morexGenes - Barley RNA-seq Database

Contig contig_63334
Source Contig contig_63334
Contig Data
|Contig Location|
|Microarray Probes|
|Predicted Genes|
|CDS Structure|
|DNA Sequence|
morexGenes
Links
Map Locations of contig_63334 (6775 bp)

Morex x Barke POPSEQ 2013	Oregon Wolfe POPSEQ 2013	Morex Genome Release 2012
	No map location
Predicted Genes from contig_63334

Gene ID	# CDS Predicted	Max CDS Length	Probes in Cluster	FPKM by Treatment	FPKM by Replicate	Top Rice Hit
MLOC_73301	3	1909 bp	MLOC_73301.3	Available	Available	LOC_Os03g05290.1, FRAME:-1, EVALUE:3e-130, 13103.m00556 protein aquaporin protein, putative, expressed
CDS Structure of MLOC_73301

Contig Sequence (6775 bp)

>contig_63334 6775 assembly3_WGSMorex_rbca.fasta
CGCGGGGTATGTCGCGCTCAGCCCGCGGCGGCGTCGCGGCGCTGGCCGGGGGCCGGCGCG
TCGCGGGCCTTGTCCGCGGCGCCGGCACCATGCTTGCCGCCGGCGGGCTCCCCCGATCCA
CTCACCGGTCATCAGTCCTCTCCATGACCGCCGCGCGCGCGCGACGGTATCCGATGGCAC
TTTTGAATGTTGGTGCTTTTTTTTTGGCGGGCATTTGAATTCCGGTGCTTGCTTCCACGC
GACTTGCAGACATGCATGTACTTACTGTACGGTGAACTGCATGCCGGCCGTAAATCAGCC
TGTAGCTCACCGAGGCCACGGTACCCGATGGCACTTTTGAATTTTGGTGCTTGCTTCCAC
GCGACATGCGGTTTGCGGACATGCATATACTTACTATACGGTGAACAGCATGCCGGCCGT
AAGGCTGGCTACAGTGAGGGTAACATAGCTAGTACTAGTATAATAGTTTTGGGACTAGCA
AACATGCTGATGTGATAAGTAATTAAAGAAAGAAGAGGGTTAGAGTAACATAGATAAATA
CCGTATCATGTTAAATGCTATGCTACTACTCCCCCGGTTCCTAAATATAAGTTTTTTTAG
AGATTTCACTAGTGGACTATATACGGATGTATATATACATACTTTAAAATATAGATTCAC
CCATTTTGCTCCGTATGTAGACTATTAGTGAAATCTATTAAAAGATTTATATTTAAGAAC
GGAGGGAGTATGTGTCATGCATGTCAATAAATAAGATCACCTATAATACTAATTTATAAT
ACAATACACTATAAAAATAGTATCATACAATAATAACATATACATGATATATATCTCACT
CTTCACTATGACCAGCCTAAATCGGCCTGTGGTTCGCCGACGCTGGTAGTGTCAGGTCGA
CCGTTCCGCGGAGCGAGGCTGCACCAGTAAATTCCACTGGCCGAGAGGATGCATCCGAGA
ATTATTAGCTTGCTGTCACTGTTACGGCCACGCGGAGCCGACAAAATCACCACGAAATCA
GCTAGCTCCATCAGTCCGTCCGTCCATGCGTGGCGTGACTGCTCCGTTGATCGGGTTTCG
AGAATTCCATCGGGGATGGATACAGTGCTCTCCAGTCACCATAGCTCGGCTCATAAAAGC
