Contig Data
morexGenes
Links



Map Locations of contig_6386 (6188 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_6386

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_73534 5 3697 bp AK376811 Available Available None





CDS Structure of MLOC_73534






Contig Sequence (6188 bp)

>contig_6386 6188 assembly3_WGSMorex_rbca.fasta
GGATCATATTCAGAGCCGGCGGCGGGCGACAGGCAGGGCAACGAGCCTTCTGTGTTCCAA
TTAGCTTAGTGCGAACTCTAATGAATTCCTCTCGCCATCGCCAAAATAGGTAAGTCAACA
AAACTTGTTCCTCTCACCAAGCTAACCACGTGAGATCATGTGTAGGATCGAGCGTGAACA
GTTCTCCGTCTAGATTTGATACCGGTAGGAGTTAAACAATTCATCAATATTTGCATGGTC
CAGGCCGGGGATTGGATGATTTGCCCCACTTTACAAGGGGTTGGATAATTTGTCCCAATG
TTGTCTCAATGACCAGTGGCCCCGGCCTCATCCGGCAGTCTGGGTGAGGGGGAGCAAATG
ATCAAATTGGAAAGTAAAATGGGGCAAAAGATCTAATTTCTCGGTCCAGACACTAATTTA
AGTGTTTAACTACCATGTTCGTCTGTTTAACTTTGGCTCTTACAGTCCTACTCCTAATCT
CTAAATTTGAATTAACTTTTGGCAAGGATCATCACCTCGTTAGAGACTTGGTTCTTGCCT
ATTTGTTTAAAGAATACAGTATATCAATTCATCTGGACACGACCCAAGACTAGATCGATT
AGACGGTTCGTGTAATTCTCAAACTTTGACGTATAATCTTCAACGGATATCTGCTGAGTA
CTGCCATATCACTTTATTTTATTCATCTTTTGTAGTGTTTCAGTAATACAGATTTGAGTC
ATAATGAAGAGAAGATTTATTATGAGGACATTGAAGATTTTATTTCAAAGAATACTAAAA
GAATGATGATGTTTAAGTAAATATTGTGCAATGGGAGTTGAAGAGGTATGCTTTTTTATG
TATCCAATTGTTATGTAAAATATGATATCATATACTCCCTCTGATCCTAAATACTATAAG
TCTTTTTAGAGATTTCAATAAGAACTTCATATGGATGTATATAGACACATTTTAGACTAT
AGATTCACTTATTTCGTTTCATATATAGTCTACATTTAAATCTTTAAAAATACTTATATT
TAAAAATATAGGAAGTACATTATAATTGTTCATTAGTTTATTTTTTTCTAGTAAGATAAG
GGCCCGTTTTTTAGTTTTGCACAGGGTCCCGGATTTTGCCGGCCCGGCCCTGATAATGTT
AGAGGGGCCCAAATCACCTAAACGTAGTTAATTTTGATTGACAAATGAAGGATTAGGAGT
ACATATAAGGTGTATTTGTGAGAGCAAGGGGGGCGAGGCCCCTGCCAGCACCCCTGCCTC
TGCTACTGGATGCAAGGATTAAAAGTTACAATGATTTTAGTATAAGATAGTGTAGCTTCT
TTTACCTAGACGCCACACAACCAAAGATTACATGTATATCAGGCGCTACACGGTGGAGTG
TGACGTCTTGCTATCGGACATCATACAAAAAGATTAGACGTGTGGATTTTATTTAGCACA
GTTTAACTTGTGAATTAGTTGCGTTTATATGTCAATTGTGTACATTTTGCCTCACCATAA
GGCTGTCGACGCTGTTGCCGTCTGAGTAAAAACGAAGGCAGAAACTGCGACCTTGAATCC
ACCTTCTACGAACGCCAAGCTAGGAAATCTGACAGATGACAAATAGGAGGAAAGATCAAC
TGAAAGAATTAATCACACACTAAGATAAAAGCATGCCAAATTACAGGACAACAACACAAA
CACCGCTCTGAACACCAGCAGAGCCCATCAGATACTCATTCAGGATCAGTAGCCTCACTA
CTCCGAAAACGGCACAGCAGAATTTCTCAAAACAAAAAGAATAAATCAGAGATCAACAGA
AACCTCACCCCACTAATCAACCAAGCAAGCGGCTATCAACTTTCGCTCAAAGCTATCTAT
