morexGenes - Barley RNA-seq Database

Contig contig_63832
Source Contig contig_63832
Contig Data
|Contig Location|
|Microarray Probes|
|Predicted Genes|
|CDS Structure|
|DNA Sequence|
morexGenes
Links
Map Locations of contig_63832 (10037 bp)

Morex x Barke POPSEQ 2013	Oregon Wolfe POPSEQ 2013	Morex Genome Release 2012
		No map location
Predicted Genes from contig_63832

Gene ID	# CDS Predicted	Max CDS Length	Probes in Cluster	FPKM by Treatment	FPKM by Replicate	Top Rice Hit
MLOC_73511	1	496 bp	None	Available	Available	None
MLOC_73512	8	1259 bp	MLOC_73512.7	Available	Available	LOC_Os02g42540.1, FRAME:-1, EVALUE:3e-92, 13102.m04719 protein expressed protein
CDS Structure of MLOC_73511

CDS Structure of MLOC_73512

Contig Sequence (10037 bp)

>contig_63832 10037 assembly3_WGSMorex_rbca.fasta
GCACGGACTGGACAGTTTCTCTGAAACAACTGCCCAGTTTCAGAAACTGTGCCCCAGTTT
CAGAAATCGATTGATGCGCGGGACGAGGAAGTGGTGGACAGTTTATTTGAATCCACCAGT
GGAAGGTAAGAGTTTCCCGTAGCATAATACAGTATTGGACGTAGAAGCACTGGGTTTAGT
GGATCCAAAATGTTCCTGGCCATTCAAGTAGATAACGACTTTATAAAGCCTCTACAACCT
GATACCATTTGCTATGATGAATATACACTCCATCCGTTTCTAAATATAAAACCTTTTAAA
TATTGCACTATGAACTACATACAGATGTACATAGACATATTTTAGAGTGTAGATTTACTC
ATTTTGTTTCGTATGTAGTCTCTTAGTAAAATTTTTAAAAGGTTTTATATTTAAGAACGA
AGGAAATATTTTTCTTATAAACAATAAAGGAGCTTAGTGAATATAACTTTTCTATTTATT
TAGCAAAATTGATGTCTTGGTTGTCCCCCCTGTTTTGTTTTTCGATAACAGGACAAACAT
ATCTGCTGAGAGGGTATCCAAGAGCTGATGAGGACATGAGGTGGTCAAGCTTCTCGTTTT
TTTCAATTCTGATTTGGCCGAGTCCAAACTAGTCATTGCTGCCTCCAAATATATTAGATG
ATGATCCAATGCATGCCTAACAATTAGTATTTGCCAAGTATCCTTTTTTTTTTACATGAA
AAATGTCTAGTCGTGTATACGATGAAGAGGATCCTGAGTTTTGAGGTTTTCTGCAATCTA
TTCTTCATCTAACTTGTTGCACAAGAGGGATGGGCTTCCATTCATATTCAGACGACAGAG
AACTGCATGGAGCGACGAACTGAAGCAGAGTCATGTACTCCATCTGTTCCTAAATATAAG
CCCTTTTCGAGATTTTCATATGGACTACTCCCTCCGTTCCTAAANATAAGTCTTTTTAGA
TGTTTTACTAGTGGACTACATACGAATGTATAGACATATTTTAGAGTATAGATTTAATCA