CTCGGTTCGAATTTCAGTAAAATCTGGCAAAACAAACACTGAAAACGAAACGACTCAGCA
GGTTACAACTCTTCTCGGCCGTCCGATGCACCCTCACCCGGTTCGTCCTCGGCCCTTGGA
TAAGGCTGATTGTACACATAGTAATACAACATTTAATATGATACTCAATCCTCTCTTTAT
TCATTTAATTCTATGCTACCTCATCAAATATGTCTAGTAATTGACATGCATGATACTGTA
GTACTTATGATACTCTCATTACGACCAGCCTAAGTGACGAAGTGTTCTGAAGACGGCCGT
GACGGGCAATCTCGGCTCCACGTCACGCGATCTTCCGCCACGTCGAGAGATTTAAACGCC
GCAACAGCGACGCCCTCGCATCCTGACTCGCTGCTCATCATTGCCAGAGACACCACTTCG
TAATAACCGTGCTGTGCTGATGTGCAATCTGGATAGGGACAAATACCAGCCCAAGCGTCA
CACTGAGTTCGCGTGTACATCCTAAATATAAGTTTTCTAAAAAATTCTACTATTAAATTA
CATATCAATATATTTTAAAATATAAATTTGTTCATTTTGTTACGTATTAATTCCCTGTTG
AAATGTCTAAAATGACTTATGCTATAAGAACGGAGGGAGTAGATGGCTAATCTCTGGCTA
CGGCCCAAACCGCTGGGCTTTCCGCTTCTCTCATACTCCCTTCGGATCCATGTTAATAAT
CGCTAATTCGGTAGGTATCCCTGACGAAAAATCGCAACTGGATTAGCTCAGCGACGACGG
TTCTACCGTCGTAATCAGGTGATCGGATGAGACAAACCGGGAAGATAACGCGAGCGATTA
GCGAACTCCCAACGGAACAGTATTTGTATAGGCAGGCGGCCCCGAACAATCTGTTCTTAA
ATCACAGCTTCGATTAGCCCACGCACAGCAAATTAAGACAGTGGTGGCGTCGTATTCATG
TGATATCAGACGAATAAGCTGGGAAGATAACGCTGAGCGACAGCCGCGGTCGATGAGTGC
TGTGGTCCAGACAGACGCTTGTGAAGTAATAATATCCAAATGCCAGTATTTAGATTAGAG
TCGCCTCTGGCATCCGATTGGCCCGGATGATAACAATTCGCTGACAATAGGATTATTCCG
CCGAAGATTCCAACGGATTAGCAGTGCAGGCTGGAGCCAAATCCTGAATTTAATTGCAGG
GAACTTGGAGCACTCTTTACATCCATATTAATTGACGCAATCTCTATACAACGTTCTGCA
AGTACAGTAGGTTAAATCCGAATCGATTTACTTATAGTTACTGCAGGTTGGTAGTGGTGG
GTGTACCTGCATGCGCTGGCGCCGAGAGTGCGCGCCAAGTTGCATTTCAGCCAGGCTAGG
CACCACCTCGTCCGTTGCTCAATACGCCGCATACATTTCTAATTTCTTTTAGTAAAAAGC
ATGGCCGCATAAGACAAGGATAAATCTGGTTTGGTAGTACTTATGGTGATGATTAGCGCT
CCCTTTCGAGCTCATCGACCGCTAGTTGTGCAGTTGTTCCCGAGAGAGAAAGTCAGAAAA
CAACAATACACTCCACTCCATTCCACGCCACGGAACAGATGAAGACAAATGCAGTACATC
AAAATAATGGTTGATGTGTCTGTCATCTACCATGTCCGTGTCATCCACGTCGGAGTTAGT
GGCGGCCAGGCTGGCGGGAGAACTGAAGCAGCACGAGCCTTCTCTAGAGCTTTGCCTGCA
ATTGCTCTTGTAGAAACTGTAATTGCTCTTGTAGAAACTGTTTGCAGTCGTCAGTAGATG
GTGTACGGACTTGAATGTTAAATTTTACTTTGATGTTTTTTTTACAATGTTGACAGGCTT