ATAACCAACCAAGTAACTATGCAGCAACCTAGCTTAGCTAGCTAGCTACCTCTGCTAAAC
ACAACGGGACTCCTTCATCTCCGCGACCCGCCCTCACGGCGCCTGGGCTGCGGCCTCCTC
CGGCGGCGTCGCTGGCCCGGAGTCCGAGTTTCGGATCTCGGCGATTCGCCTGATCACCTC
GTCCATCCTCGGCCGCTGGTCCGGCGCGACGGCCACGCACGCCATGGCCACCTGGAGCAG
CTGCACCATCTCGTCCTCGATGTTGGGGTGCCGGAGCAGGTCCACGTCGAACACCTCCGC
GGTCCACTCCTCCCGGACAACGGACTGCACCCACCGCGGCAGGTGCTCGATGGAATCCTC
ACGCCCGGGGGACCTCAGGGGTGCCTTTCCAGTCAGCATTTCCAGGAGCAGGACGCCAAA
GCTGTAGACGTCCGACTTCTGGGTCGGCTTCTTGGTCTCCAGGACCTCCGGCGCTCGGTA
TCCGATGAGCCGGGCGGGGGCGGGCAGGGTGGTCATGAGCTGCGCCAGGCCGAACTCGGA
GACGCAGCCGTCGAGGTTCTGCGACAGAAGGATGTTCGACGACTTCAGGTTGCCGTGGAT
GAACTTCCCGCTTCCCTCGGCGTGAAGATGGGCGAGCCCTCGCGCCACGCCGAGGGATAT
CTTCACTCTCGTCTCCCAGTCCAGTGCAGCTCTTCCAGTAGCTTTGTTCCCTGCAAGTCA
ACCGCAGCAAATGTCATTCATTTGAACAGTCAACAGACAACCATGGGCACGAAATCTTAT
CAACCAGTTGAGTTCAGTGCTACAGTGAAACACTAAATCCGACTGCAGTCTGCAATTGCT
TAATAACAATGTTAAAAGGCAAAATAAATTCACATATCTAGAAGGTTAATGGCTATCCGT
TTATTTGCAGAAATTGGAGGATTCATCTTAAGAGTGACCAGACCTATAATAGAAGTTTTA
GAGAACAGGAGAAAACACAAGGATTCGGCATATTAACTAGCACTATTCCGATTCGCTATG
TGACTTTCGAAGTGAATCTACAGTATGAATTCTAACCAAGTTTCGGATATGCTTGTAGCC
TGCTAGTGTCAACTGTTGAGTCTGAGACTCTGAGTTATCAATCCTCACTTCAATGGGGAG
AAACATTTTGAATAGGCTAGACCGCTAGAAGTTCATAAGCACTAATAGGCAACTGATTTC
AAACATAACAGGCAAAACAAAGAACTTACCATGCAAAACAGCAGCAAGGCTACCAGCAGG
GACATAGTCATACACCAGTAGCTTTTCATCTTTGGAGTAATAATAAGCACGCAACGGAAC
AATATTCTGATGCTGGCCAATCCTGCCAACTATCTCCATCTGCTGTTCGAAGTCTTTCTT
CCCCACCACCATCTCCTTTAATCTCTTGACCACAACTGTGGTGCTGTCCTCAAGAACAGC
CTTGTAGGTAGTTCCAAAGCTTCCTTTTCCAAGTACTTCAGCTGAAGCTCTAAGCAAATC
TTCCAGGTCAAAGTTATATGAAGAACCCTCGAAGAAAACCAGTTTGTTTCTCTCTGCTTC
CTGAACACTACTGCTGTAGTCTTCCTTAGGGGTGTCTGTCCTTCCACCTGCAACAGCTTT
TCCTTTGGATGACGAAGCTGTGGTTGGTTCTGTGTGTTTCTTTCTCTTGAAAATACATAT
CAAGAGTACAAGAATCAAGAGAAGCAACAATACCCCTCCTGCAGCAGCAATTGCAATTAG
AACACCTGTCCTGATCCTTTTCCAGAAGCTCTTCTTGGGTTTGCTGGGCACTGATGGTGT
CGGTGAAGGAGAAGGCGCAGTTCCAGGACATGGTTCCAATGGTAACCCACACAGAAAAGC
ATTCCCTAAGAATGAACTAGCTGGGAATTTCTGCAAGGAAGGTGGTATTGGACCACTGAG
GTTGTTGTTGCTCATATTCAAATGCCTCAATTTGGGGAGACGTAGGTCAGGGATGGGTCC
AGAAAGAGAGTTGTTCTGGAGAAGGATTGCAGTAAGTCCAGTGAGATTTTGTACTCTCAA
TGGGATTTCCCCATCAAAAGTGTTGTAGGACAGATCTAGGAATGTTAAGCTGGATGAAAG
TGTAGTTGGTATGATTCCAGACAGATTATTATGCTGCAGGTAGAGGGAATGAAGGGATGG
