Contig Data
morexGenes
Links



Map Locations of contig_63333 (4776 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_63333

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_73300 2 1412 bp MLOC_73300.1 Available Available LOC_Os06g35960.1, FRAME:-1, EVALUE:4e-99, 13106.m03713 protein HSF-type DNA-binding domain containing protein, expressed





CDS Structure of MLOC_73300






Contig Sequence (4776 bp)

>contig_63333 4776 assembly3_WGSMorex_rbca.fasta
TGGCCCGCATCATATTGTGTTTAACAAAAAAAATCATCGCACTCCTCCGATACTACTAAT
CCAATCACTATGATTTAAAACATATAATTAAATATCCATAAAATGAGAATTATTCTTTCA
AGCCGATCATCAGTGCAAAAGGTCTAATGCATTGTTGTTGTTTTTTTTTGGGGGGAAATG
CATGCATTGTTCGACTTGTGGGCCGTGCTTGCAAACAACTTTTCTTATGTCAATTGGCTA
AAACAATCCTAATTATTCAAGATAATCGTTAAGCTTTTCAGACAGGATTAGGATTTTATT
GACCATCCTGCTTTAGTTAGAGCACTATGCAGGCCCCATATAATATGTGAAGGCGCAACG
TGCATGTAATCTCCTTTATATTAAGCAAGGCACGTGATGCCGCTAGCCAATGCGAACGTG
TCGTGTATATTCATCCAACCCGTAATTCACGCTGAGGATTTCCTTCCATTTGAGGATTAG
AGGATGTCCTTTCTTATTTTCCTCCATCCTTATATTCTTAGACGTGAACTGCTCCTTTCG
TATATTCCTTCTCTCATATTTGCTTCCTTTTTTGCTTCTTAACTTTCTCTCATATTTCTT
TTAGTCGGCTGCATGATTCCCTTCTTTAATTTTCATGAGAATTGGCAGCCTGATCGGCTG
TGTGATTCCTTCAATTCACATGACACGAATTCCGTTAATTATGCCAAAGGAACCCTTCGA
TTTCCTTCCTCTGCTTATTGATTCTCGAAACGGTTATTGATTTTAAATTGCATACATATA
TAGATTGATAGAATGGATGGTAAAGAAGTGATGTGGTATAATTTTATAAATTAATGGTTA
CCTTAGTTGGTTGTGCACATTATCATTGAGCTGCATGTCACGGTTTCGCACGCTGGGAAC
GACGGATGGACCAAGCGAGCCGTATGGAGCTATGCACGCTGGAGACGATGGATGGGCCAG
GCGGGCCGTATGGAGCGTAGTCAAAGCCCAACCGGATTAATATTGATTGCGGGTTTATTT
TTAAAAAGTGAAGGGTTATTGTGTAAAGCACGCGTGACGGATTAAAAATACATATTTCCT
TGCATAAAAAAATACATATTTCCTTTATACCGCAAATATATGTGCCCGATCGCTGTATAA
TTTTTGCCTGAGTTGAAAACGATGGTACGTAGGTCTGTATTTATTACAGAGGTATTTTGG
CAAAATCCTTAAAATCTGACTTGGCTACTTTTTGTTGACTTGTAAAGCACACGAATTGAC
GCCACTATTGTTGACCGTAGCTGCCCAGCGGAGGAGGCGCCCTCAAAACGGACAGATAAA
ACCCATTGCGTGGATAAACGTCCAGATAAAACACGAATTTGCAAAGCGTGTCGTCCCCGG
AACAAGGCAAATCGGGAAGATAGCGGTCAAAATGGCAGTCACGCAATGCCAATAATTCGG
CCATAAACCAAGCAGTTAGCACACGCGGGCAGGACATTTCAGCCGGACGTCAGGGCTCAT
CAGTACCCACTGTCCACTCCAAAGGCAAACGAGCAGCCGGCACCGCCGCCGCCCGACCCG
GCGGCCGCCTCCACCGGCACCGGCACATTGGCGAATGCGTCGCCGTCGGCGTAGAACCCC
GCGAAGTCGACGGCGTCCGGCCCAAACGCGGACACGTTGCCGAAGTCGCCGTCAAGCAGC
AGCCTCGCCCTCTTCTCGCCGCCCTCCACCGGCTCCTGGTCGCCGCTGGCCGCGTTGCCG
CTGTTGGCGACCAGGCGCTGCAGCGTGTCGCGGTCGCCGACGATGGTGAGGAGGAACGCC
AGCATCTGCTTGGGCTTCCGCTCCGTCTCCTGCACGCGGCGCCACATGGCGGCCACCCTG
TCGTCGATGGTGCTCTGCTCCTTCTTCAGCCTCACCACCTCCGTGGCGACCATGGTCATG
TCGTCGCCGGTCAGGTCGGCCGCCGACGCGTCCTTGCGCTTGCCGCCGCCGCCGGCGACG
GCGGTACCACGGCGGACGATGTTGCGCAGGAGGTGCGTCTGGCCCCGGAGGAACGAGCCG
TGGGCGAACTCCCACCGGTCCGGATCCACCTTGCGGAAGCCCTGAGGTGAAGCGGAAAAT
AATCTCATCAGGGCAGAATCTAGTGCAACGACGCTGGCTCTCTGAACTTTGTGAGAACTA
