Contig Data
morexGenes
Links



Map Locations of contig_63429 (4551 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_63429

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_73339 1 753 bp AK356959 Available Available None
MLOC_73340 1 2428 bp MLOC_73340.1 Available Available LOC_Os09g38772.1, FRAME:-2, EVALUE:1e-180, 13109.m03873 protein MOSC domain-containing protein, mitochondrial precursor, putative, expressed





CDS Structure of MLOC_73339






CDS Structure of MLOC_73340






Contig Sequence (4551 bp)

>contig_63429 4551 assembly3_WGSMorex_rbca.fasta
CGAGCCGTTCCCGGGTCCACCGGAGGGCGAGCCCAGCCCGCCGGACGTCACGCCGGGGCC
ACCAGAGGTGACTCCCAGCCCACCCGAGGTCACGCCGTTCCCGGGGCCACCGGAGGTGAC
TCCCAGCCCACCAGAGGTGACGCCGTTCCCAAGCCCGCCAGAGGTGACGCCAAGCCCGCC
CGACTACGCGCCGTACCCGCCGCCGGAGTCCTCGCCGGGGTCCGGGTCGGGATCGGGATC
GTCCCCGAGCCCGCCGGGTGGCAGCTTCCAGCCACCGGTGGTGCTCCCGCCGACGACCGG
GCCGCCGTCGCCGTCCGGGGGACACGGCGAGTGGTGCGTGGCGAAGCCGTCGGTGCCGGC
AGCGATCGTGCAGCAGGCCATGGACTACGCGTGCGCGTCGGGCGCCGACTGCGAGTCCCT
CCAGGCCGACGGCACCTGCTTCAAGCCGGACACCATGACGTCCCACGCCTCCTACGCCTT
CAACAGCTACTGGCAGCGCGCCAAGTCCACCGGCGCCACCTGCGACTTCGGCGGCACCGC
CATGCTCATCACCAAGGACCCAAGTAAGCCACATCATCTCCTCCCCTTCAACCCCATTGC
CATGCATCTTCCATTCTTCTTTGCTGTTCTTGTGATTGACTGATGCTGTAACCATTAATT
TCTTGCTGTCTTGATCCTCCTTTGCAGGCTATGATAACTGCCATTACAGTGTGATGTGAA
GACCAGATCTAGATGCCATCAGTGGTTTTGGAAGCTGGACGCCATTTTCTGCTCAAGTTC
GGAGGAAGTAGTGCAGACATATATACTTGTAGGCTGTGTTCTGAGTGTGACCATGTTCAT
TTTGTGTATGTATGTACGTAGCCACCTAACTTTTGCCTCCTTTTGACACATATTGTTTTG
TGTAATTCAGAATAATGCTACTCCTATGTAACTTTCCATCTTGAATTTCATAATGGCGAC
CATGTTCGTCAGTTCATAAGTCTCTGACAACGAATGCTTCACTAACATGAACATCAGCAG
ACCACCGAGAAGCACATTCAACTGTTTGACCGATCGACAGACGTCGACTGAAGAACCAGA
TGGTATGAAATTGTTTGAGATGGAGGGCACGACGATCACGCTCGTCGAGCTTTTATTGCT
AAGTTGAATTTACGTAATGTGCACACAAAATCAACCGACCCGGTCATCTCTTCGACGCAC
ACATAAACACAGATACAGTACGTACTACCAAGCCCTCGCTCAGGCTGGAACTTCATCGGA
AGAAGGGTATGTCTGAAGAACGTAAACCGGGTCGCCGACCTTGACGATCCTCCCTTTGCC
CTTTGCTGATACCGATTCCTTGCAGACCAGATTTTGCCCAAAGTAGACCTGCAAAACAAG
AGAGGTTAACTAACAGCTTGTTCTTCTACTCTTGAAGAGTTTGAAGGGGGCAATTAATTA
CCTTCTGCTTATTCTTGTGGCTCGGACGGAGCACTTCACCGGACCGGAATGTCAGCATGG
TTTCTGTAGGTTCGGTGCCAAGTATTCCATTCTCTTGATTAACCGTAGGCACCTGATTAA
TCAGCAAATACAGAAACTAAGCATAGAGTATGTAGTCTTAATTATATTGCCTTGTGAATG
TTAGGTGTGCACAACATGCTGTTGAATTCTGGTCGTAGCGAACAAGTTCATAATTATCAG
CATTGTGAAACCTATGCCCATCACTCAATCTGGTGTTGAGTTACTTGCACACTTGGAGAG
TTGGAGGTGCTTCTCAATTTCATCAAGATTACCTAAGGAGGCCAGGATTATGCCAACTCA
CATATCCATTAATCGCTTGCACTCAAATAACTAGAAGGCTATTCAAGAACTAAGCCAACT
TAGGACTTCAGCCTGTGCTAATTTTTCTATGGAGAGAGTGGGACAGAAAAGAAGCAAGAA
ATTCACTATCGCCTATCGGTGATCAAGTTTATTTTCAGAAAATGATTGCAGAAATAAGTT
