Contig Data
morexGenes
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Map Locations of contig_63489 (3818 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_63489

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_73373 4 1028 bp AK362925 Not available Available None
MLOC_73374 1 285 bp None Available Available None
MLOC_73372 1 644 bp None Available Available None





CDS Structure of MLOC_73373






CDS Structure of MLOC_73374






CDS Structure of MLOC_73372






Contig Sequence (3818 bp)

>contig_63489 3818 assembly3_WGSMorex_rbca.fasta
ACTCTGAGGGCGCGTGCAGTCATCAGCCTTTCGCCGTTCCTGCTCATTCCGTGTCACGCG
CTCTGCCAGGAACGTGTTGATAACGTGTTAGAGTAAAACAAGATTGAATGAAAATGAATG
TACGATTAGCCCTGATTTCTATTGATTCTCAAATTTATATACATCTAAAAGAGGTGCGGA
AGAAGAGGTGCCTGTTCGGAGGCATCCCTTCAGAACAGGTGCCTGTTGGCAATGAAAGAG
AGAAGACACGACTATTCGGTTTGGACACATCCCTTGAATTAATATACTAATTAATTTCTA
ACAGAAAGAATAGCAAAAAGCTGCCAACGCGCAGACCATTGCGGGGAAAACAGAATTTTC
TTAGGCGCAAACAAAAAGGTTCGGTGGGAGTATCTTATGATTGCCACATAGGACAAATAT
TGAGGTGAAAGAAAAGAAACATAAAAAAGTGATTTTCTTTTCTTAGATAAGAGAAAGATT
TCTTAGCAATAATATGTGTCACTGTATATTTAAAGATATCTAGCTACACATCATTTGTAT
TGTCGTCGCTTAGTTACATGGTAAACTTGAGATAATATTATTTTATCAACCATTGTACAT
TATCCTTACTACCCTTACTGCTTACAGCAGAACGTAACTAACCAGCTGATATGGAAACGT
TGTCTTCCAATGATGGTGTTTTATTTGCCAAAGACACAATCTTTCACGCAAGCGGCTTTG
GAAATTAGCTGACAAAAACTGGCCAATCTCTGGCACTCGTCACTTCTATTGTAACACCAT
TATTAAGTGAAGTTCGAGAGGTCTCACTTTATTTCTTTTAGCGCACATGTACATCAATCA
GTTAACCCGCAGACGCAATTTTGTGATAAGCATGCTTGCACATTGGATGTCACCAAGAGT
TGGTTCGACGCTGACTCCTGGTCAGCAGTCCTATGACTGACTATTCGTGCATATTTCGAC
TATTTTAAAGTCCATCATCAAACTGAATATATCACTCAAGTTCAACGACTGCTGGTGCAT
TTTACTTTTCAAAATCTAATTTTGCACATGAGTTTGCACACAAGATGTAGCCTTGGAAAT
TTTATCCAGGGTACTGTAACATGGTTGTGGTTGGGCATCACCTTGTACACCGATAAAAAG
AAAACTGGAATCATGAACAAACTTGATATTCGTTTCATTGGGTAGGGCATGAAATAGACG
TCCTACATGCGCCATCAACTCAACAGCATAATGCACTTGGAGTGTAACCGAGTTCTTCCC
ATACATGGCAGATTAACAGTATAACTGCACCACATAGTAACATCCCTTAGTATGGCCACT
GAATCACACGAAAAAGTATTTGTTGACTGATGGATTCAATTACGGACGAGTTGACCTGCT
CTAGGCTAAAAACAACTGACATTGCCTGTTATTTTAGAACTGCCCTACTACTCACTTGTA
GATACAAAAAGGGCAAAATATAGAGGATGGTGAAAATAGCAAGGAAGAAAGATCAAGGCA
ATGCCCAAGTCAGCCCAGCATCAAATAGTAAGGGCAATGAAGTGCTTCTGCAGAGGCCAA
ATATTTCGAGTTAGAATGAGTGAGGATAGGTACACGAGGCTCATAGAAATGATTAATGTG
