Contig Data
morexGenes
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Map Locations of contig_63860 (3743 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012




Predicted Genes from contig_63860

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_73535 1 694 bp MLOC_73535.1 Available Available LOC_Os01g52960.1, FRAME:+1, EVALUE:7e-42, 13101.m05548 protein subtilisin N-terminal Region family protein, expressed





CDS Structure of MLOC_73535






Contig Sequence (3743 bp)

>contig_63860 3743 assembly3_WGSMorex_rbca.fasta
GCTAAAAAAGTAGCACATTCTTGTTTTGGCGCAGCTTTTGATTCCTTTTTAATCCTTATT
TTTTTGATTCGTTTTAATCTACCACAATTTTCAGCATTTTGCAACATAGCCGAAAAGCTC
TGAAACTTGAAAGAGAAGATGTGCGTGTTATATGAGGCCTAACCTATTGCCATGATAATA
ACTTTGAAAAGAGATGCTAAGCCTTGTACAATGCAAGGTGCTTAGGGGAGGTGCTTAGGG
AAATAAATCAGTCTTTCCTTAAGTACCGATGCTTATTTTTACAGGGTAGACGTTTAGTTA
GGCGTCTCTCATAGGCATCGATGTTTTAGAAAACTGCTGGTTTATTTTGCTAAGCACCTC
CCTAAGCACTTAGTGTTGTACAATGCCATGCACCCAAAAGATACCTCTCCGACGTAATCA
ACCTGATTTAGAATTGCGTCCATAACTCCCTGAAGTAAGTTAAGTTTCAACTCTTGCATT
AACGAGCTCTAAACGCTCGAAGTAAAACTGAGATTTGTAACCGGCTACCACCCGTGGCCA
TATATAAGCAACTGAAGCTTTACACATTCCCTGAACAAGATTGCTACAGCTGCAAGGCAG
ACCACTTCTCTTCAGTCTCTGGACGCAGCGATGGAGACCGCTCCCTCCACTTTGGTGTCC
CTTCTCCTCCTCCTCTTCCTCCTCTCCTCACCGGCCGCCGTGCCCACCGCCATGGCCCGG
CCAAGCGTCGACGGGCTCACCCCCGACGCCCTCCTCTGCTCACCCGCCGCCGCGCCCTCC
GCCTTGGCCCCTGGCGCCGACGAGCACGCATCCGACCGCGACGTGTACATAGTCTTCGTC
AGCCGCGCCGATTACACCGACTCCGTGGACTACGACGTCCGGCTGCTCGCCTCCGTCGTC
GGAAGGTTGGTTGCGAGTTGTGCGGCAAGCAAACATTTCCGCGTCCGTCCACGGTGCACA
ACGCACGGGAACAGCGCCGCCCGTCCTTCTCTTACGATGATCGTCGATGACAGTTCTGTT
GTTTCTACAGCTCGGAGGAAGCCAAGAAGGCCATGATCTACCACTACAGCGGTCTCGGGT
TCGCGGCGAGGCTCAAATCTACTGAAGCCGACCAGTTATCAAGTGAGCGCGGCTGATCAT
CCACCGAGTTTACATGCATTCAGAACGATGTTGTCAGTTTTTTTTTTTTTTTGGATCATG
GCTCAGCTTTTTTGCTTGACTTGTGCAGGGAAGGAGGGCATTGCAACCTTCAAGGACGAG
ACGTACTACGTGGAGAAAGACGGCCGCTTGCCTCGATTCTTTGAAGAGAATGTCTGAAGA
TCAAATGTTTACCCAACTACTATCACTACGTACGACCTGAAACATGTCACTATGAAAGAA
CAAACGCTTGCAAGTTCATACCATATAGTGCTAGAAAAATAACGAGTGAAGCTCCGGGTG
AGATGAATGACGATTCAGAAAGTTTTACTTCATGTCTAAGCTGATAATATCTGAGGGCCT
CGTATACAAGTTCATGCAGATTTTCTGTAGCCCAGATGGTCCAATTTGTTTGAGTCAGTC
AATTTTCAGCAACTTCTTTATGATTCATGCTAACTCGAGCCTAGAGCGAGTGAGAGGCGG