TCAAGCCAGGACAAGTAAGAGCCACAACACTGGATCTGGAAATTTTACCTTGCAACGGTC
GCATAACTTCACACCGTCAAATGTTAGCTTGTCTATCTTTATGGTTTTCCACAGATCCTC
TGCGTAGGGGTGGCATCCATCCACTAAAATACTGTCAAACCAAACCATGTCTGTAAGAAG
GTATACTAAGCAACCTGCTATCATAGCACGAATATATAACTGACTGAGTCTTGGTTATGT
CTCAATCGACTGAGATTTAGCAAGACTGTAATTCATAATACATAAAACCGCCAGCAAAGA
GGTTGTTCCGAATGTACAGTGTGCGGCTTACTTTGGTCTGAAGCGATTGATTGGTACAGG
TTCCTTAAGAAGCTCATTTAGTGCATCCAGTGAGCCCTGCAAATTATTTGGACTGTCAAC
TTGAGCTTTGTGTTTAGCAGCAGTGCACTGTGCACACAGCCTTGATAGTTCATAAACAGG
CAAGCAGTCTGAGCTGTGAAGTATGAACTGTACCTGGGATGCTATCAGGAACGGGAAGCA
ATCCGTGAAGGTGAGCTTGTAGCCTTGAGCATACTCAGGATTAGTCGGTCTGATTTCGGA
CTCTGTGAAAAAGGATGAAAAAGGAGGCATTCTCCATAAGTACCAGCGAGACGATCTCAC
CAAGAAACATTTTCTGAATATTTGTTGACAGGTATCCAAGGTATATTTTGTGACGAAAAT
ACATCACAATTCACAAGGAGTAAACCTTCTTTAAACCGCACGAGCCGGCTTGGCTTCCCG
AAATAGGCGGAGAGCCATTCAGCTGCTTCAGGGCCTTCATCATAAGCAGAACCAGACCAC
TCCCAGACGGAGACGTCGTCAAGCGTGGCGTGTTCCGCAGCAAGAGGGACCTTCAGCGTG
TCCATCCCGGGTGCTCTTATAACTGCAATCAGCAGAGGATAAAATAAAATCGATGTTTAG
GATATTTCTTCTGAAGCATAAAAAAGGGAGGACATCACACTTCACATCCCAGGTGCTCTT
ATAACTGCAGTTAGCGTCTGTGAAGCATATAGAAAGGAAGCGGCGTCGCAAGTCACAGTG
TATCAAAGAGTATATACAAGTTGGAATCCCCAGTAATCAAATTTTTTACGAAGAAAAACA
CAGTTACTTGTGATCAAATCTACTAGCGTTAGTGTATTGCTTGGTCAAATAACAGGCAGT
ATTTTCAGCAACACATGGGAGAGAACAATTTTGCAGGAAACTAAATTAGTCTGAACAAAC
TGTCTGTGAAAACAAAACAGAGAGACAGTGCCTAAACTTTCTCTGATGACGCTCCATTGT
GGTTTACACAACTTAATTTCGAAAATATTTAGTTACGATGAAAATTAGAGCACATCTTCT
GTACCAAAATTACTCTAGTATATATACAACTTATAATAAACAAACAACTCTTGATAAAAA
TTAAATTACTGCAGCCCATCTTCTCCTTTGGTTGAACATATCATACTCTAGTACTAGATC
AGCTGGAACAAATCAAATGTCTAATGTAAATGATCAAGAAAGAAAGAAAGGAAAAGAAGA
GTACTACCCAGGCAGGAGTCAGGGGCGGGCTGCCAGTCGTCGTCGAAGGCGGCCGGCGGC
AACTCCACCTCGACCAGCGCCATCTTGGGCTCCACCCGCTGCGTGAGCGCCCTGCCCTTG
GCGTTCACCACCAGCCACTGCCGGTCCCACCTGAACCCTGCAGTCCGTCCACCGGAGCCA
TCAGATCAGAGCGAGCTCAACAGGACAGAGGAAAAATGATTGGTTTCCGTGAAGCTGGGG
GACAGCAGTAGCTAGTACCGGTGGCGGTGACGGGGGCCTGCGTTACGGAGACGCCCTTGC
AGGACTTGACGGGGTATATGAGGATGGACGCCACCGTCGCCGCCGGCTCCCCCGACGGCC
CCTCCTCGCCGCCGGTGCCGAGGAGGGAGGAGAGGAAGGACGCCGCCTTCTCCATATCAA
GAAGTAGGCGAGGAGGGAGTGAGTGCAGTGCAGAGAGTGGTGACCGGAGAAGCGACAGCG
ACAAGCGCCTTATCTCACCGCCTCCCTACCCACCTGCTGCGGCGCGCCATTCGGCCGGTT
TGGCACGCAGCGTCCGATTTTTTATACATGGAAAGAAACGAACTGTGGCTTCCCTTTCTC
ATCCCCGGACGAGCTGCTGCTAGTGGGGGTGGGGCGGGCAGTTGCGAGTTTCCCTTTCTT
GCCACGGTAGTAACTGCAGGTAAACGACCCGATACATGATGTGATCTGCGCCGACACCAA
TCCCGCGCGCGTCCCGACCGTTGGATCTCCATGCAACATCCCCTCGATGCAGCAAAATTT
TGATGCGATGTAGCAATTTTTTCGACGGTTATAACAAAAAACAAAATTTATGGTAAAAAA
GTAATATCTACGTGATCGTAGCAAAAAAAACGAAGCTGATGATGCGCGGTAGCAAAAATG
AAACGCTGGTTGTAACAAATATTTACGTGACGTGTATGCAACTTTTTTAGTGAACGATTG
CAGTAAAAAATGATGCCGGTTGTAGCAAAAATTAACACGGTTGTAGCACAA