CGATTAGCTGCTCACATAGGTATGCAACTGACACTTCATGAGTACAGATTCATTGGGCTG
TTGGCCATTATGCAAAGTTTTCACAAAATGCAAGTTTTAAAATTGCGAACAAATACCCAA
AGCCTACAATTTCAAAATCCTTTCACCGTAAAGCAGACTTGTTGATGGAGGCATGTGAGA
ATCACTATCTGTCAAAGGTGGTGTGTGGAAGAATGGCAAAAAGAAAATTCAGTTCATCTT
CTAGTCAGCAAATCACATATCATGTATATTCATAACCATAATACTCCGAGAGACTTGTCG
ATGCAGTAGTATGTAAGTACCAGAACATAATCCAATAAGTGATTCACTGAAACCAGAACA
CAACTTAGCTAGAGTAAAATATCACCTGTACAAGAGGCAGAAGTGAGAACTCAACCATGA
AGGACCTTTAATGGATCTAACTGCCCACTACAGTAGCTGGAAGGAACAGCTGAGAGCCCA
ATCCTTCCTTTCCACTCTTCGCCAGGCTTGAGGGTAATTGGCTTCTCAACAGCTGCAGGC
TCCACACAAAGCATGTGCTTGTATTCTGAATCCCCAAAATCTTGCATAGCTTTTGCCTTC
TTATCCCAAGGGTTCCAAACAACTAGAGAACAACAGGTAATGATGAAGATGAAAGTAATT
TGCAGCAATAGACTTCATTAAATTAAGGACAGTAAAACTGAACCTAAACCGAGCTCTCAC
AGCGATTTGCGTTTTCGGCCGTCCGTTTTGATGATCTAGGAGTTACTGGCCGTTAGATTT
CGTGTGAAAAACTATCTGCCCCGTAGTGTGTGTTGTTAGAGTACTATATATGTAGCCATG
TAACCTTTCGTATTTACCCTATTGTATAAGGGGTTTTCTGCATATTACACACCTGTACAT
GCATATACACTGGCCTATGGCCTCTTGGAAATACTGCCGGATCCCGCCGTCCTCCACCGA
AGTCGCCGGATCTCGCCGTTCTCTGCCGCCACCGTCTTCGTTCCCGCAGCCCCTACTGGA
TCCCACCGACCCGTTCGATCCCGCAGCTCCTCCGCCAGATCCTACAGGCTCGATCCCGCC
TCTCGCCGGATCTCGCCGGATTTGCCAACTGCTAGATCTCGCCAACCCTTGCTGCCGTTG
ACTCGCCCTCGATCCCGCAGCTCCTCCGACAGATCCTGTAGGCTCGATCCAGATCATGTT
GACTCGATCCAGATCATGTTGACTCGCCAGATCCTTTAGGCTCGATCCCGCATCTCGCCG
GATCTGCCAATTGCTGGTTCTCGTGATCTCTGCTGCAGCCGGGAAAGCTGTCTATTTCCT
AAAAAAAATCAAAAAATATGTTTGCTGCATCGGGCTATGTTGTTGTTCCTCGTTGTCCGG
TGATTTTTGATGGCACTAACTACACCGAGTTCGCTGGCTTCATGCGCATACATATGCGTG
GCATTCGTCTATGGGGCGGTAGAATCACTTCCCTGGATGCTTAGATAGCTCGAGAAAGTG
CGCCACTTCTCCCTTAGAGCCCATCTATCTAAACGGGTACAGCTAGAAAGCGAGAGAATA
TCTTTATGGATATGAGTCTAAGGCAGAAGTCCCTGGCCTTCCGTACAATCTCTCTGTTCT
GTGTGTGAATGCCGATTGGGGAATTCGAATGAAACTTCTTTCTGACGAGATCTGCTGTCC
ACCACGTCCGGTTCCTCCTGTGGCCCCCACTCCGCCGACGCCCAGCTAAGCTTGCTGATG
AGGCCGATGTTCGTGCTTATGATGAGCAGGTTTTGACTTATGAGGAGGCTCTTCAGACGT
ATCATGGTTGGTGCTCTGTCTGTTTACACCCAGTGGCTTGATGAGGATGCTCGTGTTGCG
GCTGTTCTCACTGCTAGTGTTTTGCCTCAGTTTGCCTCTGAGTTTTTAGGTCTTCCTACT
GTTTCTGAGATGTGGACCCGTCTCCGTCAGCGCTATGAGCCCTCTGGTAATGCCTTATAC
CTCTCTGTGGTCCGTTAGGAGCATGCTCTTCAGCAAGGTGACTCCATTGTTGATGATTTC
TATGCACAGAGTTCTGCTATCTGGCGTCAGCTCGATTCTCTCCGCACCGCTGGTTGTCAT
ACTTGTCAGTGTTGCCAGGTTGTGCGGGCTGATCTGGAGTTTCATCGTGTCTATGAGTTC
TTGTCTCGGCTTCGTAAGGAGTTTGAGCCCCGGCGTGC