTTAAAGTAACCCCATTTGTCGAATTTGACATCAAA
TAATCCCAAACAACTCTTGTAGCACATTATAAGTCCGCCAGATCAACCTACACTTGAATA
ATAAATGTTTCGGCCACCCCCCCCCCCCCCCCCCTTACAAATTGAGATAAGTCATCCTTT
ACATTGTACTCTATGAGCTCCTTTCTTGCAAAATAAGAAAAGAATATCTTTTTCTCTTAG
ATGATAATATATTTTTCGAAAAAGCAGACTTCATTAACTAAACGCTTTATGGAAACTAGT
CGAGCGGAATATACTAAGGATGTCGAGTACTCTACCGAAGTAGTAAGGTTCCAAACGATT
TAATTCCCGTTGACTGACCCCAGTCAAAAACAATAATCAATGATGTGTTGCACAAAGGGC
GCAAAACTTATCTTAATGTTCTTGATCCATGAATCATTCTCCGAAACATCTCTCTCGACT
GTTAGGGCCCTATAAATGGAAATATCGAAAAAGGATAGCGCAATGTCTTCCCATTTGCAC
CACCAAGACAAGTTGCATGCCAAAAGGCCGCAATTTTACCATGTCTAATAGTGCTCGTGC
TAACATCTTAGAAGAGGTCTATATCAAGGGCATCGCAAGGGCATCCCAACCCTACCCCCT
ATCCGGGTCTTCCCATAAAGGCGTGACCAACATAGACGGAAAAAATCTCCAGAATTTCTC
TAGCTCAACAATGCCAATCCACCGGTAGACGGTGGTCGACAACGAGCTCCCACTTGATTT
GTATTTCCCTCTCGACACCTTGTCGGACCTGCCCCACAGAAAAGCCTACTTCAACTTAAC
ACAGTCTTTATGATTCCTTTACGAAAAACGAGAGGAGTAAGGATGTACATAACTTGTGAA
TTAGGGACTGATAACCTTTTTTTTTCTTTGCCATGACATGCAAGTTTTTAATAAGTTTGC
ACATGATTTTTTATACACTTTGCAAATGATGCACTGGCAGAGGTTAGTTTGCCAGTGAGA
TCGATGCACGAAGAACGTTAGTAGGCACTAAGATCTTTTGCACGTTGCTAACAAGACCGG
TAACCTCATCAAAGCTTGCAACAGGTTGCTGTTATCTTCTTTGATAGGCACCACAATAAT
CGCCGTGGTATCCGCATAAAGAGAGGTGTGAATACATACACCCCGACCTCTTGATCTGTG
GCGACCAATAGACGTCGCAAACCGAAAATCTACTAGTTAAAGTGGTCAGTTCGATAGTAC
ATGATTGACATAAAAGACGGGAAAGGCTATAATAAAGAACAAAAAATGAATTTGAGGAGA
AAATTTATCTACAATAGATTGAATTCATCGCATTATTTTGCTTATGTACGCCGTTGCCAA
CATCATTTCACTAATTTCTTCATTGTCAGGCACTATGGAGATATTGAAGAAATAAGTGTT
GAGGAGCCAATCGAAAGGAGGCCACCTCTTTACGCACACGTTACATTTTACTCGCAGATG
ACACTCTTCCATGTCCTAGATGGGAATCGGAGAGTCAAGTTCATGATCAGGGGAAAACAT
CTATGGGCTCGACAGTATGTGCCAAAGAAGAAGAAGAAAACTGATGTCTTTATGACCAAA
GCCTGATTTCATAAACATTCAAGAAAACGATATGCCAAGCATTCTGGAAGCATACTCGAA
TAGAATCTGCACTTGTAAGATTATTCTTGTGCATATCTAATTCTCGTGCTTTCTCCAACT
TATTACACATTTGTGACCCAGATTTATGGACATTGTTCTGAACTTATAATGAATTACATT
CTGAGGACTCAAATTTGTTTGTTAAGGATTATAAATTTGTATTATTGGTACGTATAATGG
TGTTAAAATTTTAAATTTGTTCCTCGAATGCTATTTTAGTGTATGGTAAGTGGCCTCAAA
ATTTCATGGGTAGCTATCTATAGCTTTGAGTAAGTGAAAAGTAAAAAAAGTTAAACGTAC
ATACCAATAAAGGTTGCATTGTTTGAAATGCCCTTCCTCTAAATAAGTATAAGTTCATAA
TGCACATAGCTAGAGAAAAAACTTTTGGACTGGTAGAGCAAATATTACCTATTAACACTA
TTTTAAAAACATGGGACTGAATGTCACGGAAATTTGTAGCTTAATATCATTTCTGGGCAG
TACTGTGTGTGGCGTGCCGGCACGAACACTCGCACCGGTTGCAGCGCGGCCGTTAGATCT
