morexGenes - Barley RNA-seq Database

Contig contig_63263

Source Contig contig_63263

Contig Data

|Contig Location|
|Microarray Probes|
|Predicted Genes|
|CDS Structure|
|DNA Sequence|

morexGenes

Links

Map Locations of contig_63263 (4488 bp)

Morex x Barke POPSEQ 2013	Oregon Wolfe POPSEQ 2013	Morex Genome Release 2012
		No map location

Predicted Genes from contig_63263

Gene ID	# CDS Predicted	Max CDS Length	Probes in Cluster	FPKM by Treatment	FPKM by Replicate	Top Rice Hit
MLOC_73262	1	473 bp	MLOC_73262.1	Available	Available	None
MLOC_73261	1	467 bp	MLOC_73261.1	Available	Available	None

CDS Structure of MLOC_73262

CDS Structure of MLOC_73261

Contig Sequence (4488 bp)

>contig_63263 4488 assembly3_WGSMorex_rbca.fasta
CCTAGGACTATAACCCCATCAGTAATGGGGGGAGAAGTAGTGAGGAAGAAGAAAAGTGAG
GGAGAGAGGATGGGGGAGGGAAAAGTGAAGGGAGAGAGGAGGAGGGAGGGGGAAGATGGC
TGCTGCGCCTTAGCAGTAGCGCTGGTTGGCGAAACACGCTACTGCTAATATATTATCAGT
AGTGCATGTTTGCGAGCTCCGCTACTGCTACTCGAGGCCCACCATGTGGTGTAGTGCAGG
TTTAGTTGCACCGATGGGCCTTCGACACGCGCTAGTGCTAACTATTTAGCAGTAGCGCGC
TTAGACCGAGCCGCGCTACTATTCCGTTAAGCCCGATAACGACAGCCTGGTTCTCTTGAC
CGTAGCGTGTTTAAGCTGGGGCGCGCTACTGCTCAGCTTCTGTGTATAGGGTTTTTCCTA
GTAGTGCAAGAGGGTTTCCATGTATGCATGCACTGGAAATGTAAAAATGCCCATATGCTC
AACAAGGCAATACTAGGGCCATCACAAAATACTGCCATCAATCTTGAAGCTGTTTGTATC
ACAAGACTTCTGGATTTGACACTCTTTCTTTGGAATGCTAGAGTCCTAGAATGACAACAA
TGTGCTGCACAGGTGTACTTTGTTTGCCCGGTTGTGTGCGGGCGAAGCTCATGCGTGCAA
CTAAACCATTAATGGTCATGACTATAACATGGGTACGATATTTGTTACTGTATCTATCCT
TGATGAACAACCTTTTTGTCAATACCATCCCCAATCCAAGAGGTAACAAAAAATGACACT
TTGATGCAAGACAAGGAGGTGTTTGAAAGGATGCGGAGAGGACATTTGAAGTGCTCCAAG
TCTTTTTTGCAGTTGTTCATGGGACCTACTAAACAATGAGATCCAAAAACATTATAGGTG
ATGACAAATTATGTGATCATGCATAAACGTTATTGTGGAGGATGAGGGTGAGGGAGTTTA
CCATGGTCAGAATTTTCAAAACATGGGTGATTCTATACAACTTCTAAAGCAGAATCCGAT
AACATTTGAGGAATTTCTCAAACTACATCATCAAAATTGTAATCGAGAAACTCACATGTA
GTTTCAGAATGTCCTACTTGAGCATTTATGAGCGTTTTACATGGACAATTAGAACATGTG
ACCGAAATAACTGAATTCAAATTTGAACCGTTTATTTTAAAACTTTATGTTTGGATTGTA
ATTATTGCCACATTGGATATTTTTTCTTTGAGCTAGATGCACCATGATATTTTTCTTTGA
TTGTTTTTCAACCCATGTGAGAGAGATGTGTGTGATTCATATAAGAGAGAAAATGGTATA
ACACCAAAGAAGACACGACTATTACAAAAGCCACATAACATGGCCCAACTAAAGAAAACA
AACCATTGATGATCCGCATTGGCAATTAATAAACCGACAAAACCAACCTAACTAGAGCAA
GGGCACCACATAGGACACCAAAGTAAGGGAACATTTTTACTGCATAAGACTACAATAGAC
GATAACACCATTCAAACACGACCCACATCGATTAAAACCCAAACAATACTTGAAGAATGC
ATGACATCACTGAGCAACGAGGCCACAAACCCAACAACGCTGGGCCAGCTGTCACCGAGG
CCATAGAAGAAGGACTGAGGGGTGCATACGCATAAACCGAAAGGGAGTAGGAGGCACGAG
AGCACCAAAGACAATGTCCACCACGATCGACAAAGATGACATCAACCATGATCAAGTACG
CAAGCAAGGGAGGATCGAGGAAAAGGCCGTTGGATACTCGAAATGACATTGGAGTATTTT
TCTTGGATGACTCCAATTGGATGGCAATTGGTGGTGATGTCCATTTGGTCTTTAGTGATT
