| Morex x Barke POPSEQ 2013 | Oregon Wolfe POPSEQ 2013 | Morex Genome Release 2012 |
|---|
 |
 |
No map location |
Predicted Genes from contig_63214
| Gene ID | # CDS Predicted | Max CDS Length | Probes in Cluster | FPKM by Treatment | FPKM by Replicate | Top Rice Hit |
|---|
| MLOC_73240 |
1 |
1412 bp |
MLOC_73240.1 |
Available |
Available |
LOC_Os03g64280.1, FRAME:-2, EVALUE:2e-127, 13103.m07142 protein 1-aminocyclopropane-1-carboxylate oxidase homolog 1, putative, expressed |
CDS Structure of MLOC_73240
Contig Sequence (4664 bp)
>contig_63214 4664 assembly3_WGSMorex_rbca.fasta
CATTCATGTAATGGCCGACCAAACAAACCGTCGGTTATAGTAATAGTTGACGGTGATCAA
ACATATCCGACGGTGATTAGACCCTCGGTTATAGGGGAATCTCTAGTAGTGAATTTTTTG
CGAAATTTAAATTTTGCATTTGGGGGCATTCATGGAGCTTGGCCCACAAAAGCAATTTAC
AGTGCCCTTGAGCCTTTTCAAATATAATATGTCAGATCCTTATACTTTAGAAATTAAAGA
TCCCTAGAATTACTCTGATCCCCTTGATTTCGTTAATAAAATGTACAGTTTATTTAGGAA
AGACACCAATGCGCATTATTAGTTTTCGTTTTTATGCCACGATGCATTAATTAGTGGCAA
CAACATATTAACTGATGGTAAATAGTTTGTTGTTTGACCAAACAGACAAAATTGGTACAC
GCATATGATTAAATATTAATTATATTTTTCGCAAAAAGAAAGAGTATCAGTTACATTGTT
TAGCAAATGCGCCTGGTAATTGTGTTGACTGATTCACGTATATGTGGTGTCCCAGATCTG
ACATGTTGTTTGATGCGTCAAATGGAAAATAGTACTCAAGAGGACCACGGACTGGATTAA
ACTATTTGAGCTTCGCATGTGCTCTCTGAGTAGTAGTACTGGTAGTCAAAATTGTGGCGT
GGACAAGACCTAGATTCTACACCTCATGTGCTCTCTGACATTGGCCTAAATACACGGGCT
GCTGCAGTGATAAGAGGGGGCAGGGAACGAAAATACCGGAAGAGCACACATCCCAAGCAC
ATGCAAACGGTTTGAATGTAGTCCACCGAGGTGCTCGGTCACAAAAACGAATTTTACTCC
ATATTATACGAATTTTGTATTATAGTTGCTATGTATTTTTTTCTTGTAAAGTTAACTTTT
AGTAAGCCCATAACACATGCTAAAAGTACGTGCGGAATATATTGCAATTTAGTGGCCCCA
TCCCAGTGAAGAGGAGAAGCAGCCAATCTCGATGATGCAGTGCAGGAGACTGGGGTAGAG
GCCAAACTGTAGGTCAGTGGGTTAAGAAACTACGGAAGAGCTCGTTACGACGACGTAGGA
GGAGCAAGCTATCTAGCCAGCTCCTGGATGGATCCGGTCATGGATTATCTAGCTCGCTCC
TGGATCCATTATGCCATGGACGAGCTAGCTGCCGGATCCAACTGGCCATGGATGAGCTAT
CTACCTCGTGGATCGACACGGGCAAGAGAAAGAAGAAGACGTGAAGAAGAATATAAGCAA
ATATTTGGTTTTTAAGGGTTATGTTTGATGGCAGCTCAAATCAACTCATAAACTATACGT
TTTGTACGAACTGAAAACCCTCCGTGGTTTGAGAGGTCTGATAGAGATGCTCTTACAGAA
GATTAGTGAAAAAAACATTTTGCAACATAGCCTTGTTGCAGAAATTAGACAAAAAAAAAG
TCACAACAAAGATACCGTTTGAAAAGTTCGCAAGTCGATATATAGATCTCGGCTGGCCTA
CGCATAGTGCGGCCTTTAACAACACCGTTCCTTTTAGTCTTGGCTCAATCCATAATCCTA
CAAATTAAAGGTGCCACTTTCGCATATGAATCAACACAAGCTTATTTTAGCAAATCCAAA
CATCTTGGGTTGCTAATGAGGCGATTGGATGAGATTCAGATCCTGAAATGCTGGAGTGCG
GAGGTACCGTCGAGGCCCTTAACCCTGTAGTGCGTGAACATCTCCTCCACCATCGTGCTC
CTGTACCGTGCGCCGCCGTCGCCGTCGATGACGATCGGCGTGAGCACCCTCTTCGACGAC
GCGCACGGCCGAATGAAGCAAGCCGCCGACACCCTTGGCCCCACGGTATTAGCCACCACG
CGGTGCTCCACGCTCTTGAACCTGTCGTTGGACATGAGCTGCAGGTAGTCGCCGACGTTG
ACCACCAACGCCCCCTCCACCGGCGGCACGTCAACCCACGCCGGACGCTGCTTGTTGCCA
TCATCGTCGACGAGCACCTGCAGACCGCCGACGTCGTCCTGGAGTAGCACGGTGAGGAAG