TTTTGCTTCGTATGTAGACCCCTAGTAAAATCGCTTAAAANNNNNNNATTTAGGAACGGA
GGGAGTACATATGGAGCAAAATGAGTGAATCTACACTCTAAAGTACATTTATATACATCC
ATATATAGTTTGTATTGAAATCTCTAAAAGGGCTTCTATTTCGAAACGGAGGGAGTTGCT
TGCTTTGCTGAAGATTTCATTTACTTCTATACATTAGCAATCACATATATAGTTCTGCAA
GAATATATAGTCTACCCAATCATTAACTCAGGCTTGATTTCCAGTAGAGACACCTAATCA
GTGCCGTCATAGGTTCTTTATCCTTCTGACGATACAACACGCAGCAAGAGAAAAGAACAA
ACTTTGACACAAAGTCTACAACAATTTCTCCACGCCACCAGCTATTCCTCGTCCGAACTC
TCATACGCCAAACCAAGTAAGCTTACAGCTGCATTTTGCGACTGGGCCTTCGCTGGATCA
CCTGGTTTTGACAGAGGCTGCAGAAAGCTGACCGCCCCTTGAGACGGTCCCTTTTCACCT
TCAGATGATTCTGGTTGGTTCCCAGGGGTAGACATTTTCCTCACAGAATCTTCTTGTTCC
TGCTTAGGTCTATCACCCTCTGCTGTTTGTCGAGGGCTGCTGACTTTTGCTCGCTTTGGT
TTGATCTCGACAATCTTCTTCAAGAGATCACGTTGCCTGCCCATAATAAGGTGTGTGCCA
AATCAGAAGGCAAAAGTATTCTGTTCATGGAAACAGAGTCTTTGCTGCACAGAGCTTACC
TTATATCACTTTTGGGTCTAGGCTCGACGCGAAGAGCCGCAGGAATAGCAGGTGCAGAAT
CAGCTAGAACTGCTGCTTGGTAATGCCAGAGTTAAAGAAAACAAACAAACAAATTGACAG
AGTTGTCGAAATGTGGAACGCTGCAAGCTGCGATAAGATGCGAAACTACCCTAGGCATGT
GAATATTGTGCTGCAAGTGCATGACCAATGACAAGAAAATCAAATGATAGATATGTGGAA
AATAGCATGCAAGCATAGCAAGAACGCTTGGATTATACCAACGATTATCTTGTAAAATGT
GTGGGAGATGTTATAATGTATCATGCAAGAGAGGATATCTTAAAGGCAGCAAATGCCCGC
TTTTCTGTACGACGAAGGAGACGCTCTGCATCTTCCTCAGCCTCCATTTGCTCTTTAAGG
TAGAGCAAATCATCACTGTCCAATGCTGAACAACATCAAAGTAAACAAGGTTAACAAGGA
GCCAGCATGAATTCTTCATTAAAGAAGCATGAAGTACCTCCTCGCCCATGAAGGTAGCCT
CCCCGCTCACCAGCAACATCCTGCATCTGTTGGCATCAACCGCCCAGTAGAAAGCCAGAA
TCCCTGTCAGGGCATGTTATCAGAACATCGTAAATCAATGCCTATTGGAGGCACACTGAG
TAATGGGACCAATTTTTCAAGAATAGTGAGTAATCTCAATGGCCAAAAGCCCACAACCGC
CAGCAAGTTAAATACTGTTCCGAACACAACACCAATCGGAGCAGATAATGCATGCTACCT
AAACCTAACACAACCTTAATCTTTTTCCTGACCCATTGAACGATTTCTCACAATCCAAAG
TAAATTCCCTGAATTTAAGCTCATTGGTACAAACATATCAAGGCCTTCTGTACTTATCTA
CATCTGTACCAGTCCAAATATAGTGCATATTCCAAGCAGCAAGCACAATACCGTGTCAAA
ACTCAAAAACAGATCTCTTTTCTTTCCATGACCCTCATTCAAATATCAAAACTATCCAAT
