morexGenes - Barley RNA-seq Database

Contig contig_63620
Source Contig contig_63620
Contig Data
|Contig Location|
|Microarray Probes|
|Predicted Genes|
|CDS Structure|
|DNA Sequence|
morexGenes
Links
Map Locations of contig_63620 (7663 bp)

Morex x Barke POPSEQ 2013	Oregon Wolfe POPSEQ 2013	Morex Genome Release 2012
	No map location	No map location
Predicted Genes from contig_63620

Gene ID	# CDS Predicted	Max CDS Length	Probes in Cluster	FPKM by Treatment	FPKM by Replicate	Top Rice Hit
MLOC_73427	3	2238 bp	MLOC_73427.2	Available	Available	LOC_Os01g02060.1, FRAME:+3, EVALUE:0.0, 13101.m00140 protein TOO MANY MOUTHS precursor, putative, expressed
CDS Structure of MLOC_73427

Contig Sequence (7663 bp)

>contig_63620 7663 assembly3_WGSMorex_rbca.fasta
GATTAAATCGAGGGCGTCACATGCACGTCCTGCTCCCCTCACAGGCGACGACGGTCGGCC
GGAGTACGTGGTGCTGAAGGGAACCCTGCAGCAACGAACGACCGACCGGAGGAGGTCTGG
GACGGCGGGCGACACCGGCTGTCGTATCTACCTCTCCCATCAGCGACCAAAGAGAACCCC
GGCCAAATGTTTTCTGGAAAGTCGGTGCAGAGGTAGCTATGGCATGTCGTGGTGCTTCGA
CGGCCTTTGTGGAAGACGACGCGGCCGGGGAAGGGTGGCGGCGGCAATGCCAGAGGGGCG
GAGGGAGGTAGAGAAAGAGGAGAGGGGGTATGTATCCCCGACGAGCGGGCCAGGCACGAT
AAGGATACACATCGCTAGCGTCCATGCGTCTTCGTTCGGCCGCAAACTCAGCCCAAACTT
GGATCTGGAATGGATAAAAAACAAAGACGATTCGTTTTCGGTCACGCGTTGGAAGATGTG
CCTTGTCCGTTGATCTGAAACAGACGTGGACGGATAAAATGGGATCCCGAGTAGGAGTCG
GCTTAAAAAGCCAAACAAAAGCCAAGCTACACATCCATCTGAACCGAGTAGAGTAGGAGC
ATGTACACTACTACACACACTGTGCAGACCATTAACCCGTTGGCCACAGCTTTCTCTGTC
TCTCTTGGTACCGTTGGCATCTTTCCACGAGAATTCAGATTCAGAAACCACCGTCCCATC
TCTCTTCCCTTCCTACTCCAAACCCCACAAGCACAACCCACACGCAACACACAGCGCACT
GTCCCCTACTCCCCTCTCCTCTCCTTTGTTGCTCGCTCGCCGCCTCGGGATCCCCCGGCG
CGGCGCAGCAGCTCCTTCCTTTGCGTAGGAATGTCTCGGGCGGCTGCCGCCTCCGTCTCT
GCGCAGCGAAAGCCACATTTATTTGCCACCTAAAAGGGGCACACCTCCCCACCCCAGCTT
AAATTCCCGGCCAGCCGCATCGAGAAAGAGAAACGAACGCAGAGGTCCGTCGCCAAGCCA
AGGTCCCAAACAATGGCGGCTATTTAGCGAGGCGCGCTGCAGGCAGGCCGGAAGGGGGAG
CAGAGCTTCTTGTTTGTTTTCTTGCGAAGAAGTACCGCTGCGATGAAGCGTGCACGCGGC
GGCAGGCTGCTGCTGGCCCTCGCCGTGCTCTTCTTGGCGCTGCACCTCCTGTTCTCCGGC
TGCGCGGCGGAAGGGGAGGACGAGGAGGGCTCGCCGTCACCGGCGGCGGCGGCGGAGCCG
GAGGCGCCGATGGAGGACAAGCAGAAGGCGGCCCTGTACGCCGCCATCGGGAGCTTCGTG
GGCAAGGCGTGGAACGGCTCCAGCCTCTTCCCCGACCCCTGCGGCCAGACTCCCATCCAG