ACGGGCCGCACCGTTAGATCTATCCATGCAGCAAAAAATTTCGATGCAGCATATTTCGGT
TATGATGCAGCAACTTTTGTTCACGGTTGCAACAAAAATGTGGTTGTAGCCAAAATACAT
CAATGTGGTCATAGCAAAAAAACGACGTTGATAGATGCGTGGTACCAAAACAAAATGTGG
GTTGTAGCAAAAACAATCCGATGAACTCGGGTTGTAACTGTGACGAACGTGTATGCAACT
TTTTAGTGAATAGTTGCTGCAAAAAATGATACCGATTGTAGCAAAATTAACACAATTGTA
GCAAAAATCAAACGTCGGTTGTAGCAAAAAAGTCCAACGAACTCAAGTTGCAATCAAACG
TGGAATCAACTTTTTTAATGGACAAATTGTAGCAAAATGAGAAAGCAAATTTGAACATGG
TTGCAACAAATCTGAATGAAAAAATATTGCATGCCTTGACCAACGAAGCGCGCGGGCCAT
GCGTGACCGGCCGAACGATTGGGCCGGTGCGCCGGATGGAAGCGTTTCCCTTTACTTATA
CATCATACTTTGTTGTCTAACTATATAACATAATGGAAATATCCTAGTTGATCCCTTTGA
TGTTCTTAGCGTATTTAATTTTACATGTTCTAACTTCATAAATTAACTATGAATTTATAT
GGTTAAATTCAGCAATCATGTTCCGTCCTCCCTATACTTGAAAAACTAAGGTTTCAAGGT
ACAACTCATAGTTGTTGATATGTTAATAGTATATGTACAGATTGTTCATAAATTCTTATT
CATGAAAAACATATGTGCATGCATGATGACTGTTGTCGAAATTTATCTTCAAAAGAAAGA
TGTCAATGATTTGTATATGTGCACGCGCCTGACGATCCCCTTCTTGCAGCGACTTAGGAT
ATTTTATGCTACCTCATGCATAAGTGTATTTGACGATCCACTTCAAAAGAAATTACATAT
TAACATGTATATATGCATACCGAAGTTCAATGCTTTAGGTATTTTATATGCTACATTTGT
GGGCACAGACCCGACCTTGAGGACGCAGTAGTAGATACTTTCCGACGACGATACGTACAC
TCAAGCTAGCGCGGTCAATTCCTTCTGGTAATCGAGAGTATACGGTGACACACGCACGTA
CACCACAAGCACCTTGATTGATTCACCTAGAGTCACTTAAGTAGCAACGGACCAAGCAGC
TGGATCGATTCCTTCGAGCCCTAGCTTGCACTATCCCACGATACGTACGTATACGCTAGG
TGCCGATAGCGATTGACGAATTCGATCTCGCCGTTGCCGAGACACAAGCACACGGGACAC
CAGATTGGATTGCCACGGGAGAATGTCGCTCCCGTTATTTTTCTTGTATTGATCGCACGG
CTCAGCAAAGTTGTGGTTTGGCAGAGGGTTAACATCAAAGTGCATAACATGTTCGGTCCT
CTTCGGCCGACGGTGGCGGCGGCTACGGCGTCATTTCTTTCATGCAGGCTCCACCATGGT
GTCCTTGGCTCTTCACACTGCACCTGGTGAAAACCTAATCCTCGGGAGCTGGCGGCGACT
ATCAATGTCGTGCCCTTCTTAAAAGCATCGTTTTGGAGGCCATGCTTCGTCACTGTCCCG
CTTCAATTCTCGGTGGCTAGGTCTCGGGAGGTCCTCGTCGGCCTTAAATAGTTTCTTTTG
TCCCATCTGTAGTGTGTTTGATGGTTGATTGGGTACTGTTGCGGTGCATCGACATCCTTG
TATCTTACCTTGAGTGTGTGTTGTGTGGGGTGGTGGGGCGTTGTATCCAGTTGTATCTCG
ATATATACTAACTAACCTACGACACCTAGCAATCGTACTCGACAATGTCTTCTAAGCCAA
CACGGACTGGTGCATAACATACACGGAACCGTACACGGTTACATCTAGTCGTGTTTAACT
CCAACATACATTTTCTAACAAATGCAGTGGCGTATAATGAACCTTGATGTACTGCATAAT
TACTGCTGCATTTTCTAACAAATGCCAATGAAATATATATATATATATATATATACTCTC
TCTCCTTTTTGAATTTTGAGTAATACTAGGCACATTTCTTTTATTTATCTGCTCCCTCTC
TGCATTTCCATCTTGAGGGATATGGGATACCTGTTTGTGTTGGAAATATGCCCTAGTCGC
AATAATAAATTCGTTATTATTATATTTCTTTATTCATNNNNNNNNTTTATTATCCATGTT
GGAATTGTATTGATTGTAAACTCAAA