CAAAAGGGTAATGTGTTCCACAGCCCTCCTGATTGGAGTTGTTGATCTAATTCAGTAAGC
TTGTTATTATAACTAAATTATAGGCGGCACCATGAACGGACCAAACGATGCGTAGACTTT
ACATTGTTGATTATTAGGGTGCTACTTGAGCTCTAAAATATGCTCGTGAAGAGGAGCAAG
CAGTTGGGTCCATCGGATATGACAGTAAACGCGCCAACAACCCCACGTAATGTGCATGAT
TGCATCGGGATGGCGCGTGTGTGGTGCACTCCGGTCCAGCCGGACCTGATAGGATCGATC
GGCCCGGCCCGGCCGACAAGAACAGCTCAGCCTTATCACCACTCCGACGTGGCGACGTAC
CTCCCGCCTCGTCGCCACATGCCACTCCATTATTGACACTCACTGACAACCTCGTGCCTC
CGCAGTAGAGGCAAGTAGCCACGGCGATCTGAGCCACAGCTTCAGACAAACTAAGCAGTG
GATCTCACTCACTCACTGACATCCTCACAGACGGATTAATTCATTCGAGAATGCAAGTTT
CTAGAGATCCATATTCCAACTCAACTGAACTTGAAATTACTCGGGCGGACGAATTCACAG
GTTTTACACAAGCAAATTGACAGGGTCGATCGTCACAGGTTTCACAGCACCACAAACTGA
TGGACCGATCGACCCTGGGAATGGGATGGATTCATTCATTCAAAGCAAACTTAAACGACT
CATGACTGGAAGCAAGGGGAGACGCGATCGACCACACGGACGGACGGGCGGGCGGGGGGC
AGGCGGCGGTGAGCTTAGTAGTCGGTGGTGGGGAGCTGCTCGTGGGTGCGGGAGATGAAG
AGCAGCTCGTAGATGACGCCGGCGAGGCCGCCGCCGATGAGGGGGCCGACCCAGTACACC
CACTGGTACCCCCACTCCCAGCTGACGAGGGCGGGGCCGAAGGAGACGGCGGGGTTCATG
GACGCGCCGGAGAAGGCGCCGCCGACGAGGATGTTGGCGCCGACGATGAAGCCGATGGCG
ATGGGCGCGATGGTGCCCAGGCTGCCCTTCTTGGGGTCGACGGCGGTGGCGTACACCGTG
TACACCAGCCCGAAGGTCATGACGATCTCCAGGACCACCGCCTCCCACGCGCCGATGCCG
GTGAGCCCGAAGGTGCCGGTGGGGAGCCCGCCGGTGGAGAAGCGGAGGAGGAAGCAGGCG
GCGGTGGAGCCCAGCAGCTGCGCCACCCAGTAGAGCAGGCCGCGGAAGAGGGTGATGTTG
CCGCCCACGAAGGCGCCGAAGGTCACCGCCGGGTTCACGTGCCCGCCCGAGATGTTGGCG
CCCACCGACACCGCCACGAACAGCGCGAACGCGTGCGCTATCGCCGCCGAGATCAGCCCG
GCCGGCGTCGCCACGCCGTCGGGGCTCAGCTTGCCTGCGACCACGACCCAACACGGGAGA
ACTGTCAGTCAGATACATGCATACATACACGATAGAAACACTGATGATTCACCACATGGA
TATCCCAAGGGCAAACTGGTCATTGTGCGCCAATCATACAACCTAAAAAGCCTGTATCAA
ATCAATCAAACCCTACTGACTTCCTTTCTGAGGCAATTTTCTCTAGGCTACTGGTAACGC
CTCATCATAAAGTGTTTCTTTTACTTTCTTTCTTGTCATTTATAACTTGTCACCAAAAGC
AGGAGTTTTTTCCCCCTCTCTTGTCGTACGTGCACTAGCTATCCATTATCATGATGCAAA
TTACTGGAGTACTAATCAACTACTACCTTAATTGTTCCTGATTAAGCTACCACAGGGAAG
AACTTACTGAAGGCCATGCCGGAGCCCTGGCCGGCGAAGACGAAGATGAGCGTGGAGATG
AACTCGGCGAGCGCCGCCTTGAGGGCGCCGACCTCGTACACCTCCCGGTGGCTCCCCACG