ATTCAAATGTGATATTCGATAATGTAACTTAGATTTTGGAAGCTAAAGTAATTCCCTAAA
AATAAGATACCTACCAGGACAGTGCTACTAAGTAATGATAACTCAATTTATTCACAATTT
AATCAGAATTATTTTTGCAAGAGCATTCCGGTTAACCTTTGCTACCATGCGCTGGAAGGT
GACATCCTCATCATCGATCTTGTCCTTTCCCTTCCCATACTTTCTATCTGCATATGCATA
AGCCCAAAGGTGATGATTTAAGAAAATGTCCAATAAACCAAAAAGGAGAAGAATCACTTG
TCCACACTGGGACTGGAGAATGATGAAATCACTAACCTTTGGGGTCGCTGAGGTTAGTGT
ACTCACGAACCTCACGTCCAGACATGTCTGAGAGCTCGGCTGGCCCTATTTATATTCAGA
TCCAACATTAGGTACAATTTTTCAAACCGAGAAGGGTAAAAGTTTGAACAGAGTTTTTTT
TTGACAAAACCAATAATTAGTATAGGAAAAACAATAAAAAGAACCTTCAAAGAGAAATGG
TATGACTCAACTGGGTCTAACAATTGGTAATTTCAACCAAAAATGAATTGGTAGTTGAGC
TCTTACTGTCTCAAACTACCGTCCAAACACAAATTGTGTTAACTTGTCATGGCCGGCAAA
TTCTTATTTAGCGATCGTCTGACTTTGTTGTCCGAAAGTACTTTTTCTATAAGACAACTT
AACATCTCAGTACATGGTAATTGAATGTGCTATACTGTACAACATTTACAATCTGGACAT
GTGACAGATACTTCTAAAAACTATTTAAGATGGATCCAATATCCAATATTGGATCCATCT
CCTCCTATGACCATTCTATGAGCTCTTACAGTAAAGCACATTCAAAATGAGCATAGGAGA
TGGATCCAATATTCACTCCTGGTACAGTGGTTTCAGCTCATAAAAAGCAGAATAATTTGG
CAGGAGATAATATATGCAAGTGTTTGAGGATGTTTGTTGCAGCTGTGGGCAAGCCTGGGA
CATGTGATCAAGATGCAGTTTCAGGTGTGGCTGATATGACAATGCAAGGTGCAAACAGGA
CATAATTAGTGCTGCAGCAAAATCAGCATCAAGGTTGGTGAAGGAATCCCCAAACTGAAG
CAGTCATCCAGAGGCAGACTTGATGTGAGGCTTGGGGTTTGGGGGGTACGCCAAACTCGA
AATTCATCCGATAAGTAAGTAAATGGGCCGACAATTTGAGTAGTCCTATCCTAAAGAAAC
ACGATGCTCTGCCCTCTCGCTCATCAATTAGAGACAAAAAAAAGGGAGAAATAACTAGCA
GCTCAATCAGATCTGAGGCTTGCTCTTCCCTAGCTCTAGGTCATCAGTCTGTTAACTAAG
AATGTAATACTACTGCCGCCAATGTAGTCCAATCATTTTCTTCAGGCCTTTTTTGTTCCA
AATAACTTGCTTCTACTTGCTGGGTGCCACCCTGCCAACTCCCACTGATGCCAAGCAGGG
CACTCCAATTTAACCAATTGTGCATTAATACTTTGAATTTAGTAGTAATGCGAGAGCTTG
GAGTGGGCGGAGCCGATGCATACTCAACCCTAGCCGTTAAGGCAAACTGGCTCGGTAAAT
ATAATGAGAGGACGAAATAACAGAGTCAATACGGCAATATACGCAGTAACATGCTACTCT
TAACCCTAGGTTTGGCAGGGGCAGTGGAGGCGCGCGCATCCACCCGCCTGAGATGGTGGG
CAGCGGGGAGGGAGGGCGATGGCCGACGGAGAAACCGAGGAAGGCGAGGCCTACCCGATG