AATAGATCCTACATCAGGAGGGAGGTCAACAGTAAGGCGATTAGACCGTAGGCTCAACAC
CTCCAAGGCATCAAGCTTGCCAAGTGTATCCGAGGGTATCGGGCCAAAGAGTCCTACTGC
AGGTAGGCGTAGTGTGTGTACACGGCTATTGTCCGGTGTGCATGTCACTCCCACCCAAGA
AGTGCAGACAGGTGTCGTGGAGCTCCAGTTGAGCTTCCTGCCATGGGGCAGGGATGCAGC
AAATGCAAGAAGAGCCTGCTTGTCAGAGTTCAGATCGGCACTTTCAGCATACAGGATGCA
TGCAAAGAGAACAGCAGCAGACAGAGATGCTGCAAGTGTAAGATGCTGCATTGTTCGGAC
TTGCTGGAAGCCAATAGATTTCAACTCTGTAGTCCAAGCTTTCTCATCAGCTCTTCACTC
TTCTAGAATGAGAGAAAAAGAAAGGGTAAGTGAAAGTGGCCGACAAAACATCGAGGCAAT
AATAGATAGTACATGTAAAAAGGAAGGTCCCAAAAAAGCGGTGAACGAAGGAATTCAGAA
TATAAAACATGAAGCATAAACTTTGCACCTAAATACACTTTTGGCACTAACTGCCTAAGA
ACTAGAAAATATGCTCAAGAGATATGCAAAGTTAGAAATATGGGAGAGTTAATGGTGGAT
TTTCCCCCCTACTCTATCCTAAAGGGTTGTAGAGAATAATCTACCGTGGTAGCTTGTTTT
CAGAAGAACTTGCAGTTGAATAAGTGAGATACTTAAACGTTCTCTTCGACCCACATACTG
GCATCTGCATGTTCATGGCTTTAAAATCAATATCCCATTTTAGATCATCCAAAGACAGGT
TCATCGGCAAGATAACAAATACGGAGTAGTATACATATACAGGGCTTTGACAGACCAAAC
TTGCATACCGGCTCTGTATTTGGTCAAATAAGCAATTGTATACCTCGTCCAACACAATAA
TGTTCTTGAGAGTTAAGAGCTCTCCCGTTTGTACCTACCTTAGCTATCATTAGGCTCAAC
CAGAAATTGCTCACTTTGCAGTGCAACTGGAATTGCAACGATCAGAACAGAAGCTGGTGC
AACCGCATACGTAAGTAATAGAATAAGCCAGTAGAATGATCCAGGAGAGAAATGCTTCCA
TGGTGAGGCATTCTATGCAAGACACCTCACATTTGCCAACTACTACTACATAGTAAGCTC
CCCTCTCATCGGCTCCATTTGTCTCTTCCTCTAGTCTCAGACTCTCAGCCATAAGACCCA
CCATCAAGCTGATTGCTCTGGTGGTTCTTATTGGTTTTCAACGGGGGGCAGTTGAGATAA
TGTGCATGTGACAACAGCATACAGCCCGTCTCATATCACTCATTGGCCTCCTTTTTATAA
AGCAGAACCCAAATTGCGCACATTAGCTTAGGACTAGCAAACCATCATTTAAAAAATGGT
GGACAAATGATGGCAAGAACTTGTTCAACGAGGCTCCCAGAGGAAAATTTGCTAGATTCC
CTTTATGTGGAGGTAGGTGATCCACTTAAATGTACCACACCACACCACCGCAGTAGTACC
AGCGTGCTCACCTAACCTTACATTACATGATCCACACCTGAATTCATGTTACCGTTGTGT
TCTCAATTACTACTAGATGGTTAATACTAGAAGTGACAGCACAGGGCCACAGGCACTAAA
AGGCAGGGCCTAGAGCTGGAGGTAAAGGTCTCCGATGGATGAGAGAAAGCGAGAAACGGA
AGGAGAGGAAGGAAAGTAGGGTCTTTTAATCTTTTTGGAGGGGAGGTGGGGGCTGGCCGG
CTGGCATAAATCAATGCAAGTGTTCATGGCTGCATCTGCATGGGCTACTACGCCGCTGGC
ACGGCCTACACGCATCCATACACCTGACTGTGGACCGGGTGGCGCCATGATGGTCGATAA
TTCTGTAGACAGAATTACAACAGCAGAGACTTATCAGTGTGTTGAAAAGAATTACCAACT
CATCTAGTAGGAAAGGAATGTGATACAAGAACTAGTGCTACCCAGCTCTTGGCATTAAAA
CATTCTTCTCCGTATTTGGAAACAAATAAAAGCTTAACACTAGCCATCAGGCGCAAAACA
AACAACGGCCAACAAACTGCATTGCGCTAATCGATTCCGTTCCTAAACCCCGGGGGGGGG
GGGGGGGG