TGATGACAGACGGTGGGTTGAGGTTGAATAAACCGACAAGCCAAATTGACCGCGGGCTTG
AAAATTATCAGGCAACTACACTATAGGCAATCCTAAATTTTCAGGAAGCCAACTTCCTAT
GCTTCAGCTACATTTGACAACTAGAAACACAGTCTCTTATCTCAAATTCTCAATTTTCAC
AATAAAAGTCGCTATAAGAAAACCACAATAAAGAATATAGCTTAAGTGTGCCAACTCTAT
GCACACGACAGACTCCATATTAAAGGTTATACATGTCACGATAATAACCCCTCTGGTACG
ACTCGTCATGGCAGATATCATGATGGTTGACCACGAGCTGACTCTTGAAGAAGAGGAAAC
GAGCATCTCTGGCGGCCCGGCTGTCGAGGCACAAGAGCTCCTGCTGCTTCCTCACCCATT
GTTCAGGAGGAGCCCTGCCATAAACCTCTCTTGTAGTATCGTCCATGCAGTGGAACTCCA
TGGTCTTGAGGAACCTGCTCCTCCCGTGAAGGAACTTGGCCATGTCCCTCTGCCACTCCT
GCCCTCGGTAAACTTCGAACACCACCTTCTCGAGGTGGTTGTCGATGCAAGGAACGGATG
CCAGGACGTCCCATGATCCCGGGGAGCCGTCACGAGCCTCAGACCAAGAGTCCGACTGTT
ACAAAAATTTCAATCAGGATACACCAATGCCAATTTGGGCAAACATGCGTGGTCTATCAA
TGCAAGGGACAACTTGGAGTAGATATCTGATATAAACAGTTGAGCGAGCAGACAGAATAA
TTCACCTTGATGTAGATCGTCTCCAAGCAAGGGAACACCTTGAGCAGCTGCATAAACCAG
TTGATGTAATGTTTGTTGACATGCCCCTCCGGTGTGTGCCTCAGCTCGCTATTGTCTTGA
GGCTTGGCATAATGGTTTCAGCGTGAATATTCATTTTCTGGATTTGCATCAATTTGAAAT
TTTGAATGGTCAATAAGTATTACTCCCTCCGTTCCTAAANNNAAGTCTTTTTAGATGTTT
CATTAAGGGACTACATACGGATGTATATAGACATATTTTAAAATATAAATTCGTTGATTT
GCTCCGTATGTAATCTTCTAGTGAAATCTCTAGAAAAACTTATAGAGTAATATTTAGGAA
CAAAGGGCCTAGATGAACACGATTGCAAGGTCAATTCCTGGTTGCTTCATTTGTAGGCTT
ACCCTGAAATTGGTGAACTTGGTGTTTCCAAATTCAATCTCGTTGTTCATGCCGAGGTAG
CCTAAGAACTCCAGCTTCGGCGCGTGGACGATCTTGATTTTGGTCGCTCTCATGTCCATG
TAGCCGCCGAGCACCCAAACCAGGTTGGGAGCGTCGTCGATGAAGAGCTCCTTGAAGTCG
CCGCTGCTGCTCAGGACCTTGAGGCTCCGAGACCGGACATGGAGGCAGTCGCACTTGCTG
ATGGACTGGATCCTCAGGTGCTCCAGCGACGTGCAGTGCGAGAGCAGGGAGTTGAGCGAG
TCCTCGGAGATCTTGACGTCGGACAGGTCCATCTCGGTGAGGGCGGCGAGGGATGCGGCG
GCGGCCTCGGTGACGTCAGGGAAGGTGCCGTTAATCACGTGGAGGCGCTTCAGGGATGCG
CAGGCGAATAGGGATTCCGGAACCATCTGCCTCCGCCTCTCGCTGAAGTGGAGGTTGAGT
TCTTCGATGCCGCGGTTCGCCAGATCCCGGAGCCAGCCGTCGACGGCGCCCTCGTCCTCG
TGGCGGAAGGAGAGCCTGCACGTGCTGAATGAGCGCACGGGCTCGGTGGGGTGGGCGGCG
AGGATGGAGGTGATGGCCTCGACGGCCTTGTCGGGGCGAATACTGCCGGCCTTGAAATCG
AGGAGGGTGGATGGGAAGAGGCGGCGCCAGCGGGAGCCGAGGATTGAAGACCTCGCCGCT
TCTTCCATGCCGAGGCGGGAGAGGATGGTCACAAGGATGATGTCTGGGAGGTCGCTGAGG
CGGTCGTCCCCGACGGCGGCCGCCATCTCCGGTGAATTTGTGCGATCCTAGGTATTGCTG
CGGCGGCGCGGTGGTAGATCGGTTAGGGAATTTGGGTTTTTTGTCGAGGGTAATCTCTCC
CTCCTTTTATATATATATATATA