CAGTGCGTCGGAGAGAGGTGGGCGGTGCGGCGGCGGTGGAGTCCAACTTGCGGCGGACCG
GGGAGAGCGTGTCGCCGTGTCGCTATGGAGGCAGAGGGACGCCGCTGACCGCTTGGCACG
GAGAGAGAGGGAGGAGAGGAAAATAAACGTAGGGATCGTCCCGGAACGCTGATCGTTTCC
TCGGGCCGGCCCAGGCCCATCAGGCCTCGTTTGCCATTCGGGGATTCACGACTTTGAGAG
GAAAATCCCCGCGAGGGTCACAAACCTCATAGAACCTCATGCATCTATTTGATAAGAGGG
GTTTGCTTAGCCGAATCCCCTCTATTTCCCGTCAAACTCTTTCTATCCATGTGTTTCAGG
ACCCTCCTCGAGGGACTGGTGGAAACAAACCCCGAGGGATTTGAGAGGATTGGATGGAAG
GAAGGGATTCATCAAATCCCCTCCTCCCCAAACCTCCCCAATCCATTTCTACCAAACAAA
GCCTCAGCGGTCGGACATTCCTTCTTCGATCTGTTTTTCCCAAATTCACTAATCAGTATA
CTTCCCTGATGCAGATCTTCTCAAAGCTGAGCTTGTAAGCTGATCTTGATGGACGAGACA
TGTTTGAGGCAAGGGATCATCCGCAGAGTTGAAAACGAAAACACTATGGGCATTTGGAGA
CACAACTGGCTACCACGGACAGGGGATGATGAGGCCTATATCTTCACTAATTCTAACCCA
CCGTGCTTTGTGTCCGAGTTGATAAGTACATCGGAGGCAGCATGGAATGAACAGCTCATA
TGTCAGGTATTCTTGCCAATTGATGCTGAGTCGATTCTTTCCATTTCATTATGCATAAGA
AATATTGAAGACTTCTGGGTGTGGAACGGTGAGAAGCACAGAATGTTTTCGGTGAAGTTT
GCATAGAGAATAATCTTGCAAACAAAAATTACAAGGGGAGAACTGGATTGATGAGCGAGA
GGGTGCATCACGCAATGGCCAGCAAAGCAATGAATGGACACAAATGTGGGGTGTTGATGT
TCCTTCCAAGGTTAAACTGTTTCCGTGAAGGATTGTGCAAAGCTCTGTTCCCACCTTCGA
CCTGCTCCACCATAGGAACATGTTCACCTCGGATGCATGTTGGTTTTGCGGTGAAAGGGA
CTCCTGGAGGCGTGCCTTGATAAATTGTTCGATAGCGAGAAGTGTCTAGGCATTGGCAGA
TGAGGAGCTGGTTGAGCAGATGTGCCAACATGATATGGACAATGCAAGGGATTATATATT
TTTACTGATGAAACAACTACCTCATCACCTCTTCGTTCGTATGGTGATCACATTTTGGGC
TATATGGTTCGCGAGGCGAATGGCGATTTATGAAGACATCTTTCCAAGCTCTATGTTGAC
GCATCTTTTTTATCCTGTCTTACCGCAACGAGATAGAAATCATCAAGAAACCTAACACAT
CTCCAGCCAGTGTCGGCACCGCGAGGACTAGCGTCTGGATTCCGCCACCTTTTGGCACGG
TCAAGATTAATGTAGATGTGGCAGTGGTTGGGAGAAGGGGCGTCGGCTCGGTTGTTATCG
TCTGCAAGGACAGGGATGGAGCTTTTCTGGGGGGGCTCGACCATTGTCTTTTGTGGTATC
TCAGACCCGACTACATTGGAAGCTCTAGCAGTAAGAGAATCTATGGCGCTTATAGAGGAC
GTGAACTTACAATACATCTATATGGCGTCCGACTGCAAGGTGGTGGTTGAAGATATAAAG
AGAAAGAGCGGCACGGAATATGGTGCCATTATTCATGAGACTATACGTTCTTCTTCTAGT
