Contig Data
morexGenes
Links



Map Locations of contig_63197 (3049 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_63197

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_73231 1 898 bp MLOC_73231.1 Available Available LOC_Os05g48510.1, FRAME:-3, EVALUE:9e-53, 13105.m05167 protein phenylalanyl-tRNA synthetase beta chain, putative, expressed





CDS Structure of MLOC_73231






Contig Sequence (3049 bp)

>contig_63197 3049 assembly3_WGSMorex_rbca.fasta
GCAGCTGTGTTTTGTGTGTGGCGGCTGAGTTAGGAACGGGATGGCTGGGAGCATCCTTTT
TAGGTCAGTCCCACTACATGGGCCTGGGCCCTAAGAGATAACTTGTATGGGCTGGGCCAT
ACCAGTTCAACATTTTCTTTTTTCCAAATCCCTTGTTTTGTCATTCATTTAACTCCCTGA
GTCATTTCTCCTTTTTCTGAAATGTTGTTTTATCCAGAATATGCACTAATAATGAACTTG
TTCAAACCCCGCAAAAGAAAAGTGAAGTTATTCAAGAGAGTTTCCAATTGAGACGAACAA
CAAACCCTTAGACTCTGTCTATGATTTTATCCACAGCCAATACAGAACCGTTACCAGAAG
TTAGCAAAACACCAAAGATACTCAACCTTATTGTTTTTTCTAATACTTTTTCAAGTATAC
TAATTGAAAATTTGACATATCTAGTAACATGGCCATAAGAAATTATAAAGAGCTAAATGA
GGGTAAAAATGAACCTTCCTGGTCAACCCATTACCTGTGGTCTAACATGCATCTGAAGCA
TTGAACCACGAGGGATTGGAGCAATTTTAAATACAGGGGTTGCTTCACTCCCAGTGAAAA
TGCGAAGAGATCTTGCTAATCCTTCAAGACATAACAAATCATATCTGCATGCATTGTAAT
GGACATCACACTGCATAAGAAATCTTATGCTAATTCTATGTAGTTTATCAACCAACAAGT
CATCCAATGGAACTTAATAAATTAAGAAAACATATTGTGAAAGCATAAGGCTAGCCAAGA
CATTTCCAGTGCATACTTGATGCCAGCAATACTAATAAGGTGATACTCCCATCTATAAAA
CCAGTGTACACTATTTGAAAGTTCAACGATTTGATGTCTTGTGTCACATCAGACATATAC
GAGCAAGCAGTTCTTTTTCTTTTGCTGGAAAGAAAGCAAAAGTTCTGGATGAACAGAATG
TGCTGTGTGGAATTTCAACTATTTGAAGTCTTATCTCACATCAAACATGTACAAGAAAGC
ATGTTATTATACTACATGTGTCTCACAGCATCAAATAATTTCTTACTACGCCCAAAATTA
ACAAGAGAATAGAACTAAATACAAAAGTAGCAAGACAAAATAAACTACTCCCTCAGTAAC
AAGAATTACCATCAAATATAGGAATGGTGGAGCCAAAGTTGATGTCAAATTAAATGAAAA
TCAGAGTGAACAAAATCTACACATGTTGGTTCCAAATTTGATGCCAAAACCAAAAGAATC
ACCATAAATAATGCAGGTTAGACTTGAGCTGACATTAGTACGGATAACAAGGTCAATCTC
CCCAAAGTCCAGCAATTAAGTGACAGGCATGCACGATACCCATAAACATCAAGATTTGAT
TTGCTTGCAACAACGATGTGACCCAAATAAAAGAAAACAAAGCAGTTACAGGACTACAGC
TCTGTGACACCAATTCATACACACATATTCGATTTGACAATTAGCAGCTCAATGCAGACT
AATTGAGCTAGTGATACCGAAGACGCACAGATATCTCACATCATAGCAACTCAACTCAGA
GCAGTTTAGCTACTTGTATAGACAATTCAGCTGGCAAAACCGAAATGCGATTACCTATTG
GCAGCAACCTCAATCTTGTAGATGACCTCGTCATCGCCGTCCGCTTCGATGTCTTCCACC
AGGTGCTTCTCCTTCCGGATGATGGCCTTCTCTGTGGTCTACACAAACCCAACGAAGCAA
ATCACATCAGACGAAATTAACACCCGTAGACCAAAGCATGCGAGTGTAGGAGGGGAAAAC
GGCACAGATCCGAGCGGCTCACCACATCGTCGAGTTCGATGCCGAAATCGAAGCAGAGTG
CCTCGAATTCGTCTTGCGCTGGAGCATCCACAACAAATAAACGAGATAAGTTGGGCGTTC
TCGCGGCGGGTTTAGGGAAGGAGTACGCGGCGGGGTTCAGGAAGGGGAGGGGGGACGCTT
ACTGTAGACCCTGCCGAGTGCGGCGAAGAGGCGGTCGCGACCGACGCTGACCGTCGGCAT
CGCGAGCGGCGGCGGCGGCTGCGGCGGTGTGTTGCTTGCTGGCGGCGGGACACGCGAGGA
GAACGGCGGGGGATGCCGATGAGGAGAGGGTTTGTACAGACAGGTGGGGCGCGGGGCTCA
GGGTTTTATCACGTGGAGCGCACTCGCAGTTCTTTTATCTTTCTCTCCTTCTACGATGAT
CTGACGGCCTGCTCGCGTATTGGGATTGGACAGGCCACCACTCCAAGGCCTCGTTTGGTT
AAGGAGGATTAACAAGGTTTTGAGAGCGAGGGATTTTAGGGAATTGGGTGAATCCTTTTG
TTCCATCCAATTCTATTAAATCCCTGAGGCTTTACTTTCACTAGTCTCCCGATGAGGGTT
TTGAAACACATGGATAGGAAGGGATTGTAAGGAAACGGAGGGGATTGGGCTAAACAAACC
CCTCCTACTACCAAATGGGTGCCCGAGGATTTGTGGGGTTTATGACCCTTCCAGGGATTT
TACTCTCAAAACCTCTCCAATCCCCCTTAACCAAACGAGGCCTAAAGGAAGAAAGAATTC
TTTATATAACACTACTTTAAAATCACGTTGCCTATTTGACACCGGTAAAATATTTATTCC
TTATCTATCTCCCACTCTAAAATTTGTTTCCAATATAACACTTTCGTTCGTTTTGTGAGC
AAACAACGCTAAATTGCACATGAAAGGACAATATTACCCCTATAACTAGTATATGCCATT
CTTCTAATCCTCTTTCCCATGCCTATGTGTTTTATTTTTGTTTGAAACGGTTTTGTACAA
AGCTTTGTCTAAGTACTTATACTTGGTATTGTAGAAAAAAAAACATACAATGTCAAGGTT
ACACACGTGTAGTAGCACATTACTACTTCGCTATCCATCCATGCAGGCATTGTGAGCAAG
TACTCCCTCCGTTCCTAAATATAAGACATTTTAGAGATTACAGTATAAACTACATACGGA
TGTATATAGNNNNNNNNNNNNNTGTACATTCACTCATTTTGCTCCGTAT