GTTCGTTCGTGTTCGTCTCCCCCACAGCTAGCTCCTCTTCTTTATTGCTCTTGATTGATT
CCTGAAGAATGTCAAGTAGTACGAGCAATGGAGGATTCGAAAACACCAAAATTTGCCCTT
TTTTCATGGATTTAAACCAAATTTGATCTTGAGATTCACTGCAAATCGCTGCTCAGAAGG
ATGCCGTTTGTCTGCACACCCATCCAATTAAATTGCCTCATCTTGGGAATGCAAAGCGAG
ATGCTCCTCACAGGCGTTCCTCAAATTCACGGCACTGTATCCTCGCTTCAAGTTCCCCTG
TTCCTCTGTTTCCTAGTATTACCTTTTCACCTGCAGCAGCTCTCTCACTGTACTGTTTGC
TCCATTGTTCCCCGACTGTTGCTCCTCGGAGAATGCAAGATCTTACTGCTACTACTCCAC
TCCACTTCGCTGTTGGACGAGTGAGACGAAACCTTTGTTCCTCAACCGACCCACAACGGC
CACGCGATTCTTGCCAAATTCGGGACCTTTTTCTTACTCTCCCTCTCCCTCTCTCTTGCG
CGCAACAACTTTCTTTCCCCGGACATGATAAGAATCTGCGATTTGAAATGTCAATGCTTT
CTTAAACACATCCCATTTGGTCTCCCTTTTCCCATGTCCTCCTCCTCCTCTCTTTTTTGA
GGGCGTCCTCTTGCTCTTTTGCCTCGCCCAGAAAATCATTGCTACCAAGTACAGTAGTGA
TTTCTTTTTTACTTTCACCGATTTAACACTGGTTTACCTTGGTCAGATTAGCAATTTTCT
CTGGCAATAACACACATAGTTAGTTACTCTGGTTTATAATCTGCTTTACATCTGCTGCTT
GCAATAATTTTCACTCTCAGTGGTACTGCTAGAATCACATTCTGGTCCTGATGACAAGCC
AAGAAAATTGTGCCAGGACACCAGAACATGTGACTCTTTCCACCTCTGTTCCTAGTATTT
ACTATTTACCCCACCCAATTATGTTCTACTATTCATTTACAGGATTTCAGTACAAGTTTA
CTGACTGATGATGACGATGATGATACTCAATTCAGTGAAGTAATTGGTTCTTGGATCCCC
ATTTTTTTTCCTGCAGGGGGTGTCATGTGACCTCTTCAATGGCGTGTGGTACCCAACGGT
GGTCAGCATCGGTCCAGTGCTCGACAACTCGCTGCAGTGCGCCCCGGACGCCAGGTTCAG
CCCCCAGCTCTTCGACCTCCGGCGCCTCAAGAGCCTCACCTTCTACGCCTGCTTCCCGGC
GGCCAACCCCACGGCGATCCCGGCGACTAGCTGGGACAGGCTCGCCGGCACCCTCGAGAC
GCTCGAGTTCCGCTCCAACCCTGGCCTGGCCGGAGCTATCCCGGCTTCCATCGGTCGCCT
GGCCAGCTTGCAGTCCCTGGTCCTCGTCGACAACAACCTCACCGGTGCCGTGCCGCCGGA
GCTCGGTGGGCTGGCAAAGCTGCGGCGGCTCGTGCTGTCCGGCAACGGGCTGTCGGGCCC
GGTCCCGGCGACGCTCGGTAACAACAACCCTCAACTACGCGGCCTCGACGAGCTGCTGAT
CATGGACATGAGCAAGAACTCTCTAACCGGGTCTCTGCCTCCGTCGCTAGGTGGGCTCAA
GGGGCTGCTCAAGATGGACCTCAGCAACAACCGCCTCGAGGGGCGAATCCCGCCGGAGCT
CGCCGGGCTCGACAGCCTCACGCTGCTTGACCTCCGGAACAACAGCCTCACCGGCGGCCT
GCCGGAGTTCGTGCAGGGGATGCCGGCGCTGCAGGACCTGCTGCTCTCGACCAACCCGCT
GCTGGGAGGCACCCTGATGCAGCGCGGCTGGGAGAAGATGGCGAGCCTGGCCACGCTGGA
CCTGTCCAACGTCGGCCTCGCCGGCACCATCCCGGAGTCCATGGCGGCGATGCCCAGGCT
GCGGTTCCTGGCGCTGGACCACAACCGGCTCTCCGGCGCCGTGCCGGCCAAGCTCGCCGC
GCTGCCGAGCATCGGCGCCATGTACCTCAACGGCAACAACCTGACGGGGGCACTCGAGTT
CTCGGCCCGGTTCTACCAGAGGATGGGCAGCAGGTTCGCGTCCTGGGACAACCCCGGCCT