CGCCCGAGATGCCAAGTTTCATAACCTCACACATCACACACACTCGCTAACACACTGACC
CACTCGTCACTACTCTACCGTCCTACGTGGCACCTACTGCAAGGCGACGCCGTCCGACAA
TGTACCCCGACCCCTCCTGCTAAGGTTCCTTCCCCTCTCCCCGACCGCCACCGTCGGTCG
CACTCACCCTGCTCCCCGCCCCCTCCCCCACCCCTCCCCCGTTGTCGCCCCTCGCCGCGT
CCCCTGGAGGTGGCCGGGGCGGCAGCCCCCCTACTCCTCGTTGGCCTCCTCCCCCCTCCC
TCCTGCTATTGCGTCCGAACGGCTACCGTCGTTGACAATGGAGGTTGAGCCCTCCCGTGT
GCCAACGGTGCTGCTGTCCCTACTCTCGGCTCCTATTCGCCGCTATGCAGTCCTCATTTC
GCGATGTCGTGGTGAGTCAACGTGGGGGCTTCAAGACCGTGTTGGCGCAGGGTGGTGATC
GGTTTGGTGGCAGGCTCCGGAGCGTCCAAGGTGCTGGCAGGGGCGTAGCGAGGATTATCA
ACCATTAGGTTCAGCTCTACTGAAGAGTGGGTTCAGTTCTTTGCTTAGTCTTAAGCTAGT
GTAAATCTATAAGGGACATGTCAAATTTCATTGGGTTCACTTGAACCCAATGCTAATGAG
CTCGCTCCGCCCCTGGGTGCTGGTTGGGATCGGGGGAACCCCTATCGGCATGGCTGACGC
TGACGCGGTGGCGCCTGTCGGTGCTGTCGGACATTCCCGGAGGACGTCAGGGGCTACCCT
TCCGCGTACTGGGGGAAATCCTTGGCAACAAGGTTGTCATTGTCGTGATCCTTCTTGAAG
GCGTTGATTGGTACCGACGCTTTGGAATCTTGAAGCTTGGTGGAATATGTTCGGTGGACG
CAGCGATCGCGAGGCTTCTTAGTTTTTGTCAATTCGTCATTGTCAGCATTTATTTCTTTT
GTACTTCATGTGTTGTTTTTTTTAGGCGTTGCTGTTTTCTTCACCACCTATCGTTAAATG
TATTGCTTTGTAATAAAAAAGGGGAAACCCTTTTTCAACAAGGCGACGCCGTCCTGCAGC
TACGCCACCGCAAAACCCCAAACCTCTTCGCCCCCATGCTACCATCCATGCAGCCGTCCG
CCCGCGCGCGCGCGTTGGCCACGCCACCCGGTGGTGGCCAGGCCACCACGCCGCCACTCT
CGCGTGAAGGCTCCGTCCGCTTCCTCCTAGTCCCACTCTCTGCCCGTGCTATATAGCATC
CGCCCTCCGCCCCCTACCAATCTTAGCACACCCCCCTGCGCCTCCTCATTTCGCTCGCGT
GGGTTTAAGCAGGAGACGAGGCGGGGTCAGTTGGGCGGTTGGGTTGGATCCGATCCGGCT
GCGGCGGCAGCGACGAGATGGCGGCGCCGGCGTTCGCAGTTTCCGCGGCGGGGATCGCCC
GGCCATCGGCTCGTCGATCCAGCGGGGCAGAGCCGAGATCGCTGCTCTTCGGCCGCAACA
AGGGCACCCGTTTCCCCCGTAATTGTTCGCGCCACCTTGCTCACTCGCATTCTCTCGTTC
ATTCGTATCGGGCTGCGGTATTCAGCGATCTTACGCTCCCTCTTGGTGTGGTGATGTCTG
TAGGTGCCGTCGGCGTCGGAGGTTCTGGGTGGCGCGTGGTCATGCGCGCGGGCGGCCCGT
CCGGGGAGGTGATGATCCCTGACGGCGGTAGTGGCGGAAGCGGAACACCGCCTTCCATCG
AGGGTTCCGTTCAGTTCGAGTCTGATGATCTGGAGGTACTTGACATATACAGTACTCCGT
ATTACCCTGAGTGAAATAGAACTATTATTGCCACCGCATTTTTACGGTTCACTCGAAATA
CCTGTTAACTTGCTATGGTTTTTGCTTTCATTGAGACGTCGACTAAATTCACTGAATTCC
TATAATTTGGTAGACACCAAAATATGTGCCTTTTAGATCAAAATATTCCGGTAGTTTCAC
TCGTATACAAGAAACAAACACACAACAACAAAGCCTTTAGTCCCAAACAAGTTGGGGTAG
GCTAAAGGTGAAACTCATAAGATCTCGCGATCGATTCATGGTTTTGGCACATGGATAGCA
AGCTTCCACGCACCCCTGTTCATGGCTAGTTCTTTGGTGATGCTCCAATCCTTTAGATCT
CTTTTTATGGACTCTTTTCATATCAAGTTCGGTCTACCCCGACCTCTCTTGACATTCTCA
GCATGCTTTACCCGTCCGCTATGCACCACGGCTTCTCGAGGCCTACGCTGAATATGCCCA
AACCATCTTAGACGATGTTGGACAAGCTTCTCTTTAATTGGCGCTACCCCAACTCTATCT
CGTATATCATCATTTCGAATTTGGTCTTTCTTTGTGTGGCCACACATCCATCTCAACATG
CGTATCTCCGCCACACCTAGCTGTTGCACATGTCGCCTTTTAGTNNNNNAACACTCAGCG
CCATACAACATTGCGGGTCGAACCATCGTCTTATAGAACTTGCCTTTTAGTTTTTGTAGC
ACCCTCTTATCACAGAGAATGCCAGAAGCTTGGCGTCACTTCATCCATCCGGCTTTAATT
CGATGGTTCACATCTTCATCGATATCCCCATCCTTCTGCAACATTGAC