GCGATCCTGCTGACCGGCATTTTCGCTCACCTCCAAGCCTAGCTCGCTAGAGAAGAAGAA
GAAGAAGGGGGTGGCTGGCCGGAGTCGGGAGAGACGAGTGGCGTGAGTTGGTGTGGAAGG
AGCGGGATAGGGAGGCGGTATATATACACCCGAGCGGGCCGGTGAGGAAGGAGCTGATGA
AATGGACGGTGTGGAGTGAGGCCCCTGGGAAAATGCCATATTGGGTTCGCGTGCTTGTTA
CGCCTGAAGCTTCTGGACGGCCGTCGCCTGTGATTTTTGGGAACCAGCTGGACGTAACTG
CATGCCGGAAGTAAGTGCGTGCGTGCGTGATGTGGCACTGGTAGTTTCGGGAATTGATGG
GAGGGGAGAGAGGATAATGCTTTCTTTTTTTGGGTCGATGCATGGGGTGAAATTCATGGG
CGGAGATAAGGCTTGGTACTATACAATAACAGGTGCCAACATGTTTGTTTGTTTGGGAAT
GACAAAATCAAGATCGGAACTCTGGTGAGCTTCCCAAAACGAGACCTAGGTGAAAAGCAT
AGGTTGTCGACGAGCTCTCGCCGTCATCGGTGATGTTTTTCCTGATGTTAGCTGTGCGAG
GATTGAACGGTGTGTGCTAATTAAGCGAGCTCCTTTCGCGCATTCGTAGCACGAGGCCGC
GCAGCAAGCAAGCAGTCGATGCGGTGCTGGGATGGACCGGGACAGCAACCGGCCACGGAG
CTGTCAGCGGGGGCAGGACTCGTGGCCCGTGTGGGTTTGGAGGCCGGGCCGACGTGACGC
CTCCGGGCGGCGCCGAACCGGGGCGCCGGGATTGGACGCTGATTAACATTTGGCCGGCGG
TCTACGGCCGCCACGGCGACCGTGAGCGCGGCCGGGGAGCTGCTGATTGGCCGTGCGCGC
CCGGACGGGCCGACTTCGGTGGCCGTTGCTTCTGGCTCTGGATCTGCCGCCACGGCCATG
TCGTTTTCGGCGGTAAATCCGTGCTCCAACGGCTGTATCGGTCGATCTTTTCATCTTTGT
TGGCAGAAAAACGGAAGAATTCGATCGATCTGAAGCTCCTCGAAATGCAGTGACGCGTGA
TACGATAACTCTTTTTTTTTATTTTTTTTGGAACGGGGTGGGTCGTGAACCCATTCTTCT
TAGACAATTGCGTGCGCCGTCGGTCGGTCCAACGATTGATTGCTGCCGTCGTGGACAAAA
AACGGCGTCCGGCCCATCTCCTCCGTTGCCCCCGTGGCTGGTTCGACGGGGACACGTCAC
CCGCTAAACCAACCCGGCTGCACGCTAGGCGCGCCACGCCTGATGCCCGTCGTCGCCGCG
AGCTAATAATTGTCTGACAGCCTCGCCGCCGTTGAATGGCCGTCCTGCCCTCGGTGGCCT
TCTCGAACCCTCCACTCCCTAATCCCATGCGATGCGCTTGGAGCGCCATTGACCAACGGT
CGATCGGGACAGCGGCGTACGTCCCTCCTGCCCATCTACGGCTAGTACCAAGCGCATCTC
GGCAACCCGCAATTTTTCTCATCCGCAAACAAAAAAGATCAGTCCGCGAAAACGAGTGCG
AAAGGCCGCCATTTAACCCGTCATGTATATATCCGTAAGAGCAATCCCAACGATCCAATT
TATCCGTTCGGATCATCCGGACACAAAAGCTGATCCAACGGGATGACCCAAACAGACGAG
CGTGTCCGCCTGCTGTCTGTTCGTTGTCCATACTGACCCAAGCTAAACGTAAAACTGAAT
CATAAATGGGTCCGCGGCGGATAAAACTGGATACTCCCATCGTCTGCGCCCTGGTCTCAC
CTGTCATCGATCCGCCCCTCCCCAAGGCCGCGGCCGGTGGCGCGACAGAGCAACG