TTTCCTAGCTGTAATTTCGTCTATGAGTTTAGGAGCTCAAATGTCAAGGCTCATAATTTA
GCGAAACATGCGTTGAAACTGGAGTGGGGTCGTCATGTTTGCTTAGGTCACCCCGGTAAT
CTTCCATTCGTCCATGTAAACACTATGACGACTTTATAAAGCTTCACGGATTGTCTAAAA
AACTAATTGAAGAGTACATCTTTCAAAGACCACTCTCATCTTCTCACTTTGTGACAAGTG
GTGCACTGCATACGTGCTACTTGTTGCAACCTAAGAGATTTCATTTTTTTTCGTACATTC
GTTTTTTAAACGTTTTATCTCCCCGTGCGTTCAAAACTCGAACCATTTTCACCATTGATT
TTCTAGCGCCGAGATCTTCGAAAATAAATCCCATATTAATAGGTTTTGACGAACTTTTTT
TCTAAAAAAAATCGGACAAAAAAACCGTATTCTCGCGATAGGATAAAACCAAAAACGCGT
TTTTTCTACATTTTTCCCTTTACGAAAGACATGGTCGTGCCACGAAGGCAAAACCATGAC
TCTTGTAAAAAAAATTCTTTCCGAGAGACACGGAAGTGCCTCTCATGATTTTTTTCTTTG
CGAGAGGCACACCTCCCATGGAAACAAAATATCGTGCCTCTTGCAAAAAAACAAAAACAC
ATTTTTTAATTTCCGAGAGGCACGGTCATGCTTCTCGCGGAAGCAAAATCATGCCTTTCA
CAAGAAAAACAAAAAACACGTTTTTTCGCGCCTTTTTTTTTAATTTTTTGTCAAAAAGCC
AAGAAAGACCGATGAAAAACGAAAACATAAAAAAAAGAAAAAAATCAATCTAAAAAGCCA
AAAACGTGTGGAAAAAATTAAAAAAACTAAAGAAAATGCTCAGAATGCTACACGAGGGGG
CGGCTGAGAACACTGAAAACAGGCTAAACTATGACGCGTGAATGTGCTTGTTGTGAGGCT
TCCGAAAGAACGCTCGCTAAGTAGTGGCTCCCTGTTTTTCCGGTTCGCCTCGTTGACTCG
GAGAAACTGAGGAAGGCGAGGCCTACCTGATACGATGCGTCGGAGAGAGGTGGGCGTTGC
GGCGACGGGGGAGTCCAACTCCCGACGGACCCGAAAGACGTGTCGCCGTGTCGCTCGGGA
GGCATAACCACACAGGGGAAACCCCTATTTGCCGCTCTGTGCGAAGCGGGATCGAGGCTT
CGCATAAAGCGCGAGGGGGATCGCGGTTTCGCATAGATCGGGATCGATTTTTTTCGGTTT
TGGAAAACTTCTAGAAGGTTCCTTGAGCCGGTTATTTATTTTTTATTCTTCTTTATTATT
TTCTGTTTCTATTTCATAAAATATTTTGGATTTTCAAAAAATATTCTTGATTTTTGAAAA
ATGTTATGTATTTTCTAAAAACAGTTCTCGGTTTCAAAATTTGTTCTTAAGATTCAAATT
TCTACTCAGTTTCAAAAAAAATCTTAAGATTCAAAAAAAATTTGTGTTGTAAAAAATAGT
TCGCACTTCCAAATTTGCTCAAAAAATTTCAAAATTGTTCTCATTTCCAAAATTTGTTCT
CAAAATTAAAAAAATGTTCGTACTTTAATTTTTTTTCGTGCTTTCAAATTTGTTTAGGAT
TTTAGAAATTTGTTTTCAGTTTCAAAATTTATTATCTAGATTCAAAAAATGTTCGCGCTT
CCAAATTTGTTCACGATTTTTCAAAATTGTTCTTGGTTTCAAAATTTATTCTGAAAATTG
GAAAAATGTTCGTGCTTTAAAAATTTCTTCGCGCTATCATTTTTTTTCAAAATTGTTCTC