GTGCACGGCGGAGACGGCCGGCGGCGCGCCGACCGGCGTGGCGGTGTGCAAGGACGCGCA
GGATCCGCCTAGCGTCGGCGCGAGGGACGGGATGGATGGGGGTGGGAGGAAGCCCGAGGC
GGCGTCCTCCTCATCGGCTGGCATGGTCACCGTGCTCTGGTGGTCGGTGCTGGTTCAGTG
GATGATGATGCTGCTGTAGACACCAAGTTCAGATTTACTGATATGATAGGTAGAAAGATG
GTGTTTTGTTGTGTTCGGTTCTGTTGTGTCGATTGGTGAAGAAAGAACAGAAGAGAGGCT
GGAGGAGTCTAGTGGTTGGTTACTGACAGAGATGTTCATTTTGGGTGTAATTAGGCCTGT
TTCTGCTGTCAAGTTACAGGATGTCGATAAGATAAATTTCCTTAGAATTAATTCTGGTTC
ATCTTGTGTGGAGACTTTTGGTGTTCATGTCTGCTTGGTATTTTTGTTACCTGCGGACGC
CTTATTCGATCACATGGATTGTAAATACTATATGATGCCCCTTGTGTTGCTGCGAAAATC
TTGCTAAAACATACACATAAGTAGATGTTAGAAAAATAAAACTATTGTAAAAACAAATTT
AAAAATGCCATCGAGATATATTTTTAAAACAATAAAACATATAAAGCATGTGAAAAAATG
TTGTATAAATGGAGAAATTTATTAGACTGAAATTAAATGTGGGTTATTTTTAACAACAAT
GTGTATCATGACTTGCATATATTTGCATCAAACATACAACGTAGAAATACATCTAGGTCA
TGGTACAATATATTTGTCACATGACCGTCTATGCCCGCACAAAAATAAGTGACACAAATT
AATTGTATGATTTCTGAGACGGTGTGATTGTATGAATAAATTACTGCATAAATTATACTC
TCTCCGTCTCATAATATAAGTTTTTTTTATATTAATGATATTATAATAGTCTCAAAAAAG
TTTTTATATTATGAAACGGGAGAATAACTTATAATCACGTGCATGACTTTATGATGTGAC
ATGGTTGCAGAAGATGAAAAATAAACATTTTGTTGCAACTATTTAAGATTAGAGGATTTT
AGTGTATCTATTGTACACAAGTTAACACTTTTGACCCAGATAAGTCCCGAATGTTTGTAT
TTTGGCAATGGCAAATCATATGTTTTTATGCCAAATATAGTTGACACGAGGATAATAAGT
TTAGTTAGTAAGCATGGTAAAAATTTGTCTCATGTTTATTTTTCGTCGGGAAATTATCAT
GTTCGCCAGATAAACCTATCATCTTTGTGTGAACTAATGTTGTCATAAAAAATGTTCGAT
TTGTCATTGGCAAAATCCGAACGTTCGCGTTTTATCTTTTCCGGAACTACACTATTCAGA
GTTAGTGAAATGGAGTAGTTGCATCGGAAGGTTATAGGTGTACCTTCTTCATCGGATAAT
GCACATACTCCCCTAAAAAATGGATAATGCGCATACCAGCAAAATTTAGGCTTTTGCCAT
TTGCATACAAACACAAAGTTGAAAAAAACATAGCAGAGTACTCCCTTCATTTTTATATAC
AAGGCCACAATTCCACATTATAGATACCAAGGCAAAAGTTAATATCTTATAAGTTAATGT
TACAAGACAACTTGTCTTCTTGTTTACCCTGTAAATTAATATGTATTTTTCTTTCTCATA
CATATCAAGTCAATGGTCTCACTCCTGCATGCATGCAAGGGATAATTAATATCTTTCTTT
GCTACTTAGAAGGCGTGCATGCAAATTCTCTAGGACCTAGGTGGTTATTAATTGACTGTG
AAATGAGTTAAAAGGTAGCATTCACACTACGCATGCATATAGAAGTAATACAACGGACTA
CTAATTAGCTGCTAGGAGTAAATGCAACGTGTCTTAATCTTTGTCTATTTTGAAAACGCA
CGCAAATCTAAGTGTGCCTTCTAAACTGTGACGGAGGGAGTAGTACTATGAGGCAAACAC
CATTAATATTACATCGATTAGTGTTAGTGGCCTTGTATATATATGCAAATTCTAATTTTA
ATAATGACCTTGTATATATAGAAATAAAGGGAGTACCGAAAGAACAAGTTATCAGAGTAT