AAATCTGCGCTTTCCGCCTCTAGCCCGTTGAATACGTGCCACGTTCTTGTGCTTCAAACC
ACGAACACATAGAAATGCCTACTGCTTCCAACTCTTTTCTTTTTGGTACACTTTTTCGAA
CTCTTTCAAGTTTCAAAGGCGCAAAATATTCAGAAGTGTGTCAGTGTGCGTGTGACATCG
CGCGCCATGTGGTCTTCATATGTTCACAAATCCGCACCAAACCAGTTTCCAGAAGAAAAG
AAAAATCGACACCCCAACCACACACGCGCGCGCAGTAAAGACGAACTATATACTCCCAAA
AAATGTCACGCATACTGCATACACAGTTGTACACACACGCACATAAGAACTTGTACTCCA
CCGGAGTACAGAAATCTCTCTCTCTCTCTCCCTCTCTGAATCAAGATAAGTACAGGAAAT
GGACAAGACAAATGGAGGATTAGTAATATGAATCAACGGACTGACATAGGTGTTGAGCTG
GCGGACGAAGCTGGAGAAGTTGTTGTGCTTGAAGTGGGCGGGCAGCATGGTCTGCGAGAA
GACGAAGGGGTCGGCGACGACGAAGCTGTTGTTCCCCTTCCCCCACCCGATGACGCCGTC
CGTCCCCGGGTCCTCCACCATCCGGTACGTCTTCCACACGAACGGCGCCGCCCCGCCTCC
GACGCTCGCCGCCGCCGCCGCCATCGGTCTCCCTCTCGCTCTAAAAGCGCCTCAAGATTT
GTCCTGAGATTTCTTGATAAAGTGAGGGGAGGAGGGCATAAAGATCAAAGGAGCTACAGA
AAAAGGTAAAGGGGGGCGTCGCCAAAGAAGGCAAGATCTGCCGGTCTGTGAACGTGGCGG
CCTCCGGTGGCCAGTTTTATAACGAGTTGATGCGCCTGTGGTGGGTGTGGGGGGAAAGCG
ACGGCGAGGAGGTGGCGACAGGTGCGTGCATCCACGGGCTCGGGAGGTGTCCGCCGGTGG
TCACACACGTACCCAGCGTGCCACCGCATCATGGGGCCCCGGCCGGGCGGGGAAAAAGCG
CTCACGGCCACGGCGCTCGGGTCCTACTCGCCAACGCGGCCGGGTGCGAGAGGACACCTG
CTATGCTCCGGGGAAGGGGCCATGGCGGGCCGTGTCTCGTGCTCATTGGGTGTCATATCA
CCTTCGGCATAGAAAACCTGGAAAGGGGAGAGAATCGGTGATTCGCGGTCAGGTCGCCGG
AGCACGCCGCGAAAATCGCGTCTTCCCGGATTGTTGAGCAGGAAGGCGCCCTGGATTTCT
CTTCAGTTTTTTTTTCTTCATTTTTTGTTGTGCAACGGAAGAGATTACTAGTTGAGTCCC
CCGCAAAAAGGGAGAAGAGATTAGTTGAGAACAGAGCGGCAACAGGATACCGGCCTGCTT
GCTTTCCAGCCATGGGTTCCCCGTCGTTTTGGCAAGACTACAGTTTCGCCACGGCCAGAC
TCGTCAAATTTCATCGTGTTGGATGCAACTTCCAATTTGGTATGCTGCCAACGAGAAAGA
TAGCGATGCCCCTCTCCCGATTAGGCCCACCCGTGCAGGCGCCCATGCCATTGCGACCTT
GCCCGGTGATGAGGGCAACGCTGTCGCGACTCCTACCGAGATCGCCAGCCACGCATTTCG
CGCCGTCCGACCGCTCGACGCGTGGGCTTTAGGACTCGTGCGGCCTCCACGGCGGTTGCG
CACCACACGTTTGCTTCTTCCTCGCCGCGAGCGGTCCCGATCAGGTTAGCAATGGTTCCG
CTGGGAGTGGGACTGGGTGTAGATTACGCGATCTTATCCCTGCGGCCATGACCACGACCC
TGCCGATAAAGCGGCAGACAGCGATACTGTACTCCATGCTGTAGTCGTATCCCGTAATCT
TGTGACCACAATGGAGAAATAATTGGTGATTCCTACGTACTTCTTTCGTTACAGTTTAAA
ATGCACGATTAAATTTACGTATATTTTCATAATACATAAAATTTAGGATGCATTGCATTT
ACTTCTAACAGCTAATTATTGTTTATTTTAATAGATTGGTTAGGTGTCGCTTGAAAGCCT
CGTACTTCGTGTTATGGAGTTGAACTAATATATTTATAAGGACAAGGAGATCGCCTACTT
CGCAAAGATTTACCGTGAGTAAGACTAGTCCTCCGTGAACGGAAGCCGTGCTGGAATAGA
CAAGGCCGCTTCTTGTGGACCCTTTATGGGTGGAGTCTTCCGTGGACTCTCGCAACCGTT
ACCCTCTGTGGGTTGAAGTCTTCATTAACATGGACGTACGATAGCGCCACTTGTCGGAAT
CATGTCAAAAATCCACGTGTCAACCTCATGTGTTTGATCNNNNNNNNNNNNNNNNNNNNN
TTACACTTGCATGTTTTATTTTTCGCTGCTACACTCTTAGAATTGCATGTGTATGGTGTA
CTTGACTTGCCTACTGCCAAATCTACCCCTCAACTAAAATTAGGAAAAGGCAGAATCTTT
ATCTTGTCAAGTAGTCTAATCACCCCCCATTCTAGACATACTTTCGATCCTNNAAGTGCT
ATCAGAGCTTTGGTCTCCATTGCATTGTTTTCACAACCTAGGAGAGTANNNNNNNNNNNN
NNNNNNNNNATCACCATAGAGGTCCATACTTCGATG