CTTTTAAAATTTAATTCTAAAGATTCAAAAAATGTTTGTGCTTTTAAAAATTGTTCGTGC
TTTCAAATTTGAAAACATTTTTTCAAAATTGTTCTCGGTTTCATTTTTTATCCAAATTCA
AAAAATGTTCGTGTTTTAAAAATTGTTTGCTCTTTCAAATGTTTCGGGGTTTTAAAAAAA
AATTCTCCTTTTCAAAAGTTTGTTCTCAAGATTTAAAAAATGTTCGTGCTTCCAAATTTG
TTCCCTTTTTTAAAAATTGTCCTTGATTTCAAAATTTGTTCCCAAAATTTAAACAATGTT
CGTGCTTTAAAAATTTCTTCGCACTTTCAAAATTGTTCAAGGTTTTTGAAAATTGTTCTC
CTTTTCAAAAAAAATCCCAAGATTTAAATTTTTTTCGGGCTTCCAAATTTGTTCATGTTT
TTTTAAATTGTTCTGGATTTCAAAATTTCTTTTCAAAACTTAAAAACTGTTCGTTCTTTA
AATTTTTTGTTTGCACTTTCAAATTTGTTCGGAGGTTTTCAAAGTTTTGTTATTAAGATT
TAAAAAATGTTTGCGCTTCCAATTAGTTAAAAAAAATTATAAATCTTGGTTTCGATTTTT
TTTCTTAAAATTCAAAAAATATTTGTATTTTAAAATTTGTTCGTGGTTTTTCAAAATTGT
CTAGTTTTCAGAAATTTGTTCTCAAGATTTAAAAAATATCCGTGCTTTGAAATTTGTTCA
CATTTTAAAAAAATAGTTCTTGAAATTCGGAAAATGTTTTTTCAAATAAAAAAAGAAAAG
GAAAGAAAAACGAAGAAAAAAAGTAAAATAAACAAACAAGGAAAAAAGTAACAAAAAAAG
AAACTAAATTGGGACGGCCCAGTCAGGGTGCTCCCTGTGCGGCGCACGGGCTCCCGATAG
GAGGGGAGGTGCTATAGGACGCATTTTGTGTCAATTAGAAGGGGATTCGCATAGAAGTGC
TGACGGGCTGGTTTTAATGAGAGCAACTAATTAGCGAGCGTTTCCTCTGAAGGCTTCCAG
TGATCGCTTCCGTGCGCCGTCACTTGGTGCATTTTCAGCTGCCGTCATGTGTCGCTCACT
GAGCGTTTCCTTTGAATTTTATTTTTTTCACACGCGTTTTCGCCGTTTTTGAGTGGTTTT
TTATGATTTTTTTATGTTATAGTTTTTCACCGGTCTTTCGTAACTTTTGGACGAAAAAAA
TCATTTTTTTCTTCGAAAAAACGCGTTTTTGTACGTGAAAAAAATCGTTATTTGTTTTTT
TGCGAGAGGAACGGTTTCGCTTCAGCAAAAGGCGCGGTTTTGCATTCGCGAGAGCCATGG
CCGTGCCTCTCGGAAAGGGGAAAACGTGTTTTCATTTTTTTGCGAGAGGCACAGTTTTGC
TTTCATGAAAGGCACGGTTTTGCCTTCGCGAGAGGCACGGCCGTGCCTTTCGGAAAGGAA
AAAACGTGTTTTCTATTTTTTTTACGAGAGGCACGGTTTTGTTTTCACGAAAGGCACGAT
TTTGATTTCGCGAAAGACACGGTTTTACCTTCGCGAGAGGCACACCCGTGCCTGTCTCGA
AAAGGAAAAAAAAACATTTTCTGTTTTTTTTGTGAGAGGCACGGTTTTGCTTCCGTGAAA
GACACGATTTTGCCTATGCGAGAGGCACGCCCGTGCCTCTTCTGAAAAAGGAAAAAACAT
GTTTTTTGCTCTCTCTTTTTTCTCGTGAGGCATGGTTTTGCTTCCGCGAGAGGCACGGTT
TTGCCTTCGCTAGAGGCACGGTTTTGCTTCCGCGAGAGGCACGGTTTTGCCTTCGCCAGA
GGCACGGCCGTGCCTCT