GGAAAAACGAATGGTAAAAGAAACCATCGTACGTAGGAGTACATAGCAGTAAAATTAGAA
GCCGGCTATAATGCCCACTCTTGTGCATTTGTGCATGCATGCCAGCGAGGGTTCACTCTC
TGTTTTCCCGGGCCCGCAGCATAAAGGACATCCACCTGCACCGCCCTGTTGATCCGCGAA
GCAAAGGAATCCTCGTAGGGCAGTTCCTATCATCGCTGCTGCTGATTGCGCGGGACCCAC
GGCTCAGAGATCTCAACGGCAATACTATTACCACTCGGATTACTCCCTTCGTTCCTAAAT
AAATGTAGTGTGTTAAAAGATTTTTCAATAAGGTATACATACGAAACAAAATAAGTGAAT
CTACACTTTAAAATATATCAATATACATTCGTACATGGCTCATTAGTGAAATCTATAAAA
AGACTTATATTTAAAAACAGAATGAGTATTTCTTATAACCACACAGAAAAACTGGATCTG
AGTGGTTATCTAAAAAAAAACTCGTATACATTTTATTTTAGATGAACGCAGATCCAGTTA
ACTTTTTCTAGGGACAGATCCAGTTAACCAGTCAGCAAAGCAGAGGGCCTTCGAAGGCTA
AGGTGCGTTCATTCCGACTGACTATGAAAACATCTACAACCCGGCCCATATATGTCCGAT
GGCTTGATCAGTGACGAATCATCTTTTTATCATAAAAATAAACCACTAAGTTGGTAATAA
ACACAGGGGCGAGTCTGTCGGCTGATCTTTCTACAAGATCGGCCAGGTCGTGAGCTGTTC
TATTTGCTGCAGTATGCCTTCATGACCGTAGTTCTGCAACACGGGTCATGTTGCAAAATT
ATTTCCGCAACATAGATCTTGTTGCGGAATTTTCTTGCAGTAACTATTTTGTTGCATTTT
TCCTACAACTAATGTTTCGTTGTAATTTTTTTTATAAAAAAATCTATTATAAATGTTTTG
TTATAAAGCATAAACACGTCATAGACCATTACAACACTGTGTATGTTTTAGAAACATAGT
CCATGTTTGGAAACCGCATAACCATTTGGACGCGGGAAGGTAACGGATGCTAACCATTGC
AATCCGCCGGCTAATGGTTAGCTTTTTCCATATACATAATATACGTCTATGTTGTGTGAT
GTCCGTGTTGTGTGACACCCTTGCACTCACCCATGTATGGAATGCATTGAAGGCCCGGAC
GTCCTAGACCCGTTCTTCATGTTGGATCTGATCCACGCTAGTCCATTCTGCCTCATAAAT
ACTCGACATCAGATCAAATCATATTGAAAGTCCACACTCGATCGCTCCGCTCCGTTTTCA
CTCCTAGTCCCCTCTCCTTCCCTTTCCCTTCCCTTCATCATGTGTGACTTCGTTGCCGAA
TCCATCAAACATCCGACGACGAGTCCGACCCCTTCCACTATGGTCTGGCAACACAATGCA
TGAAGTTGGTGACCGAGCCGCCCCGTCGTGCCCCGCCCAACTCTAGATATGTCGCCAGGT
GCGCCCCCAACCCTCCAGCATCAACCTCTCATGGCTTGCGGTGGGTAGTTCGTGCCCGCG
CAGTGCCATCGTACGAGGGCGCCCGAATTGGTGGTGCGGGCCACACAGAGGAAGGCGGAA
GCCGATTCCTCTCGGAGCTGCGCAATGTCCACTCCGTTGCCTCTCGAGGAGCCCCCGTGT
GAGGTCCTTCGTCGGTCATTCACCAGGTTATAAGTGCCTTGGCTAACAAAAGAAAAAACT
AGGAGACCTTGGAAAAGGAAGGTTTATCCTAAATCAACGGTTAGGAGGAGTGCGAGAGTT
AAACAAAAGAAAAAAAATTCATGATGAATTATGAAAGGATTTTTTTGGAATAGCAGAGGT
CTGGCGGACTTGGCTAAAAAAAGGTTCCTTAGAGAAGCATCGATATAATATAATCTGGAT
TTTATGGCATTACAAGAAACTCGGAGAGATAATTTCACAACTCAATTTTTAAATAGTTTA
TCAGGTGGGGTTGATTTTGATTGGCATTGTCTACCACCAAGGGGAAGATCCGGTGGGATC
TTACTTGGGGTTAAATGCGAGACTTTAGAGGTGATGAGTGTGG