CTGAGGTCGGAGTGCCTGGTGGTGCCGAGCGTCAGGTGCGGCTCCGGGCACGCAGGGTAG
TAGTGGCCGCCCATGCTCAGCCGGTCCAGGCACATCGTCTCCTCCTCCAGGTAGCTTGGG
TTGAGGCCCAGCGCCTCCGACAGCAGCTCAAACAGTGTGCGGCCTAGCCGCTGCACCTGC
CGAGCGTACTCCGGCGCCACGGCCTTGCACGCCACCGGGATCTCCTCGGGCGCCGGCGGC
AGCTCGAGAAACACGGTGTCACGCCAGTTGGCCGCCGGCGAGGTGAACAGGTCGAAGTTG
GAGTTGTACCGGACGCGTCGGCGGTGGTCCCGGCTGTAGTACGGCCGCTTCGTCTCCGCC
GGAGACTCGTGGAAGCGGCGCACCGACGCGAGCATCTCGGCAAGGAGGTCGTCCGGCACG
CCGTGGTTCACCAGCTGGAAGAAGCCCACCGTCTCCGCGGCCACCTTCAGGGCGGAGACC
ATGTCAGCCCGCACGCCAGCTAACAGGTCGATGAGCGGGATGGTGAAGCGATGGGCTGGC
ACTACGACCTCGCTGCTGGGAAGGGATTCCGGCGGGTGGTGGAAGATGGACGGGACAGTG
GTGACGCCCGCGTCGACGAGGCCTTTGACGCCGGCCTTGGTGTCGTCGAACGCCTTGACG
GCACGGAGGCGCTCATGGTCATCAACGGAGGCCATGGACGGAATTTGAAGTATTGACAGA
TCCGGCTGCTTGCAAACTCTCATACTCTCACCAGGCTTAAGTAGATGGTAAGAATACATT
CGGGCCTTGGGGACATCTACCGTAATTGCCTTATATGTATGTTACTCTAACCCTCTCTCT
TTTCTTCAATTATCTATCACATCAGCATGTTTATTAGTCCCGAGTATATGATGTCGCATA
AGTTACTTTCATTATGACCAGCCTAAGGCATCTATCTACGTACCGTAGTTGACTTGCTAC
CGGACATTTGGGGGCAGGACAAAATTGCGTAGGAGCACTCGATGACAACGCTCACCGGAA
TCGTGACCGTGCAGTTGTGTTTGGATCCACGCTTACTATATTAGCCCCCAACTACTCTGC
ATACAGTACCAATTCATTCATTTAATTCATTTAGAGTGCTCCTAGTCCACATCCGGGGAC
AGGAACACTAATTACTGCCAGTGTCGAGCGAAGCAAATTGTTGACAGAAACATTTATTTT
GCAATTTATTACTCTCTTCGTTTCATACTAGTAACGTAGAAGGCTTTAGATACTACTCCC
TCCTCCGTCTTGGTTTATAAGTCATTTTAGCTTGTGCACCGCGATCAAAACGGATAGGAA
AATGAAAGAAATTAATGTTAATTTGCTAAGTACTCCCTCCGTTATGGATTAGAAGACGTG
TATGAGAGATCTTTGGGACCAAGATGAATCTTGATTGGCTCTTATTTTTTTGCAAGTGCT
CACACAATTACGAGAGGGCGCCTAATTATTTGAGAAGATCATGCATGGTAACTCACATAA
CCACTAAACGAGGAGTGCATGCAGCCTACTAGTACATCTAATTAATCAAATAGTAATTAT
CACGCGTCTTAATCCTCTTCTATTCTGGAAATGCATGTAAACGAAACCGCGTCTTCTAAA
CCGTGACGGGGGAGTAATACCATTACATGCAATGAATTGGCCACTGTATGTCGTGCTAGT
TAGTCTCAAGTCATTAAAAACATACACGCCTAGCGTCTCTTATTGGTTGATTTCTTTATT
AATGTCAAAAAACAAGAAACAGGGTGAAAGTTAATGTATCGTACCTTAGTGTTTTGGGAT
TATTTGATTTTCGTAAGATGCCTTATAAACCGAGAAGGAGGGAGTAGTGTAGTGTCAACA
ACACTTGTATATTATGAGACGAATGGAGTAACTTCTATTAGCCATGTGATGGCATAGGGT
ACTCACACTAAACATTGGCCACATCCACTCACTAGTGAAAAAGAGACCTTTCGTCCGGAC
CTTTAGTCCCAGCCGGGACTAACGTGAGCATTAGTCCCAGTTTCAATGGCTAGGAGCGGA
CGGGGGCACGGTCATCTTTAGTCTCGGTTGGTGATACCAACCTAGACTAAAGGGGTTGCG
GCAGGCTGAAGATCTTTGATATGTCTTCAATTTATCTATAATTTTTTATTGTTCCATGAT
GATATATTATCATTCTCAAATGATGGGTGGGAGCGGCGACCACGGGGCGACCTCACCTAC
CGCCATTAATGGCCGGCCATCAGCTACTAATGGCCACGCGAGCATTGCACCATCTCCTCA
CCCACCTCCCCCTCACACTTCCCCTCTCCCTGTCTAGATCCAGACTCTCCACCGTCGACG
AATCGAGCACCATGGCAGCGAAGTCGCGTCGGGGGGCAAGGGCGCGGAGGGCTCAGCCGC
CGCGGGTGTTGGCGGCGCCGAAGATGCCGCTTCTGATGCCGGTCGCGCAGTTGCCGCTGG
TAAAGATCACCCTTTATAATATGCAAACATTTTTTATAAAATTTCGTGATTCGAGGTGCT
TGATGTACGAGGTGACGCTAGCCATAGTTCGTGATTCGAATCCTGCGGTACAACTCGTAT
GCAACGTATGCATATTTTCCTGCATACTCAATGTTGATACCGTC
